RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 GGCXP38435 758 aa15.73■□□□□ 0.11
CD48-201ENST00000368045 EPS15P42566 896 aa15.73■□□□□ 0.11
CD48-201ENST00000368045 ADAM9Q13443 819 aa15.73■□□□□ 0.11
CD48-201ENST00000368045 ASIC2Q16515 512 aa15.73■□□□□ 0.11
CD48-201ENST00000368045 APOBEC3HQ6NTF7 200 aaKnown RBP15.73■□□□□ 0.11
CD48-201ENST00000368045 TEX2Q8IWB9 1127 aa15.73■□□□□ 0.11
CD48-201ENST00000368045 CRYGNQ8WXF5 182 aa15.73■□□□□ 0.11
CD48-201ENST00000368045 GANQ9H2C0 597 aa15.73■□□□□ 0.11
CD48-201ENST00000368045 TRAF3IP3Q9Y228 551 aa15.73■□□□□ 0.11
CD48-201ENST00000368045 PCDHGC5Q9Y5F6 944 aa15.73■□□□□ 0.11
CD48-201ENST00000368045 BZW2Q9Y6E2 419 aaKnown RBP15.73■□□□□ 0.11
CD48-201ENST00000368045 OPA1O60313 960 aa15.72■□□□□ 0.11
CD48-201ENST00000368045 CDC37Q16543 378 aaPredicted RBP15.72■□□□□ 0.11
CD48-201ENST00000368045 SLFN13Q68D06 897 aa15.72■□□□□ 0.11
CD48-201ENST00000368045 C8orf74Q6P047 294 aa15.72■□□□□ 0.11
CD48-201ENST00000368045 SND1Q7KZF4 910 aaKnown RBP eCLIP15.72■□□□□ 0.11
CD48-201ENST00000368045 NELFCDQ8IXH7 590 aa15.72■□□□□ 0.11
CD48-201ENST00000368045 FAM76AQ8TAV0 307 aa15.72■□□□□ 0.11
CD48-201ENST00000368045 ETNPPLQ8TBG4 499 aa15.72■□□□□ 0.11
CD48-201ENST00000368045 FAM20AQ96MK3 541 aa15.72■□□□□ 0.11
CD48-201ENST00000368045 DMGDHQ9UI17 866 aaKnown RBP15.72■□□□□ 0.11
CD48-201ENST00000368045 USP17L15C9J2P7 530 aa15.72■□□□□ 0.11
CD48-201ENST00000368045 USP17L13C9JLJ4 530 aa15.72■□□□□ 0.11
CD48-201ENST00000368045 USP17L11C9JVI0 530 aa15.72■□□□□ 0.11
CD48-201ENST00000368045 USP17L18D6R9N7 530 aa15.72■□□□□ 0.11
CD48-201ENST00000368045 USP17L22D6RA61 530 aa15.72■□□□□ 0.11
CD48-201ENST00000368045 USP17L17D6RBQ6 530 aa15.72■□□□□ 0.11
CD48-201ENST00000368045 USP17L19D6RCP7 530 aa15.72■□□□□ 0.11
CD48-201ENST00000368045 USP17L20D6RJB6 530 aa15.72■□□□□ 0.11
CD48-201ENST00000368045 SHOX2O60902 331 aaPredicted RBP15.72■□□□□ 0.11
CD48-201ENST00000368045 MED24O75448 989 aa15.72■□□□□ 0.11
CD48-201ENST00000368045 NPM3O75607 178 aaKnown RBP15.72■□□□□ 0.11
CD48-201ENST00000368045 EPB41P11171 864 aaKnown RBP15.72■□□□□ 0.11
CD48-201ENST00000368045 RPA1P27694 616 aa15.72■□□□□ 0.11
CD48-201ENST00000368045 NAP1L1P55209 391 aaKnown RBP15.72■□□□□ 0.11
CD48-201ENST00000368045 ARHGAP4P98171 946 aa15.72■□□□□ 0.11
CD48-201ENST00000368045 KLHL30Q0D2K2 578 aa15.72■□□□□ 0.11
CD48-201ENST00000368045 USP17L24Q0WX57 530 aa15.72■□□□□ 0.11
CD48-201ENST00000368045 ARSHQ5FYA8 562 aa15.72■□□□□ 0.11
CD48-201ENST00000368045 USP17L6PQ6QN14 398 aa15.72■□□□□ 0.11
CD48-201ENST00000368045 GBP6Q6ZN66 633 aa15.72■□□□□ 0.11
CD48-201ENST00000368045 IFT20Q8IY31 132 aa15.72■□□□□ 0.11
CD48-201ENST00000368045 GSPT2Q8IYD1 628 aaKnown RBP15.72■□□□□ 0.11
CD48-201ENST00000368045 ZDHHC15Q96MV8 337 aa15.72■□□□□ 0.11
CD48-201ENST00000368045 SH3GL2Q99962 352 aa15.72■□□□□ 0.11
CD48-201ENST00000368045 FGFBP2Q9BYJ0 223 aa15.72■□□□□ 0.11
CD48-201ENST00000368045 DNM3Q9UQ16 869 aa15.72■□□□□ 0.11
CD48-201ENST00000368045 NCK2O43639 380 aa15.71■□□□□ 0.11
CD48-201ENST00000368045 CALUO43852 315 aaPredicted RBP15.71■□□□□ 0.11
CD48-201ENST00000368045 NPR1P16066 1061 aa15.71■□□□□ 0.11
CD48-201ENST00000368045 MMP14P50281 582 aa15.71■□□□□ 0.11
CD48-201ENST00000368045 FKBP1AP62942 108 aaKnown RBP15.71■□□□□ 0.11
CD48-201ENST00000368045 IRX5P78411 483 aaPredicted RBP15.71■□□□□ 0.11
CD48-201ENST00000368045 APBA1Q02410 837 aa15.71■□□□□ 0.11
CD48-201ENST00000368045 SPIRE1Q08AE8 756 aa15.71■□□□□ 0.11
CD48-201ENST00000368045 KCNH2Q12809 1159 aa15.71■□□□□ 0.11
CD48-201ENST00000368045 PPFIA1Q13136 1202 aa15.71■□□□□ 0.11
CD48-201ENST00000368045 RAPGEF1Q13905 1077 aa15.71■□□□□ 0.11
CD48-201ENST00000368045 EZH2Q15910 746 aaKnown RBP15.71■□□□□ 0.11
CD48-201ENST00000368045 BMT2Q1RMZ1 405 aa15.71■□□□□ 0.11
CD48-201ENST00000368045 MEI1Q5TIA1 1274 aa15.71■□□□□ 0.11
CD48-201ENST00000368045 LRRC31Q6UY01 552 aa15.71■□□□□ 0.11
CD48-201ENST00000368045 EPM2AIP1Q7L775 607 aaPredicted RBP15.71■□□□□ 0.11
CD48-201ENST00000368045 ANKRD13CQ8N6S4 541 aa15.71■□□□□ 0.11
CD48-201ENST00000368045 SYT2Q8N9I0 419 aaPredicted RBP15.71■□□□□ 0.11
CD48-201ENST00000368045 HDAC7Q8WUI4 952 aa15.71■□□□□ 0.11
CD48-201ENST00000368045 TBC1D5Q92609 795 aa15.71■□□□□ 0.11
CD48-201ENST00000368045 GJA10Q969M2 543 aa15.71■□□□□ 0.11
CD48-201ENST00000368045 AMNQ9BXJ7 453 aa15.71■□□□□ 0.11
CD48-201ENST00000368045 TBC1D7Q9P0N9 293 aa15.71■□□□□ 0.11
CD48-201ENST00000368045 NPHP3-ACAD11A0A0J9YXS1 232 aa15.7■□□□□ 0.1
CD48-201ENST00000368045 GOLGA6CA6NDK9 693 aa15.7■□□□□ 0.1
CD48-201ENST00000368045 A6NNZ2 444 aa15.7■□□□□ 0.1
CD48-201ENST00000368045 PDXKO00764 312 aa15.7■□□□□ 0.1
CD48-201ENST00000368045 MEIS2O14770 477 aa15.7■□□□□ 0.1
CD48-201ENST00000368045 SLC16A3O15427 465 aaKnown RBP15.7■□□□□ 0.1
CD48-201ENST00000368045 BUB1O43683 1085 aa15.7■□□□□ 0.1
CD48-201ENST00000368045 PALMO75781 387 aa15.7■□□□□ 0.1
CD48-201ENST00000368045 AFPP02771 609 aaKnown RBP15.7■□□□□ 0.1
CD48-201ENST00000368045 GOLGA6DP0CG33 693 aa15.7■□□□□ 0.1
CD48-201ENST00000368045 EEF2P13639 858 aaKnown RBP15.7■□□□□ 0.1
CD48-201ENST00000368045 NR2F2P24468 414 aa15.7■□□□□ 0.1
CD48-201ENST00000368045 CRKP46108 304 aa15.7■□□□□ 0.1
CD48-201ENST00000368045 SCNN1DP51172 638 aa15.7■□□□□ 0.1
CD48-201ENST00000368045 HDLBPQ00341 1268 aaKnown RBP15.7■□□□□ 0.1
CD48-201ENST00000368045 SLC20A2Q08357 652 aa15.7■□□□□ 0.1
CD48-201ENST00000368045 GIT2Q14161 759 aa15.7■□□□□ 0.1
CD48-201ENST00000368045 IFI16Q16666 785 aaKnown RBP15.7■□□□□ 0.1
CD48-201ENST00000368045 KNOP1Q1ED39 458 aaKnown RBP15.7■□□□□ 0.1
CD48-201ENST00000368045 TUBB8Q3ZCM7 444 aa15.7■□□□□ 0.1
CD48-201ENST00000368045 CERKLQ49MI3 558 aaPredicted RBP15.7■□□□□ 0.1
CD48-201ENST00000368045 GMCL1P1Q8NEA9 526 aa15.7■□□□□ 0.1
CD48-201ENST00000368045 GMCL1Q96IK5 515 aa15.7■□□□□ 0.1
CD48-201ENST00000368045 IDI2Q9BXS1 227 aa15.7■□□□□ 0.1
CD48-201ENST00000368045 METTL14Q9HCE5 456 aaKnown RBP15.7■□□□□ 0.1
CD48-201ENST00000368045 RBM12Q9NTZ6 932 aaKnown RBP15.7■□□□□ 0.1
CD48-201ENST00000368045 GOLGA6AQ9NYA3 693 aa15.7■□□□□ 0.1
CD48-201ENST00000368045 PI4KBQ9UBF8 816 aa15.7■□□□□ 0.1
CD48-201ENST00000368045 ARMCX3Q9UH62 379 aaPredicted RBP15.7■□□□□ 0.1
CD48-201ENST00000368045 FBXL5Q9UKA1 691 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms