RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 FTCDO95954 541 aa11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 FCER1AP12319 257 aa11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 GBP2P32456 591 aaPredicted RBP11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 EIF3BP55884 814 aaKnown RBP11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 GRIK3Q13003 919 aa11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 TDRD12Q587J7 1177 aaKnown RBP11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 SFMBT2Q5VUG0 894 aa11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 GUF1Q8N442 669 aaKnown RBP11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 CCDC197Q8NCU1 140 aa11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 CHMP6Q96FZ7 201 aa11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 FAM129AQ9BZQ8 928 aa11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 TCP11L1Q9NUJ3 509 aa11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 CNOT8Q9UFF9 292 aaKnown RBP11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 SLC12A4Q9UP95 1085 aa11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 ATP6V0A2Q9Y487 856 aa11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 NEBLO76041 1014 aa11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 SSBP05455 408 aaKnown RBP eCLIP11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 E2F5Q15329 346 aa11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 TRADDQ15628 312 aa11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 SLC18A3Q16572 532 aa11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 ERMARDQ5T6L9 678 aa11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 CPLX4Q7Z7G2 160 aa11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 SDR42E1Q8WUS8 393 aa11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 SEC14L1Q92503 715 aa11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 XPO6Q96QU8 1125 aaKnown RBP11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 PSMD1Q99460 953 aa11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 RIOK1Q9BRS2 568 aaKnown RBP11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 LRP2BPQ9P2M1 347 aa11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 LAMB2P55268 1798 aa11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 KIAA1551Q9HCM1 1747 aa11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 COL1A1P02452 1464 aaPredicted RBP11.52□□□□□ -0.56
LYSMD1-201ENST00000368908 NKRFO15226 690 aaKnown RBP eCLIP11.52□□□□□ -0.56
LYSMD1-201ENST00000368908 ASAP2O43150 1006 aa11.52□□□□□ -0.56
LYSMD1-201ENST00000368908 KLRC1P26715 233 aa11.52□□□□□ -0.56
LYSMD1-201ENST00000368908 TMOD1P28289 359 aa11.52□□□□□ -0.56
LYSMD1-201ENST00000368908 USP11P51784 963 aa11.52□□□□□ -0.56
LYSMD1-201ENST00000368908 ICA1Q05084 483 aa11.52□□□□□ -0.56
LYSMD1-201ENST00000368908 IFI16Q16666 785 aaKnown RBP11.52□□□□□ -0.56
LYSMD1-201ENST00000368908 C10orf76Q5T2E6 689 aa11.52□□□□□ -0.56
LYSMD1-201ENST00000368908 LRRC55Q6ZSA7 311 aa11.52□□□□□ -0.56
LYSMD1-201ENST00000368908 SLITRK6Q9H5Y7 841 aa11.52□□□□□ -0.56
LYSMD1-201ENST00000368908 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.52□□□□□ -0.56
LYSMD1-201ENST00000368908 FBXL5Q9UKA1 691 aa11.52□□□□□ -0.56
LYSMD1-201ENST00000368908 NOVA2Q9UNW9 492 aaKnown RBP11.52□□□□□ -0.56
LYSMD1-201ENST00000368908 F8W031 263 aaPredicted RBP11.52□□□□□ -0.57
LYSMD1-201ENST00000368908 OPLAHO14841 1288 aa11.52□□□□□ -0.57
LYSMD1-201ENST00000368908 NT5C2P49902 561 aa11.52□□□□□ -0.57
LYSMD1-201ENST00000368908 ORC2Q13416 577 aaPredicted RBP11.52□□□□□ -0.57
LYSMD1-201ENST00000368908 RPS6KA1Q15418 735 aa11.52□□□□□ -0.57
LYSMD1-201ENST00000368908 ODF2Q5BJF6 829 aa11.52□□□□□ -0.57
LYSMD1-201ENST00000368908 UNC13DQ70J99 1090 aa11.52□□□□□ -0.57
LYSMD1-201ENST00000368908 TMC3Q7Z5M5 1100 aa11.52□□□□□ -0.57
LYSMD1-201ENST00000368908 KLHL7Q8IXQ5 586 aa11.52□□□□□ -0.57
LYSMD1-201ENST00000368908 ANKS4BQ8N8V4 417 aa11.52□□□□□ -0.57
LYSMD1-201ENST00000368908 EEF2KMTQ96G04 330 aa11.52□□□□□ -0.57
LYSMD1-201ENST00000368908 PCDHA6Q9UN73 950 aa11.52□□□□□ -0.57
LYSMD1-201ENST00000368908 PCDHA8Q9Y5H6 950 aa11.52□□□□□ -0.57
LYSMD1-201ENST00000368908 BAZ2BQ9UIF8 2168 aaKnown RBP11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 PGRMC1O00264 195 aaKnown RBP11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 TLR2O60603 784 aa11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 KIF4AO95239 1232 aa11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 OR52Z1P0C646 297 aa11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 EHHADHQ08426 723 aa11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 KCNMA1Q12791 1236 aa11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 NAA25Q14CX7 972 aa11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 SMIM5Q71RC9 77 aa11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 TMC4Q7Z404 712 aa11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 CCDC63Q8NA47 563 aa11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 HELBQ8NG08 1087 aaPredicted RBP11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 OR2W6PQ8NHA6 318 aa11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 UBLCP1Q8WVY7 318 aaPredicted RBP11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 SLC4A9Q96Q91 983 aa11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 PLIN2Q99541 437 aa11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 RIC8AQ9NPQ8 531 aa11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 FAM114A2Q9NRY5 505 aa11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 STK17AQ9UEE5 414 aa11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 C15orf41Q9Y2V0 281 aa11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 CNTNAP4Q9C0A0 1308 aa11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 SCN7AQ01118 1682 aa11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 F8VZ95 297 aa11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 BUB1BO60566 1050 aaPredicted RBP11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 ALADP13716 330 aa11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 MAGOHP61326 146 aaKnown RBP11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 RC3H1Q5TC82 1133 aaKnown RBP11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 ADGRA1Q86SQ6 560 aa11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 HOOK3Q86VS8 718 aa11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 ANKS1AQ92625 1134 aa11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 MAGOHBQ96A72 148 aaKnown RBP11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 ZNF317Q96PQ6 595 aaPredicted RBP11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 TSG101Q99816 390 aa11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 LRRC4BQ9NT99 713 aa11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 TRMT112Q9UI30 125 aaKnown RBP11.51□□□□□ -0.57
LYSMD1-201ENST00000368908 UBR3Q6ZT12 1888 aa11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 TULP1O00294 542 aaPredicted RBP11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 LIN7AO14910 233 aaPredicted RBP11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 ZBTB48P10074 688 aaPredicted RBP11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 VEGFAP15692 232 aaPredicted RBP11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 KRT71Q3SY84 523 aa11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 FAM83BQ5T0W9 1011 aa11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 HIBCHQ6NVY1 386 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms