RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 PDZD8Q8NEN9 1154 aa9.76□□□□□ -0.85
H3F3A-201ENST00000366813 ASCC2Q9H1I8 757 aaPredicted RBP9.76□□□□□ -0.85
H3F3A-201ENST00000366813 KCNK12Q9HB15 430 aa9.76□□□□□ -0.85
H3F3A-201ENST00000366813 HTTP42858 3142 aa9.75□□□□□ -0.85
H3F3A-201ENST00000366813 PLEKHO1Q53GL0 409 aaPredicted RBP9.75□□□□□ -0.85
H3F3A-201ENST00000366813 LRRC56Q8IYG6 542 aaPredicted RBP9.75□□□□□ -0.85
H3F3A-201ENST00000366813 KCNN1Q92952 543 aa9.75□□□□□ -0.85
H3F3A-201ENST00000366813 PSMD1Q99460 953 aa9.75□□□□□ -0.85
H3F3A-201ENST00000366813 KIF2CQ99661 725 aa9.75□□□□□ -0.85
H3F3A-201ENST00000366813 EHMT1Q9H9B1 1298 aa9.75□□□□□ -0.85
H3F3A-201ENST00000366813 GBA2Q9HCG7 927 aaPredicted RBP9.75□□□□□ -0.85
H3F3A-201ENST00000366813 PCDHA11Q9Y5I1 949 aa9.75□□□□□ -0.85
H3F3A-201ENST00000366813 ARFGEF2Q9Y6D5 1785 aa9.75□□□□□ -0.85
H3F3A-201ENST00000366813 WASHC2AQ641Q2 1341 aa9.74□□□□□ -0.85
H3F3A-201ENST00000366813 ATE1O95260 518 aa9.74□□□□□ -0.85
H3F3A-201ENST00000366813 FGRP09769 529 aa9.74□□□□□ -0.85
H3F3A-201ENST00000366813 GMPSP49915 693 aaPredicted RBP9.74□□□□□ -0.85
H3F3A-201ENST00000366813 CLCQ05315 142 aa9.74□□□□□ -0.85
H3F3A-201ENST00000366813 GK5Q6ZS86 529 aa9.74□□□□□ -0.85
H3F3A-201ENST00000366813 C2orf69Q8N8R5 385 aa9.74□□□□□ -0.85
H3F3A-201ENST00000366813 SREK1Q8WXA9 508 aaKnown RBP9.74□□□□□ -0.85
H3F3A-201ENST00000366813 PUS7Q96PZ0 661 aaKnown RBP9.74□□□□□ -0.85
H3F3A-201ENST00000366813 ASPNQ9BXN1 380 aa9.74□□□□□ -0.85
H3F3A-201ENST00000366813 PCDHB14Q9Y5E9 798 aa9.74□□□□□ -0.85
H3F3A-201ENST00000366813 BCORQ6W2J9 1755 aa9.73□□□□□ -0.85
H3F3A-201ENST00000366813 A0A087WZG4 1122 aa9.73□□□□□ -0.85
H3F3A-201ENST00000366813 SHTN1A0MZ66 631 aa9.73□□□□□ -0.85
H3F3A-201ENST00000366813 ZGLP1P0C6A0 271 aa9.73□□□□□ -0.85
H3F3A-201ENST00000366813 SPPL2CQ8IUH8 684 aa9.73□□□□□ -0.85
H3F3A-201ENST00000366813 LILRA2Q8N149 483 aa9.73□□□□□ -0.85
H3F3A-201ENST00000366813 RNF32Q9H0A6 362 aa9.73□□□□□ -0.85
H3F3A-201ENST00000366813 UNC80Q8N2C7 3258 aa9.73□□□□□ -0.85
H3F3A-201ENST00000366813 SNED1Q8TER0 1413 aa9.72□□□□□ -0.85
H3F3A-201ENST00000366813 KLRG2A4D1S0 409 aaPredicted RBP9.72□□□□□ -0.85
H3F3A-201ENST00000366813 FITM1A5D6W6 292 aa9.72□□□□□ -0.85
H3F3A-201ENST00000366813 EIF4A2Q14240 407 aaKnown RBP9.72□□□□□ -0.85
H3F3A-201ENST00000366813 SF3A1Q15459 793 aaKnown RBP9.72□□□□□ -0.85
H3F3A-201ENST00000366813 C1orf141Q5JVX7 400 aa9.72□□□□□ -0.85
H3F3A-201ENST00000366813 INTS3Q68E01 1043 aaKnown RBP9.72□□□□□ -0.85
H3F3A-201ENST00000366813 ATG14Q6ZNE5 492 aa9.72□□□□□ -0.85
H3F3A-201ENST00000366813 MCF2L2Q86YR7 1114 aa9.72□□□□□ -0.85
H3F3A-201ENST00000366813 NIM1KQ8IY84 436 aa9.72□□□□□ -0.85
H3F3A-201ENST00000366813 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.72□□□□□ -0.853e-8■■■■□ 19.6
H3F3A-201ENST00000366813 TANGO6Q9C0B7 1094 aa9.72□□□□□ -0.85
H3F3A-201ENST00000366813 PPT2Q9UMR5 302 aa9.72□□□□□ -0.85
H3F3A-201ENST00000366813 TCAF2A6NFQ2 919 aa9.71□□□□□ -0.86
H3F3A-201ENST00000366813 NPIPB6E9PJ23 425 aa9.71□□□□□ -0.86
H3F3A-201ENST00000366813 CXCL9Q07325 125 aa9.71□□□□□ -0.86
H3F3A-201ENST00000366813 NBPF5PQ86XG9 351 aaPredicted RBP9.71□□□□□ -0.86
H3F3A-201ENST00000366813 STRIP2Q9ULQ0 834 aa9.71□□□□□ -0.86
H3F3A-201ENST00000366813 ZNRF3Q9ULT6 936 aa9.71□□□□□ -0.86
H3F3A-201ENST00000366813 NPC1L1Q9UHC9 1359 aa9.71□□□□□ -0.86
H3F3A-201ENST00000366813 ADM5C9JUS6 153 aa9.7□□□□□ -0.86
H3F3A-201ENST00000366813 CAMTA2O94983 1202 aa9.7□□□□□ -0.86
H3F3A-201ENST00000366813 ALDH1B1P30837 517 aa9.7□□□□□ -0.86
H3F3A-201ENST00000366813 DUSP4Q13115 394 aa9.7□□□□□ -0.86
H3F3A-201ENST00000366813 AMOTQ4VCS5 1084 aa9.7□□□□□ -0.86
H3F3A-201ENST00000366813 KRT26Q7Z3Y9 468 aa9.7□□□□□ -0.86
H3F3A-201ENST00000366813 RASAL3Q86YV0 1011 aa9.7□□□□□ -0.86
H3F3A-201ENST00000366813 CILP2Q8IUL8 1156 aa9.7□□□□□ -0.86
H3F3A-201ENST00000366813 FERD3LQ96RJ6 166 aa9.7□□□□□ -0.86
H3F3A-201ENST00000366813 CARD11Q9BXL7 1154 aa9.7□□□□□ -0.86
H3F3A-201ENST00000366813 R3HDMLQ9H3Y0 253 aa9.7□□□□□ -0.86
H3F3A-201ENST00000366813 PAPPA2Q9BXP8 1791 aa9.7□□□□□ -0.86
H3F3A-201ENST00000366813 ETV2O00321 342 aaPredicted RBP9.69□□□□□ -0.86
H3F3A-201ENST00000366813 TCERG1O14776 1098 aaKnown RBP9.69□□□□□ -0.86
H3F3A-201ENST00000366813 PPIP5K2O43314 1243 aa9.69□□□□□ -0.86
H3F3A-201ENST00000366813 FKTNO75072 461 aa9.69□□□□□ -0.86
H3F3A-201ENST00000366813 KRT1P04264 644 aa9.69□□□□□ -0.86
H3F3A-201ENST00000366813 ZSCAN22P10073 491 aaPredicted RBP9.69□□□□□ -0.86
H3F3A-201ENST00000366813 IMPDH2P12268 514 aa9.69□□□□□ -0.86
H3F3A-201ENST00000366813 CCDC81Q6ZN84 652 aa9.69□□□□□ -0.86
H3F3A-201ENST00000366813 SRRTQ9BXP5 876 aaKnown RBP9.69□□□□□ -0.86
H3F3A-201ENST00000366813 SLC6A17Q9H1V8 727 aa9.69□□□□□ -0.86
H3F3A-201ENST00000366813 SLC52A2Q9HAB3 445 aa9.69□□□□□ -0.86
H3F3A-201ENST00000366813 TRIM17Q9Y577 477 aa9.69□□□□□ -0.86
H3F3A-201ENST00000366813 SSU72P8A0A1W2PR75 194 aa9.68□□□□□ -0.86
H3F3A-201ENST00000366813 STARD3NLO95772 234 aa9.68□□□□□ -0.86
H3F3A-201ENST00000366813 RAG1P15918 1043 aa9.68□□□□□ -0.86
H3F3A-201ENST00000366813 CHRNEQ04844 493 aa9.68□□□□□ -0.86
H3F3A-201ENST00000366813 KCNA10Q16322 511 aa9.68□□□□□ -0.86
H3F3A-201ENST00000366813 ARSHQ5FYA8 562 aa9.68□□□□□ -0.86
H3F3A-201ENST00000366813 SIAH1Q8IUQ4 282 aa9.68□□□□□ -0.86
H3F3A-201ENST00000366813 DRC1Q96MC2 740 aa9.68□□□□□ -0.86
H3F3A-201ENST00000366813 CWC22Q9HCG8 908 aaKnown RBP9.68□□□□□ -0.86
H3F3A-201ENST00000366813 POLKQ9UBT6 870 aa9.68□□□□□ -0.86
H3F3A-201ENST00000366813 CNOT7Q9UIV1 285 aaKnown RBP9.68□□□□□ -0.86
H3F3A-201ENST00000366813 LAMA3Q16787 3333 aa9.68□□□□□ -0.86
H3F3A-201ENST00000366813 SHISA3A0PJX4 238 aa9.67□□□□□ -0.86
H3F3A-201ENST00000366813 RGS13O14921 159 aa9.67□□□□□ -0.86
H3F3A-201ENST00000366813 DNAJA2O60884 412 aa9.67□□□□□ -0.86
H3F3A-201ENST00000366813 RAD17O75943 681 aa9.67□□□□□ -0.86
H3F3A-201ENST00000366813 SSBP05455 408 aaKnown RBP eCLIP9.67□□□□□ -0.86
H3F3A-201ENST00000366813 ATP2B1P20020 1258 aa9.67□□□□□ -0.86
H3F3A-201ENST00000366813 RBBP8NLQ8NC74 664 aaPredicted RBP9.67□□□□□ -0.86
H3F3A-201ENST00000366813 ENOX1Q8TC92 643 aaKnown RBP9.67□□□□□ -0.86
H3F3A-201ENST00000366813 CPLX3Q8WVH0 158 aa9.67□□□□□ -0.86
H3F3A-201ENST00000366813 SHDQ96IW2 340 aa9.67□□□□□ -0.86
H3F3A-201ENST00000366813 SP110Q9HB58 689 aa9.67□□□□□ -0.86
H3F3A-201ENST00000366813 GPR160Q9UJ42 338 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms