RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 CDK8P49336 464 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 CYB5R4Q7L1T6 521 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 ANKRD35Q8N283 1001 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.76□□□□□ -0.85
SYNE1-205ENST00000367251 PI4KBQ9UBF8 816 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 FAN1Q9Y2M0 1017 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 DDIT3P35638 169 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 ATP1A2P50993 1020 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 SDCCAG8Q86SQ7 713 aaPredicted RBP9.76□□□□□ -0.85
SYNE1-205ENST00000367251 RASGRP4Q8TDF6 673 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 GJA10Q969M2 543 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 MAGOHBQ96A72 148 aaKnown RBP9.76□□□□□ -0.85
SYNE1-205ENST00000367251 PARVGQ9HBI0 331 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 INTS9Q9NV88 658 aaKnown RBP9.76□□□□□ -0.85
SYNE1-205ENST00000367251 NUB1Q9Y5A7 615 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 UTYO14607 1347 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 MOCS3O95396 460 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 PIK3CAP42336 1068 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 GOLGA8FQ08AF8 430 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 GOLGA8DPQ0D2H9 430 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 SURF1Q15526 300 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 CASC4Q6P4E1 433 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 RPS6KC1Q96S38 1066 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 AP5M1Q9H0R1 490 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 AGLP35573 1532 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 DIP2CQ9Y2E4 1556 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 MAP2K2P36507 400 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 KCNB1Q14721 858 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 ARHGEF18Q6ZSZ5 1173 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 DACT3Q96B18 629 aaPredicted RBP9.76□□□□□ -0.85
SYNE1-205ENST00000367251 RNF8O76064 485 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 C2orf54Q08AI8 447 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 SESTD1Q86VW0 696 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 GCNT4Q9P109 453 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 BAIAP2L1Q9UHR4 511 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 GOLGA8QA0A0J9YX86 632 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 GOLGA8OA6NCC3 632 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 MIF4GDA9UHW6 222 aaKnown RBP9.75□□□□□ -0.85
SYNE1-205ENST00000367251 GOLGA8NF8WBI6 632 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 Q3C1V9 767 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 SH2D4BQ5SQS7 431 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 NCAPG2Q86XI2 1143 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 CCDC24Q8N4L8 307 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 LRRC8CQ8TDW0 803 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 POMGNT1Q8WZA1 660 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 N4BP2L2Q92802 583 aaPredicted RBP9.75□□□□□ -0.85
SYNE1-205ENST00000367251 ABCB6Q9NP58 842 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 KAT6BQ8WYB5 2073 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 CLGNO14967 610 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 GARSP41250 739 aaKnown RBP9.75□□□□□ -0.85
SYNE1-205ENST00000367251 CCT5P48643 541 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 POLGP54098 1239 aaPredicted RBP9.75□□□□□ -0.85
SYNE1-205ENST00000367251 TERF2Q15554 542 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 MIS18BP1Q6P0N0 1132 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 AIFM3Q96NN9 605 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 ADPGKQ9BRR6 497 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 POLIQ9UNA4 740 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 OVOS2A0A0G2JMS6 1433 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 UBN2Q6ZU65 1347 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 TARSL2A2RTX5 802 aaKnown RBP9.75□□□□□ -0.85
SYNE1-205ENST00000367251 PODXLO00592 558 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 PLEKHA8P1O95397 391 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 SERPINB2P05120 415 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 FBXW4P57775 412 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 CC2D1AQ6P1N0 951 aaPredicted RBP9.75□□□□□ -0.85
SYNE1-205ENST00000367251 FAM133AQ8N9E0 248 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 ITIH6Q6UXX5 1313 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 MAPK4P31152 587 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 CCNA1P78396 465 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 ADCY2Q08462 1091 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 NNTQ13423 1086 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 RBBP5Q15291 538 aaKnown RBP9.75□□□□□ -0.85
SYNE1-205ENST00000367251 C6orf118Q5T5N4 469 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 NEK9Q8TD19 979 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 RAD54LQ92698 747 aa9.75□□□□□ -0.85
SYNE1-205ENST00000367251 MRRFQ96E11 262 aaKnown RBP9.75□□□□□ -0.85
SYNE1-205ENST00000367251 CPSF2Q9P2I0 782 aaKnown RBP9.75□□□□□ -0.85
SYNE1-205ENST00000367251 MORC2Q9Y6X9 1032 aaPredicted RBP9.75□□□□□ -0.85
SYNE1-205ENST00000367251 USP17L8P0C7I0 530 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 TMEM191BP0C7N4 346 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 SCNN1DP51172 638 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 STAT2P52630 851 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 BSPRYQ5W0U4 402 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 MORC4Q8TE76 937 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 CDKL2Q92772 493 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 ZNF653Q96CK0 615 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 GCNAQ96QF7 691 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 ST7Q9NRC1 585 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 ZBBXA8MT70 800 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 MED7O43513 233 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 CCND2P30279 289 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 ELF1P32519 619 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 TOGARAM2Q6ZUX3 1019 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 ANKRD13CQ8N6S4 541 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 HESX1Q9UBX0 185 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 MOSPD1Q9UJG1 213 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 RPS6KA4O75676 772 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 ANXA13P27216 316 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 ATP2C1P98194 919 aaPredicted RBP9.74□□□□□ -0.85
SYNE1-205ENST00000367251 KRT33BQ14525 404 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms