RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 ORC4O43929 436 aa17.94■□□□□ 0.46
SCAF8-201ENST00000367178 GABPB1Q06547 395 aaPredicted RBP17.94■□□□□ 0.46
SCAF8-201ENST00000367178 CUL4BQ13620 913 aa17.94■□□□□ 0.46
SCAF8-201ENST00000367178 PPP1R18Q6NYC8 613 aa17.94■□□□□ 0.46
SCAF8-201ENST00000367178 BBOF1Q8ND07 529 aa17.94■□□□□ 0.46
SCAF8-201ENST00000367178 RAVER2Q9HCJ3 691 aaKnown RBP17.94■□□□□ 0.46
SCAF8-201ENST00000367178 PFDN4Q9NQP4 134 aa17.94■□□□□ 0.46
SCAF8-201ENST00000367178 H7C0C1 242 aa17.94■□□□□ 0.46
SCAF8-201ENST00000367178 EIF4A3P38919 411 aaKnown RBP17.94■□□□□ 0.46
SCAF8-201ENST00000367178 ATP5OP48047 213 aa17.94■□□□□ 0.46
SCAF8-201ENST00000367178 PEX3P56589 373 aa17.94■□□□□ 0.46
SCAF8-201ENST00000367178 OSTNP61366 133 aa17.94■□□□□ 0.46
SCAF8-201ENST00000367178 KRT31Q15323 416 aa17.94■□□□□ 0.46
SCAF8-201ENST00000367178 VPS72Q15906 364 aa17.94■□□□□ 0.46
SCAF8-201ENST00000367178 CAPN12Q6ZSI9 719 aa17.94■□□□□ 0.46
SCAF8-201ENST00000367178 CCDC170Q8IYT3 715 aa17.94■□□□□ 0.46
SCAF8-201ENST00000367178 ACRBPQ8NEB7 543 aa17.94■□□□□ 0.46
SCAF8-201ENST00000367178 PTPRMP28827 1452 aa17.94■□□□□ 0.46
SCAF8-201ENST00000367178 SRGAP2CP0DJJ0 459 aa17.94■□□□□ 0.46
SCAF8-201ENST00000367178 JAK3P52333 1124 aa17.94■□□□□ 0.46
SCAF8-201ENST00000367178 ZNF131P52739 623 aa17.94■□□□□ 0.46
SCAF8-201ENST00000367178 ARHGAP4P98171 946 aa17.94■□□□□ 0.46
SCAF8-201ENST00000367178 TCP11X2Q5H9J9 407 aa17.94■□□□□ 0.46
SCAF8-201ENST00000367178 SPATA24Q86W54 205 aa17.94■□□□□ 0.46
SCAF8-201ENST00000367178 TAB3Q8N5C8 712 aaPredicted RBP17.94■□□□□ 0.46
SCAF8-201ENST00000367178 GSDMBQ8TAX9 411 aa17.94■□□□□ 0.46
SCAF8-201ENST00000367178 UBN2Q6ZU65 1347 aa17.94■□□□□ 0.46
SCAF8-201ENST00000367178 SFI1A8K8P3 1242 aa17.94■□□□□ 0.46
SCAF8-201ENST00000367178 GOLGA8SH3BPF8 625 aa17.94■□□□□ 0.46
SCAF8-201ENST00000367178 SF3B3Q15393 1217 aaKnown RBP17.94■□□□□ 0.46
SCAF8-201ENST00000367178 SDCCAG8Q86SQ7 713 aaPredicted RBP17.94■□□□□ 0.46
SCAF8-201ENST00000367178 ZNF34Q8IZ26 560 aa17.94■□□□□ 0.46
SCAF8-201ENST00000367178 RABGGTAQ92696 567 aa17.94■□□□□ 0.46
SCAF8-201ENST00000367178 SPP2Q13103 211 aa17.93■□□□□ 0.46
SCAF8-201ENST00000367178 UHMK1Q8TAS1 419 aaKnown RBP17.93■□□□□ 0.46
SCAF8-201ENST00000367178 HINFPQ9BQA5 517 aa17.93■□□□□ 0.46
SCAF8-201ENST00000367178 SNX25Q9H3E2 840 aa17.93■□□□□ 0.46
SCAF8-201ENST00000367178 SEPT10Q9P0V9 454 aa17.93■□□□□ 0.46
SCAF8-201ENST00000367178 MARK3P27448 753 aa17.93■□□□□ 0.46
SCAF8-201ENST00000367178 KIF11P52732 1056 aa17.93■□□□□ 0.46
SCAF8-201ENST00000367178 SF3A3Q12874 501 aaKnown RBP eCLIP17.93■□□□□ 0.46
SCAF8-201ENST00000367178 RINT1Q6NUQ1 792 aa17.93■□□□□ 0.46
SCAF8-201ENST00000367178 CAMSAP1Q5T5Y3 1602 aa17.93■□□□□ 0.46
SCAF8-201ENST00000367178 SOWAHDA6NJG2 315 aa17.93■□□□□ 0.46
SCAF8-201ENST00000367178 QRICH1Q2TAL8 776 aa17.93■□□□□ 0.46
SCAF8-201ENST00000367178 TSGA10IPQ3SY00 556 aa17.93■□□□□ 0.46
SCAF8-201ENST00000367178 CCDC62Q6P9F0 684 aa17.93■□□□□ 0.46
SCAF8-201ENST00000367178 RSRC2Q7L4I2 434 aaKnown RBP17.93■□□□□ 0.46
SCAF8-201ENST00000367178 FAM20AQ96MK3 541 aa17.93■□□□□ 0.46
SCAF8-201ENST00000367178 NLRP4Q96MN2 994 aa17.93■□□□□ 0.46
SCAF8-201ENST00000367178 GOLGA8IPA6NC78 632 aa17.93■□□□□ 0.46
SCAF8-201ENST00000367178 GOLGA8JA6NMD2 632 aa17.93■□□□□ 0.46
SCAF8-201ENST00000367178 INPP5BP32019 993 aa17.93■□□□□ 0.46
SCAF8-201ENST00000367178 NEDD9Q14511 834 aa17.93■□□□□ 0.46
SCAF8-201ENST00000367178 TTC31Q49AM3 519 aaPredicted RBP17.93■□□□□ 0.46
SCAF8-201ENST00000367178 ANKRD20A3Q5VUR7 823 aa17.93■□□□□ 0.46
SCAF8-201ENST00000367178 SNRNP48Q6IEG0 339 aaKnown RBP17.93■□□□□ 0.46
SCAF8-201ENST00000367178 PPP1R2P3Q6NXS1 205 aa17.93■□□□□ 0.46
SCAF8-201ENST00000367178 NSUN4Q96CB9 384 aaKnown RBP17.93■□□□□ 0.46
SCAF8-201ENST00000367178 BARHL2Q9NY43 387 aa17.93■□□□□ 0.46
SCAF8-201ENST00000367178 RNF40O75150 1001 aa17.92■□□□□ 0.46
SCAF8-201ENST00000367178 GBP1P32455 592 aa17.92■□□□□ 0.46
SCAF8-201ENST00000367178 STXBP2Q15833 593 aa17.92■□□□□ 0.46
SCAF8-201ENST00000367178 GKAP1Q5VSY0 366 aaPredicted RBP17.92■□□□□ 0.46
SCAF8-201ENST00000367178 ZNF233A6NK53 670 aa17.92■□□□□ 0.46
SCAF8-201ENST00000367178 CAMTA2O94983 1202 aa17.92■□□□□ 0.46
SCAF8-201ENST00000367178 C7orf31Q8N865 590 aa17.92■□□□□ 0.46
SCAF8-201ENST00000367178 PPP1R16BQ96T49 567 aa17.92■□□□□ 0.46
SCAF8-201ENST00000367178 NHEJ1Q9H9Q4 299 aaPredicted RBP17.92■□□□□ 0.46
SCAF8-201ENST00000367178 RNF146Q9NTX7 359 aa17.92■□□□□ 0.46
SCAF8-201ENST00000367178 SUGT1Q9Y2Z0 365 aa17.92■□□□□ 0.46
SCAF8-201ENST00000367178 AFG3L2Q9Y4W6 797 aa17.92■□□□□ 0.46
SCAF8-201ENST00000367178 DLC1Q96QB1 1528 aa17.92■□□□□ 0.46
SCAF8-201ENST00000367178 NDUFA10O95299 355 aa17.92■□□□□ 0.46
SCAF8-201ENST00000367178 OATP04181 439 aa17.92■□□□□ 0.46
SCAF8-201ENST00000367178 SERPING1P05155 500 aa17.92■□□□□ 0.46
SCAF8-201ENST00000367178 ITKQ08881 620 aa17.92■□□□□ 0.46
SCAF8-201ENST00000367178 SURF1Q15526 300 aa17.92■□□□□ 0.46
SCAF8-201ENST00000367178 MARCH10Q8NA82 808 aaPredicted RBP17.92■□□□□ 0.46
SCAF8-201ENST00000367178 MCUR1Q96AQ8 359 aa17.92■□□□□ 0.46
SCAF8-201ENST00000367178 SPTLC3Q9NUV7 552 aa17.92■□□□□ 0.46
SCAF8-201ENST00000367178 TMEM260Q9NX78 707 aa17.92■□□□□ 0.46
SCAF8-201ENST00000367178 WDR64B1ANS9 1081 aa17.91■□□□□ 0.46
SCAF8-201ENST00000367178 AKR1B1P15121 316 aa17.91■□□□□ 0.46
SCAF8-201ENST00000367178 CASP1P29466 404 aa17.91■□□□□ 0.46
SCAF8-201ENST00000367178 PRELPP51888 382 aa17.91■□□□□ 0.46
SCAF8-201ENST00000367178 CYP27A1Q02318 531 aa17.91■□□□□ 0.46
SCAF8-201ENST00000367178 LMNB2Q03252 620 aa17.91■□□□□ 0.46
SCAF8-201ENST00000367178 C12orf60Q5U649 245 aa17.91■□□□□ 0.46
SCAF8-201ENST00000367178 TBC1D16Q8TBP0 767 aa17.91■□□□□ 0.46
SCAF8-201ENST00000367178 MSTO1Q9BUK6 570 aa17.91■□□□□ 0.46
SCAF8-201ENST00000367178 IFT122Q9HBG6 1241 aa17.91■□□□□ 0.46
SCAF8-201ENST00000367178 MRPL47Q9HD33 250 aaKnown RBP17.91■□□□□ 0.46
SCAF8-201ENST00000367178 ZSCAN20P17040 1043 aaPredicted RBP17.91■□□□□ 0.46
SCAF8-201ENST00000367178 TPD52P55327 224 aaPredicted RBP17.91■□□□□ 0.46
SCAF8-201ENST00000367178 EN1Q05925 392 aaPredicted RBP17.91■□□□□ 0.46
SCAF8-201ENST00000367178 MB21D1Q8N884 522 aa17.91■□□□□ 0.46
SCAF8-201ENST00000367178 ALDH8A1Q9H2A2 487 aaPredicted RBP17.91■□□□□ 0.46
SCAF8-201ENST00000367178 TBC1D22BQ9NU19 505 aa17.91■□□□□ 0.46
SCAF8-201ENST00000367178 PPRC1Q5VV67 1664 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms