RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 ASIC2Q16515 512 aa22.81■■□□□ 1.24
TRIM3-202ENST00000359518 IQCKQ8N0W5 287 aa22.81■■□□□ 1.24
TRIM3-202ENST00000359518 EMILIN3Q9NT22 766 aa22.81■■□□□ 1.24
TRIM3-202ENST00000359518 ERLIN2O94905 339 aa22.8■■□□□ 1.24
TRIM3-202ENST00000359518 CASP5P51878 434 aa22.8■■□□□ 1.24
TRIM3-202ENST00000359518 KCNH2Q12809 1159 aa22.8■■□□□ 1.24
TRIM3-202ENST00000359518 FBXW10Q5XX13 1052 aa22.8■■□□□ 1.24
TRIM3-202ENST00000359518 GBP6Q6ZN66 633 aa22.8■■□□□ 1.24
TRIM3-202ENST00000359518 PROM2Q8N271 834 aa22.8■■□□□ 1.24
TRIM3-202ENST00000359518 OR2W6PQ8NHA6 318 aa22.8■■□□□ 1.24
TRIM3-202ENST00000359518 EFCC1Q9HA90 598 aa22.8■■□□□ 1.24
TRIM3-202ENST00000359518 CNTNAP4Q9C0A0 1308 aa22.8■■□□□ 1.24
TRIM3-202ENST00000359518 SEC24CP53992 1094 aa22.8■■□□□ 1.24
TRIM3-202ENST00000359518 PTK2Q05397 1052 aa22.8■■□□□ 1.24
TRIM3-202ENST00000359518 TRIM59Q8IWR1 403 aa22.8■■□□□ 1.24
TRIM3-202ENST00000359518 KAT2BQ92831 832 aa22.8■■□□□ 1.24
TRIM3-202ENST00000359518 CCNL1Q9UK58 526 aaPredicted RBP22.8■■□□□ 1.24
TRIM3-202ENST00000359518 POTEFA5A3E0 1075 aa22.79■■□□□ 1.24
TRIM3-202ENST00000359518 RBAK-RBAKDNI3L0D1 243 aa22.79■■□□□ 1.24
TRIM3-202ENST00000359518 POTEIP0CG38 1075 aa22.79■■□□□ 1.24
TRIM3-202ENST00000359518 RFC4P35249 363 aa22.79■■□□□ 1.24
TRIM3-202ENST00000359518 MEI1Q5TIA1 1274 aa22.79■■□□□ 1.24
TRIM3-202ENST00000359518 POTEGQ6S5H5 508 aa22.79■■□□□ 1.24
TRIM3-202ENST00000359518 POTEEQ6S8J3 1075 aa22.79■■□□□ 1.24
TRIM3-202ENST00000359518 PIK3R5Q8WYR1 880 aa22.79■■□□□ 1.24
TRIM3-202ENST00000359518 BCAS3Q9H6U6 928 aa22.79■■□□□ 1.24
TRIM3-202ENST00000359518 PSTPIP2Q9H939 334 aa22.79■■□□□ 1.24
TRIM3-202ENST00000359518 LUC7LQ9NQ29 371 aaKnown RBP22.79■■□□□ 1.24
TRIM3-202ENST00000359518 TSKSQ9UJT2 592 aa22.79■■□□□ 1.24
TRIM3-202ENST00000359518 CEP104O60308 925 aa22.79■■□□□ 1.24
TRIM3-202ENST00000359518 CEP85LQ5SZL2 805 aa22.79■■□□□ 1.24
TRIM3-202ENST00000359518 CCDC65Q8IXS2 484 aa22.79■■□□□ 1.24
TRIM3-202ENST00000359518 CNBD1Q8NA66 436 aa22.79■■□□□ 1.24
TRIM3-202ENST00000359518 IPO4Q8TEX9 1081 aaKnown RBP22.79■■□□□ 1.24
TRIM3-202ENST00000359518 TAF4BQ92750 862 aa22.79■■□□□ 1.24
TRIM3-202ENST00000359518 INPP4AQ96PE3 977 aaPredicted RBP22.79■■□□□ 1.24
TRIM3-202ENST00000359518 SPAG5Q96R06 1193 aa22.79■■□□□ 1.24
TRIM3-202ENST00000359518 LRRC27Q9C0I9 530 aa22.79■■□□□ 1.24
TRIM3-202ENST00000359518 NR2F2P24468 414 aa22.79■■□□□ 1.24
TRIM3-202ENST00000359518 GLE1Q53GS7 698 aaKnown RBP22.79■■□□□ 1.24
TRIM3-202ENST00000359518 NAV1Q8NEY1 1877 aa22.79■■□□□ 1.24
TRIM3-202ENST00000359518 EDEM3Q9BZQ6 932 aa22.79■■□□□ 1.24
TRIM3-202ENST00000359518 EPB41P11171 864 aaKnown RBP22.78■■□□□ 1.24
TRIM3-202ENST00000359518 DCAF17Q5H9S7 520 aaPredicted RBP22.78■■□□□ 1.24
TRIM3-202ENST00000359518 TCERG1LQ5VWI1 586 aa22.78■■□□□ 1.24
TRIM3-202ENST00000359518 RPGRQ92834 1020 aaKnown RBP22.78■■□□□ 1.24
TRIM3-202ENST00000359518 CUL5Q93034 780 aa22.78■■□□□ 1.24
TRIM3-202ENST00000359518 C6orf229H3BNL8 230 aa22.78■■□□□ 1.24
TRIM3-202ENST00000359518 ASPRV1Q53RT3 343 aa22.78■■□□□ 1.24
TRIM3-202ENST00000359518 PNMA6FA0A0J9YX94 578 aa22.77■■□□□ 1.24
TRIM3-202ENST00000359518 TMCO5BA8MYB1 307 aa22.77■■□□□ 1.24
TRIM3-202ENST00000359518 RIMBP2O15034 1052 aa22.77■■□□□ 1.24
TRIM3-202ENST00000359518 GTF2IP78347 998 aa22.77■■□□□ 1.24
TRIM3-202ENST00000359518 ORC2Q13416 577 aaPredicted RBP22.77■■□□□ 1.24
TRIM3-202ENST00000359518 RPS6KA1Q15418 735 aa22.77■■□□□ 1.24
TRIM3-202ENST00000359518 ICE2Q659A1 982 aa22.77■■□□□ 1.24
TRIM3-202ENST00000359518 ZNF571Q7Z3V5 609 aaPredicted RBP22.77■■□□□ 1.24
TRIM3-202ENST00000359518 DDX60LQ5H9U9 1706 aaKnown RBP22.77■■□□□ 1.24
TRIM3-202ENST00000359518 SMARCA1P28370 1054 aa22.77■■□□□ 1.24
TRIM3-202ENST00000359518 NT5C2P49902 561 aa22.77■■□□□ 1.24
TRIM3-202ENST00000359518 SNAP25P60880 206 aa22.77■■□□□ 1.24
TRIM3-202ENST00000359518 RUBCNQ92622 972 aa22.77■■□□□ 1.24
TRIM3-202ENST00000359518 PLAAQ9Y263 795 aa22.77■■□□□ 1.24
TRIM3-202ENST00000359518 PCDHGC5Q9Y5F6 944 aa22.77■■□□□ 1.24
TRIM3-202ENST00000359518 CYP11B2P19099 503 aa22.76■■□□□ 1.23
TRIM3-202ENST00000359518 NR1D1P20393 614 aa22.76■■□□□ 1.23
TRIM3-202ENST00000359518 INPP5BP32019 993 aa22.76■■□□□ 1.23
TRIM3-202ENST00000359518 GTF2A1P52655 376 aaPredicted RBP22.76■■□□□ 1.23
TRIM3-202ENST00000359518 PSMC6P62333 389 aa22.76■■□□□ 1.23
TRIM3-202ENST00000359518 PABPC4Q13310 644 aaKnown RBP eCLIP22.76■■□□□ 1.23
TRIM3-202ENST00000359518 CDC37Q16543 378 aaPredicted RBP22.76■■□□□ 1.23
TRIM3-202ENST00000359518 USP38Q8NB14 1042 aa22.76■■□□□ 1.23
TRIM3-202ENST00000359518 MXD3Q9BW11 206 aa22.76■■□□□ 1.23
TRIM3-202ENST00000359518 NUCKS1Q9H1E3 243 aaKnown RBP22.76■■□□□ 1.23
TRIM3-202ENST00000359518 MAST2Q6P0Q8 1798 aa22.76■■□□□ 1.23
TRIM3-202ENST00000359518 MED24O75448 989 aa22.76■■□□□ 1.23
TRIM3-202ENST00000359518 PLCG2P16885 1265 aa22.76■■□□□ 1.23
TRIM3-202ENST00000359518 LSP1P33241 339 aa22.76■■□□□ 1.23
TRIM3-202ENST00000359518 MRPL12P52815 198 aaKnown RBP22.76■■□□□ 1.23
TRIM3-202ENST00000359518 ZNF543Q08ER8 600 aa22.76■■□□□ 1.23
TRIM3-202ENST00000359518 PPP4R3AQ6IN85 833 aa22.76■■□□□ 1.23
TRIM3-202ENST00000359518 KCTD10Q9H3F6 313 aa22.76■■□□□ 1.23
TRIM3-202ENST00000359518 DDX4Q9NQI0 724 aaKnown RBP22.76■■□□□ 1.23
TRIM3-202ENST00000359518 BCCIPQ9P287 314 aaKnown RBP eCLIP22.76■■□□□ 1.23
TRIM3-202ENST00000359518 HDAC9Q9UKV0 1011 aa22.76■■□□□ 1.23
TRIM3-202ENST00000359518 DAGLAQ9Y4D2 1042 aa22.76■■□□□ 1.23
TRIM3-202ENST00000359518 PCDHA2Q9Y5H9 948 aa22.76■■□□□ 1.23
TRIM3-202ENST00000359518 CETN3O15182 167 aa22.76■■□□□ 1.23
TRIM3-202ENST00000359518 ERVK-9P63128 1117 aa22.76■■□□□ 1.23
TRIM3-202ENST00000359518 SKOR1P84550 965 aa22.76■■□□□ 1.23
TRIM3-202ENST00000359518 DDX47Q9H0S4 455 aaKnown RBP22.76■■□□□ 1.23
TRIM3-202ENST00000359518 GGA1Q9UJY5 639 aa22.76■■□□□ 1.23
TRIM3-202ENST00000359518 TNFRSF8P28908 595 aa22.75■■□□□ 1.23
TRIM3-202ENST00000359518 GJB7Q6PEY0 223 aa22.75■■□□□ 1.23
TRIM3-202ENST00000359518 CEP63Q96MT8 703 aa22.75■■□□□ 1.23
TRIM3-202ENST00000359518 GANQ9H2C0 597 aa22.75■■□□□ 1.23
TRIM3-202ENST00000359518 RNF14Q9UBS8 474 aa22.75■■□□□ 1.23
TRIM3-202ENST00000359518 ARSHQ5FYA8 562 aa22.75■■□□□ 1.23
TRIM3-202ENST00000359518 SYN2Q92777 582 aaPredicted RBP22.75■■□□□ 1.23
TRIM3-202ENST00000359518 FAM196BA6NMK8 535 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms