RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 PPP1R12BO60237 982 aaPredicted RBP15.51■□□□□ 0.07
USF1-202ENST00000368020 TADA3O75528 432 aa15.51■□□□□ 0.07
USF1-202ENST00000368020 POTEIP0CG38 1075 aa15.51■□□□□ 0.07
USF1-202ENST00000368020 POTEJP0CG39 1038 aa15.51■□□□□ 0.07
USF1-202ENST00000368020 CYP11B2P19099 503 aa15.51■□□□□ 0.07
USF1-202ENST00000368020 JAG1P78504 1218 aa15.51■□□□□ 0.07
USF1-202ENST00000368020 PPP2R3AQ06190 1150 aa15.51■□□□□ 0.07
USF1-202ENST00000368020 RRP1BQ14684 758 aaKnown RBP15.51■□□□□ 0.07
USF1-202ENST00000368020 FAM83BQ5T0W9 1011 aa15.51■□□□□ 0.07
USF1-202ENST00000368020 PRAMEF18Q5VWM3 479 aa15.51■□□□□ 0.07
USF1-202ENST00000368020 SAMD3Q8N6K7 520 aa15.51■□□□□ 0.07
USF1-202ENST00000368020 KLRG1Q96E93 195 aa15.51■□□□□ 0.07
USF1-202ENST00000368020 TSGA10Q9BZW7 698 aa15.51■□□□□ 0.07
USF1-202ENST00000368020 TUFT1Q9NNX1 390 aa15.51■□□□□ 0.07
USF1-202ENST00000368020 SSC5DA1L4H1 1573 aa15.51■□□□□ 0.07
USF1-202ENST00000368020 EIF3CLB5ME19 914 aaKnown RBP15.51■□□□□ 0.07
USF1-202ENST00000368020 E9PMD0 336 aa15.51■□□□□ 0.07
USF1-202ENST00000368020 FAM86B1E9PN63 330 aa15.51■□□□□ 0.07
USF1-202ENST00000368020 OPLAHO14841 1288 aa15.51■□□□□ 0.07
USF1-202ENST00000368020 KRT86O43790 486 aa15.51■□□□□ 0.07
USF1-202ENST00000368020 MED24O75448 989 aa15.51■□□□□ 0.07
USF1-202ENST00000368020 FAM86B2P0C5J1 330 aa15.51■□□□□ 0.07
USF1-202ENST00000368020 HERC4Q5GLZ8 1057 aaPredicted RBP15.51■□□□□ 0.07
USF1-202ENST00000368020 ZNF569Q5MCW4 686 aa15.51■□□□□ 0.07
USF1-202ENST00000368020 NCAPH2Q6IBW4 605 aa15.51■□□□□ 0.07
USF1-202ENST00000368020 CATSPER3Q86XQ3 398 aa15.51■□□□□ 0.07
USF1-202ENST00000368020 SPICE1Q8N0Z3 855 aa15.51■□□□□ 0.07
USF1-202ENST00000368020 LPAR1Q92633 364 aa15.51■□□□□ 0.07
USF1-202ENST00000368020 CDCA5Q96FF9 252 aa15.51■□□□□ 0.07
USF1-202ENST00000368020 EIF3CQ99613 913 aaKnown RBP15.51■□□□□ 0.07
USF1-202ENST00000368020 NAPGQ99747 312 aaPredicted RBP15.51■□□□□ 0.07
USF1-202ENST00000368020 GLIS2Q9BZE0 524 aaPredicted RBP15.51■□□□□ 0.07
USF1-202ENST00000368020 MSH4O15457 936 aa15.5■□□□□ 0.07
USF1-202ENST00000368020 GAP43P17677 238 aa15.5■□□□□ 0.07
USF1-202ENST00000368020 ECE1P42892 770 aa15.5■□□□□ 0.07
USF1-202ENST00000368020 ZC3H3Q8IXZ2 948 aaKnown RBP15.5■□□□□ 0.07
USF1-202ENST00000368020 GPR161Q8N6U8 529 aaKnown RBP15.5■□□□□ 0.07
USF1-202ENST00000368020 ACRBPQ8NEB7 543 aa15.5■□□□□ 0.07
USF1-202ENST00000368020 HPS3Q969F9 1004 aa15.5■□□□□ 0.07
USF1-202ENST00000368020 CARD6Q9BX69 1037 aa15.5■□□□□ 0.07
USF1-202ENST00000368020 WDR11Q9BZH6 1224 aa15.5■□□□□ 0.07
USF1-202ENST00000368020 CDC23Q9UJX2 597 aa15.5■□□□□ 0.07
USF1-202ENST00000368020 VAV3Q9UKW4 847 aa15.5■□□□□ 0.07
USF1-202ENST00000368020 PLAGL2Q9UPG8 496 aa15.5■□□□□ 0.07
USF1-202ENST00000368020 PCDHA2Q9Y5H9 948 aa15.5■□□□□ 0.07
USF1-202ENST00000368020 RBBP6Q7Z6E9 1792 aaKnown RBP15.5■□□□□ 0.07
USF1-202ENST00000368020 POTEB2H3BUK9 544 aa15.49■□□□□ 0.07
USF1-202ENST00000368020 RNF225M0QZC1 329 aaPredicted RBP15.49■□□□□ 0.07
USF1-202ENST00000368020 TRAF5O00463 557 aa15.49■□□□□ 0.07
USF1-202ENST00000368020 FANCGO15287 622 aa15.49■□□□□ 0.07
USF1-202ENST00000368020 USP2O75604 605 aaPredicted RBP15.49■□□□□ 0.07
USF1-202ENST00000368020 EYA4O95677 639 aa15.49■□□□□ 0.07
USF1-202ENST00000368020 H2AFXP16104 143 aaPredicted RBP15.49■□□□□ 0.07
USF1-202ENST00000368020 PPP2R5CQ13362 524 aa15.49■□□□□ 0.07
USF1-202ENST00000368020 ERCC6LQ2NKX8 1250 aa15.49■□□□□ 0.07
USF1-202ENST00000368020 CCDC40Q4G0X9 1142 aa15.49■□□□□ 0.07
USF1-202ENST00000368020 MAP1SQ66K74 1059 aaPredicted RBP15.49■□□□□ 0.07
USF1-202ENST00000368020 ACER1Q8TDN7 264 aa15.49■□□□□ 0.07
USF1-202ENST00000368020 ZNF526Q8TF50 670 aaPredicted RBP15.49■□□□□ 0.07
USF1-202ENST00000368020 RABGGTAQ92696 567 aa15.49■□□□□ 0.07
USF1-202ENST00000368020 GOLGA1Q92805 767 aa15.49■□□□□ 0.07
USF1-202ENST00000368020 SLF1Q9BQI6 1058 aa15.49■□□□□ 0.07
USF1-202ENST00000368020 GPBP1L1Q9HC44 474 aaPredicted RBP15.49■□□□□ 0.07
USF1-202ENST00000368020 EMILIN3Q9NT22 766 aa15.49■□□□□ 0.07
USF1-202ENST00000368020 MAP3K20Q9NYL2 800 aaKnown RBP15.49■□□□□ 0.07
USF1-202ENST00000368020 OGFRQ9NZT2 677 aa15.49■□□□□ 0.07
USF1-202ENST00000368020 KCND2Q9NZV8 630 aa15.49■□□□□ 0.07
USF1-202ENST00000368020 SIK3Q9Y2K2 1263 aa15.49■□□□□ 0.07
USF1-202ENST00000368020 IGLV3-22A0A075B6J6 115 aa15.48■□□□□ 0.07
USF1-202ENST00000368020 POTEFA5A3E0 1075 aa15.48■□□□□ 0.07
USF1-202ENST00000368020 UNCXA6NJT0 531 aa15.48■□□□□ 0.07
USF1-202ENST00000368020 CFBP00751 764 aa15.48■□□□□ 0.07
USF1-202ENST00000368020 SPATA31C1P0DKV0 1188 aa15.48■□□□□ 0.07
USF1-202ENST00000368020 HOXA13P31271 388 aaPredicted RBP15.48■□□□□ 0.07
USF1-202ENST00000368020 SNAP25P60880 206 aa15.48■□□□□ 0.07
USF1-202ENST00000368020 SPA17Q15506 151 aa15.48■□□□□ 0.07
USF1-202ENST00000368020 WHAMMP3Q1A5X7 153 aa15.48■□□□□ 0.07
USF1-202ENST00000368020 NOL9Q5SY16 702 aaKnown RBP15.48■□□□□ 0.07
USF1-202ENST00000368020 WDR59Q6PJI9 974 aa15.48■□□□□ 0.07
USF1-202ENST00000368020 POTEGQ6S5H5 508 aa15.48■□□□□ 0.07
USF1-202ENST00000368020 POTEEQ6S8J3 1075 aa15.48■□□□□ 0.07
USF1-202ENST00000368020 KIAA1328Q86T90 577 aa15.48■□□□□ 0.07
USF1-202ENST00000368020 NEK11Q8NG66 645 aa15.48■□□□□ 0.07
USF1-202ENST00000368020 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.48■□□□□ 0.077e-6■□□□□ 9.2
USF1-202ENST00000368020 WRNIP1Q96S55 665 aa15.48■□□□□ 0.07
USF1-202ENST00000368020 CHP1Q99653 195 aa15.48■□□□□ 0.07
USF1-202ENST00000368020 CETN3O15182 167 aa15.48■□□□□ 0.07
USF1-202ENST00000368020 WDR46O15213 610 aaKnown RBP15.48■□□□□ 0.07
USF1-202ENST00000368020 TBCAO75347 108 aaKnown RBP15.48■□□□□ 0.07
USF1-202ENST00000368020 TUBBP07437 444 aa15.48■□□□□ 0.07
USF1-202ENST00000368020 STAT3P40763 770 aa15.48■□□□□ 0.07
USF1-202ENST00000368020 ARHGAP25P42331 645 aa15.48■□□□□ 0.07
USF1-202ENST00000368020 IREB2P48200 963 aaKnown RBP15.48■□□□□ 0.07
USF1-202ENST00000368020 NAA30Q147X3 362 aaPredicted RBP15.48■□□□□ 0.07
USF1-202ENST00000368020 LRCH2Q5VUJ6 765 aa15.48■□□□□ 0.07
USF1-202ENST00000368020 CHADLQ6NUI6 762 aa15.48■□□□□ 0.07
USF1-202ENST00000368020 SRGAP1Q7Z6B7 1085 aa15.48■□□□□ 0.07
USF1-202ENST00000368020 MCF2L2Q86YR7 1114 aa15.48■□□□□ 0.07
USF1-202ENST00000368020 SCYL3Q8IZE3 742 aa15.48■□□□□ 0.07
USF1-202ENST00000368020 NEK9Q8TD19 979 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms