RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 TXNP10599 105 aaKnown RBP9.4□□□□□ -0.9
MRPL55-211ENST00000366738 KIF5BP33176 963 aa9.4□□□□□ -0.9
MRPL55-211ENST00000366738 ARHGAP1Q07960 439 aa9.4□□□□□ -0.9
MRPL55-211ENST00000366738 PPP2R5BQ15173 497 aa9.4□□□□□ -0.9
MRPL55-211ENST00000366738 PTGISQ16647 500 aa9.4□□□□□ -0.9
MRPL55-211ENST00000366738 LY6KQ17RY6 165 aa9.4□□□□□ -0.9
MRPL55-211ENST00000366738 CNKSR3Q6P9H4 555 aa9.4□□□□□ -0.9
MRPL55-211ENST00000366738 LRRC8DQ7L1W4 858 aa9.4□□□□□ -0.9
MRPL55-211ENST00000366738 SPRYD3Q8NCJ5 442 aa9.4□□□□□ -0.9
MRPL55-211ENST00000366738 AFAP1L1Q8TED9 768 aa9.4□□□□□ -0.9
MRPL55-211ENST00000366738 SCFD2Q8WU76 684 aa9.4□□□□□ -0.9
MRPL55-211ENST00000366738 PIBF1Q8WXW3 757 aa9.4□□□□□ -0.9
MRPL55-211ENST00000366738 DHX38Q92620 1227 aaKnown RBP9.4□□□□□ -0.9
MRPL55-211ENST00000366738 KAT2BQ92831 832 aa9.4□□□□□ -0.9
MRPL55-211ENST00000366738 DMDP11532 3685 aa9.39□□□□□ -0.91
MRPL55-211ENST00000366738 C19orf67A6NJJ6 358 aa9.39□□□□□ -0.91
MRPL55-211ENST00000366738 CXCL10P02778 98 aa9.39□□□□□ -0.91
MRPL55-211ENST00000366738 FDPSP14324 419 aaKnown RBP9.39□□□□□ -0.91
MRPL55-211ENST00000366738 SELPP16109 830 aa9.39□□□□□ -0.91
MRPL55-211ENST00000366738 IFNAR1P17181 557 aa9.39□□□□□ -0.91
MRPL55-211ENST00000366738 IRS1P35568 1242 aa9.39□□□□□ -0.91
MRPL55-211ENST00000366738 PTPN11Q06124 597 aaPredicted RBP9.39□□□□□ -0.91
MRPL55-211ENST00000366738 PUS10Q3MIT2 529 aaKnown RBP9.39□□□□□ -0.91
MRPL55-211ENST00000366738 BRDTQ58F21 947 aaPredicted RBP9.39□□□□□ -0.91
MRPL55-211ENST00000366738 TCEAL5Q5H9L2 206 aa9.39□□□□□ -0.91
MRPL55-211ENST00000366738 GDF6Q6KF10 455 aaPredicted RBP9.39□□□□□ -0.91
MRPL55-211ENST00000366738 HOMER1Q86YM7 354 aa9.39□□□□□ -0.91
MRPL55-211ENST00000366738 CCDC155Q8N6L0 562 aa9.39□□□□□ -0.91
MRPL55-211ENST00000366738 SMARCC2Q8TAQ2 1214 aa9.39□□□□□ -0.91
MRPL55-211ENST00000366738 CAGE1Q8TC20 777 aa9.39□□□□□ -0.91
MRPL55-211ENST00000366738 AFG1LQ8WV93 481 aa9.39□□□□□ -0.91
MRPL55-211ENST00000366738 MRPL38Q96DV4 380 aaKnown RBP9.39□□□□□ -0.91
MRPL55-211ENST00000366738 AIFM3Q96NN9 605 aa9.39□□□□□ -0.91
MRPL55-211ENST00000366738 SPZ1Q9BXG8 430 aa9.39□□□□□ -0.91
MRPL55-211ENST00000366738 SLC26A6Q9BXS9 759 aa9.39□□□□□ -0.91
MRPL55-211ENST00000366738 RIOX1Q9H6W3 641 aa9.39□□□□□ -0.91
MRPL55-211ENST00000366738 VAT1LQ9HCJ6 419 aa9.39□□□□□ -0.91
MRPL55-211ENST00000366738 MUTYHQ9UIF7 546 aa9.39□□□□□ -0.91
MRPL55-211ENST00000366738 MICAL3Q7RTP6 2002 aa9.39□□□□□ -0.91
MRPL55-211ENST00000366738 MYH6P13533 1939 aa9.39□□□□□ -0.91
MRPL55-211ENST00000366738 ATG2AQ2TAZ0 1938 aa9.39□□□□□ -0.91
MRPL55-211ENST00000366738 KIAA1217Q5T5P2 1943 aa9.39□□□□□ -0.91
MRPL55-211ENST00000366738 ABCB11O95342 1321 aa9.38□□□□□ -0.91
MRPL55-211ENST00000366738 CPLX1O14810 134 aa9.38□□□□□ -0.91
MRPL55-211ENST00000366738 NKRFO15226 690 aaKnown RBP eCLIP9.38□□□□□ -0.91
MRPL55-211ENST00000366738 DHX16O60231 1041 aaKnown RBP9.38□□□□□ -0.91
MRPL55-211ENST00000366738 RGS20O76081 388 aa9.38□□□□□ -0.91
MRPL55-211ENST00000366738 MMP3P08254 477 aa9.38□□□□□ -0.91
MRPL55-211ENST00000366738 FOSBP53539 338 aa9.38□□□□□ -0.91
MRPL55-211ENST00000366738 HIC1Q14526 733 aa9.38□□□□□ -0.91
MRPL55-211ENST00000366738 MBTPS1Q14703 1052 aa9.38□□□□□ -0.91
MRPL55-211ENST00000366738 CLUL1Q15846 466 aa9.38□□□□□ -0.91
MRPL55-211ENST00000366738 PKN1Q16512 942 aa9.38□□□□□ -0.91
MRPL55-211ENST00000366738 TIGD5Q53EQ6 642 aa9.38□□□□□ -0.91
MRPL55-211ENST00000366738 IER5LQ5T953 404 aa9.38□□□□□ -0.91
MRPL55-211ENST00000366738 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.38□□□□□ -0.91
MRPL55-211ENST00000366738 SEPT14Q6ZU15 432 aa9.38□□□□□ -0.91
MRPL55-211ENST00000366738 ADHFE1Q8IWW8 467 aa9.38□□□□□ -0.91
MRPL55-211ENST00000366738 MTMR8Q96EF0 704 aa9.38□□□□□ -0.91
MRPL55-211ENST00000366738 MFSD14AQ96MC6 490 aa9.38□□□□□ -0.91
MRPL55-211ENST00000366738 PIGSQ96S52 555 aa9.38□□□□□ -0.91
MRPL55-211ENST00000366738 DDX41Q9UJV9 622 aaKnown RBP9.38□□□□□ -0.91
MRPL55-211ENST00000366738 PNMA2Q9UL42 364 aa9.38□□□□□ -0.91
MRPL55-211ENST00000366738 GVINP1Q7Z2Y8 2422 aa9.38□□□□□ -0.91
MRPL55-211ENST00000366738 FAM186AA6NE01 2351 aa9.37□□□□□ -0.91
MRPL55-211ENST00000366738 STK36Q9NRP7 1315 aa9.37□□□□□ -0.91
MRPL55-211ENST00000366738 CCDC196A0A1B0GTZ2 297 aa9.37□□□□□ -0.91
MRPL55-211ENST00000366738 ABHD14A-ACY1A0A1B0GW23 586 aa9.37□□□□□ -0.91
MRPL55-211ENST00000366738 CKBP12277 381 aa9.37□□□□□ -0.91
MRPL55-211ENST00000366738 EIF2AK2P19525 551 aaKnown RBP9.37□□□□□ -0.91
MRPL55-211ENST00000366738 GJB2P29033 226 aa9.37□□□□□ -0.91
MRPL55-211ENST00000366738 GNAQP50148 359 aa9.37□□□□□ -0.91
MRPL55-211ENST00000366738 HSD17B4P51659 736 aa9.37□□□□□ -0.91
MRPL55-211ENST00000366738 GHRHRQ02643 423 aa9.37□□□□□ -0.91
MRPL55-211ENST00000366738 BECN1Q14457 450 aa9.37□□□□□ -0.91
MRPL55-211ENST00000366738 PTPROQ16827 1216 aa9.37□□□□□ -0.91
MRPL55-211ENST00000366738 EPC2Q52LR7 807 aa9.37□□□□□ -0.91
MRPL55-211ENST00000366738 WWC2Q6AWC2 1192 aa9.37□□□□□ -0.91
MRPL55-211ENST00000366738 TYW1BQ6NUM6 668 aa9.37□□□□□ -0.91
MRPL55-211ENST00000366738 FBXO11Q86XK2 927 aa9.37□□□□□ -0.91
MRPL55-211ENST00000366738 BANK1Q8NDB2 785 aa9.37□□□□□ -0.91
MRPL55-211ENST00000366738 IL31RAQ8NI17 732 aa9.37□□□□□ -0.91
MRPL55-211ENST00000366738 NSUN6Q8TEA1 469 aaKnown RBP9.37□□□□□ -0.91
MRPL55-211ENST00000366738 GPKOWQ92917 476 aaPredicted RBP eCLIP9.37□□□□□ -0.91
MRPL55-211ENST00000366738 WNT8BQ93098 351 aa9.37□□□□□ -0.91
MRPL55-211ENST00000366738 PABPC5Q96DU9 382 aaKnown RBP9.37□□□□□ -0.91
MRPL55-211ENST00000366738 ZFP91Q96JP5 570 aaPredicted RBP9.37□□□□□ -0.91
MRPL55-211ENST00000366738 RMDN3Q96TC7 470 aa9.37□□□□□ -0.91
MRPL55-211ENST00000366738 LZTS2Q9BRK4 669 aa9.37□□□□□ -0.91
MRPL55-211ENST00000366738 RNF26Q9BY78 433 aaPredicted RBP9.37□□□□□ -0.91
MRPL55-211ENST00000366738 BCAS3Q9H6U6 928 aa9.37□□□□□ -0.91
MRPL55-211ENST00000366738 PXMP2Q9NR77 195 aa9.37□□□□□ -0.91
MRPL55-211ENST00000366738 GJB4Q9NTQ9 266 aa9.37□□□□□ -0.91
MRPL55-211ENST00000366738 FAM86C1Q9NVL1 165 aa9.37□□□□□ -0.91
MRPL55-211ENST00000366738 CLDND1Q9NY35 253 aa9.37□□□□□ -0.91
MRPL55-211ENST00000366738 PRKAG3Q9UGI9 489 aa9.37□□□□□ -0.91
MRPL55-211ENST00000366738 V9GY48 417 aaPredicted RBP9.37□□□□□ -0.91
MRPL55-211ENST00000366738 BAZ2BQ9UIF8 2168 aaKnown RBP9.37□□□□□ -0.91
MRPL55-211ENST00000366738 NLRC5Q86WI3 1866 aa9.36□□□□□ -0.91
MRPL55-211ENST00000366738 ZBTB5O15062 677 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms