RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 ZMYND12Q9H0C1 365 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 USP17L3A6NCW0 530 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 USP17L4A6NCW7 530 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 PSMD14O00487 310 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 EIF6P56537 245 aaKnown RBP5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 CFAP157Q5JU67 520 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 USP17L1Q7RTZ2 530 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 MCF2L2Q86YR7 1114 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 Q9H521 79 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 TTC26A0AVF1 554 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 PRLRP16471 622 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 NAALADL2Q58DX5 795 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 CDKAL1Q5VV42 579 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 C16orf86Q6ZW13 317 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 GSTA5Q7RTV2 222 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 NEK9Q8TD19 979 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 USP6NLQ92738 828 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 HOOK2Q96ED9 719 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 FAM204AQ9H8W3 233 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 SCOCQ9UIL1 159 aa5.84□□□□□ -1.47
CDC42BPA-204ENST00000366767 MDM2Q00987 491 aaPredicted RBP5.84□□□□□ -1.48
CDC42BPA-204ENST00000366767 H0YCG3 227 aa5.84□□□□□ -1.48
CDC42BPA-204ENST00000366767 TBX3O15119 743 aa5.84□□□□□ -1.48
CDC42BPA-204ENST00000366767 RNF40O75150 1001 aa5.84□□□□□ -1.48
CDC42BPA-204ENST00000366767 VPS41P49754 854 aa5.84□□□□□ -1.48
CDC42BPA-204ENST00000366767 MSL3Q8N5Y2 521 aaKnown RBP5.84□□□□□ -1.48
CDC42BPA-204ENST00000366767 IMPG2Q9BZV3 1241 aa5.84□□□□□ -1.48
CDC42BPA-204ENST00000366767 PCDHA1Q9Y5I3 950 aa5.84□□□□□ -1.48
CDC42BPA-204ENST00000366767 KCNK3O14649 394 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 GFPT2O94808 682 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 TAF11Q15544 211 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 OTUD6AQ7L8S5 288 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 BICD1Q96G01 975 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 NACC1Q96RE7 527 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 ERGIC2Q96RQ1 377 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 ZBTB5O15062 677 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 EXOC3O60645 756 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 RASSF7Q02833 373 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 RAD51AP2Q09MP3 1159 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 NNTQ13423 1086 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 SYN2Q92777 582 aaPredicted RBP5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 DYNLL2Q96FJ2 89 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 SEL1LQ9UBV2 794 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 SATB2Q9UPW6 733 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 STXBP3O00186 592 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 TMEM179Q6ZVK1 233 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 MSANTD4Q8NCY6 345 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 ARMC2Q8NEN0 867 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 CRAMP1Q96RY5 1269 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 SENP2Q9HC62 589 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 SNAP23O00161 211 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 NR2F2P24468 414 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 EIF4A3P38919 411 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 ICA1Q05084 483 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 TXNRD1Q16881 649 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 FAM196AQ6ZSG2 479 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 FAM160B2Q86V87 743 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 GRK7Q8WTQ7 553 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 CNKSR1Q969H4 720 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 PLEKHA4Q9H4M7 779 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 SPEF2Q9C093 1822 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 GAS7O60861 476 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 ZSCAN20P17040 1043 aaPredicted RBP5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 SESN3P58005 492 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 CUL1Q13616 776 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 WDR44Q5JSH3 913 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 SLC27A3Q5K4L6 730 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 PDCD7Q8N8D1 485 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 TRIM9Q9C026 710 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 ACTR5Q9H9F9 607 aaPredicted RBP5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 XAB2Q9HCS7 855 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 FAM217BQ9NTX9 383 aaPredicted RBP5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 ADAM21Q9UKJ8 722 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 TMEM110-MUSTN1A8MSY1 372 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 DNAJC8O75937 253 aaPredicted RBP5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 BMP3P12645 472 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 SF3A3Q12874 501 aaKnown RBP eCLIP5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 WDR93Q6P2C0 686 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 SP8Q8IXZ3 490 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 CXorf38Q8TB03 319 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 COA7Q96BR5 231 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 YY1AP1Q9H869 796 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 CYP2D6P10635 497 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 FXR1P51114 621 aaKnown RBP eCLIP5.83□□□□□ -1.485e-6■■■□□ 17.2
CDC42BPA-204ENST00000366767 ABCB5Q2M3G0 1257 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 LIN9Q5TKA1 542 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 RAD9BQ6WBX8 426 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 NLRX1Q86UT6 975 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 YIPF3Q9GZM5 350 aa5.83□□□□□ -1.48
CDC42BPA-204ENST00000366767 ENC1O14682 589 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 BUB1O43683 1085 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 ZBED4O75132 1171 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 RNF8O76064 485 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 CDC25AP30304 524 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 MAN1A1P33908 653 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 EIF3BP55884 814 aaKnown RBP5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 PPARDQ03181 441 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 AOC3Q16853 763 aa5.82□□□□□ -1.48
CDC42BPA-204ENST00000366767 ZNF662Q6ZS27 426 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms