RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 KRTAP10-3P60369 221 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 SRPK2P78362 688 aaKnown RBP0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 OCA2Q04671 838 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 NFYCQ13952 458 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 MAP3K11Q16584 847 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 TBR1Q16650 682 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 KRTAP13-3Q3SY46 172 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 ZMAT1Q5H9K5 638 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 RABL3Q5HYI8 236 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 FKBP15Q5T1M5 1219 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 EEF1DP3Q658K8 133 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 KIAA1161Q6NSJ0 714 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 ZDHHC17Q8IUH5 632 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 ANKRD35Q8N283 1001 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 RBMXL3Q8N7X1 1067 aaKnown RBP0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 ARRDC4Q8NCT1 418 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 C16orf92Q96LL3 132 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 MSL2Q9HCI7 577 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 ALG13Q9NP73 1137 aaKnown RBP0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 TXLNGQ9NUQ3 528 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 ASH2LQ9UBL3 628 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 TRPS1Q9UHF7 1281 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 POLR3KQ9Y2Y1 108 aaPredicted RBP0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 SH3BP1Q9Y3L3 701 aa0.92□□□□□ -2.26
RNU6-340P-201ENST00000364005 ZNF521Q96K83 1311 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 LRRC3CA6NJW4 275 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 NPHS1O60500 1241 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 ICMTO60725 284 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 PPFIA4O75335 1185 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 GLRBP48167 497 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 ARHGAP4P98171 946 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 FOXI1Q12951 378 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 CCDC85BQ15834 202 aaPredicted RBP0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 VPS72Q15906 364 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 TIGD2Q4W5G0 525 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 DIEXFQ68CQ4 756 aaKnown RBP0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 AWAT2Q6E213 333 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 RCSD1Q6JBY9 416 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 GSG1LQ6UXU4 331 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 BMP8AQ7Z5Y6 402 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 ARHGEF25Q86VW2 580 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 SLITRK4Q8IW52 837 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 TMEM192Q8IY95 271 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 C7orf61Q8IZ16 206 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 STPG3Q8N7X2 389 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 BRF1Q92994 677 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 CLUAP1Q96AJ1 413 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 DMRTB1Q96MA1 342 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 MPHOSPH9Q99550 1183 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 GPR87Q9BY21 358 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 KIAA1683Q9H0B3 1180 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 SERHL2Q9H4I8 314 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 SYBUQ9NX95 663 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 MARCH2Q9P0N8 246 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 ZFP69BQ9UJL9 534 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 TLK1Q9UKI8 766 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 TTF2Q9UNY4 1162 aaKnown RBP0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 MTMR7Q9Y216 660 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 MUC19Q7Z5P9 8384 aa0.91□□□□□ -2.26
RNU6-340P-201ENST00000364005 TCF20Q9UGU0 1960 aaKnown RBP0.9□□□□□ -2.26
RNU6-340P-201ENST00000364005 PNMA6FA0A0J9YX94 578 aa0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 CENPVL1A0A0U1RR11 272 aa0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 FAM221AA4D161 298 aa0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 C22orf46C9J442 243 aa0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 SUPT5HO00267 1087 aaKnown RBP0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 NTN3O00634 580 aaPredicted RBP0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 SHOXO15266 292 aa0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 SUSD5O60279 629 aa0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 C1QL1O75973 258 aa0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 THBDP07204 575 aa0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 USP17L7P0C7H9 530 aa0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 POLD1P28340 1107 aa0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 MAPK8P45983 427 aa0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 AVPR1BP47901 424 aa0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 SEC24CP53992 1094 aa0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 POLGP54098 1239 aaPredicted RBP0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 ZNF445P59923 1031 aa0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 SRSF7Q16629 238 aaKnown RBP eCLIP0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 NOL9Q5SY16 702 aaKnown RBP0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 CCDC62Q6P9F0 684 aa0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 BNC2Q6ZN30 1099 aaPredicted RBP0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 MEPCEQ7L2J0 689 aaKnown RBP0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 TMPRSS12Q86WS5 348 aa0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 PROSER1Q86XN7 944 aa0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 TEX2Q8IWB9 1127 aa0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 LCORLQ8N3X6 602 aa0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 CAGE1Q8TC20 777 aa0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 DDB2Q92466 427 aa0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 DPF3Q92784 378 aa0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 CAVIN3Q969G5 261 aa0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 MIEF2Q96C03 454 aa0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 SETDB2Q96T68 719 aa0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 WDR11Q9BZH6 1224 aa0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 ZNF768Q9H5H4 540 aaKnown RBP0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 AGO3Q9H9G7 860 aaKnown RBP0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 KCND1Q9NSA2 647 aa0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 SEMA4GQ9NTN9 838 aa0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 TLR6Q9Y2C9 796 aa0.9□□□□□ -2.27
RNU6-340P-201ENST00000364005 TRIOBPQ9H2D6 2365 aa0.89□□□□□ -2.27
RNU6-340P-201ENST00000364005 NPHP3-ACAD11A0A0J9YXS1 232 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms