RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 RFC4P35249 363 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 GJC1P36383 396 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 CYP2J2P51589 502 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 TBC1D9BQ66K14 1250 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 GUF1Q8N442 669 aaKnown RBP7.19□□□□□ -1.26
CSDE1-203ENST00000358528 RAD54LQ92698 747 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 LZTS2Q9BRK4 669 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 TMX4Q9H1E5 349 aaPredicted RBP7.19□□□□□ -1.26
CSDE1-203ENST00000358528 TCEAL9Q9UHQ7 104 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 HDAC9Q9UKV0 1011 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 AMFRQ9UKV5 643 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 ATP6V0A2Q9Y487 856 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 ATRNO75882 1429 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 POTEFA5A3E0 1075 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 FAM13AO94988 1023 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 PLA2G4BP0C869 781 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 POTEIP0CG38 1075 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 EPB41P11171 864 aaKnown RBP7.19□□□□□ -1.26
CSDE1-203ENST00000358528 MDH1P40925 334 aaKnown RBP7.19□□□□□ -1.26
CSDE1-203ENST00000358528 VPS41P49754 854 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 GRB10Q13322 594 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 FAM133BQ5BKY9 247 aaKnown RBP7.19□□□□□ -1.26
CSDE1-203ENST00000358528 GKAP1Q5VSY0 366 aaPredicted RBP7.19□□□□□ -1.26
CSDE1-203ENST00000358528 POTEGQ6S5H5 508 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 POTEEQ6S8J3 1075 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 KCNK18Q7Z418 384 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 ANKRD42Q8N9B4 389 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 MRRFQ96E11 262 aaKnown RBP7.19□□□□□ -1.26
CSDE1-203ENST00000358528 TRIM51Q9BSJ1 452 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 CEP72Q9P209 647 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 STK17AQ9UEE5 414 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 PTPN22Q9Y2R2 807 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 MYH15Q9Y2K3 1946 aa7.19□□□□□ -1.26
CSDE1-203ENST00000358528 SPDYE3A6NKU9 549 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 A6NNZ2 444 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 SART1O43290 800 aaKnown RBP7.18□□□□□ -1.26
CSDE1-203ENST00000358528 FGGP02679 453 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 TNFAIP3P21580 790 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 SCNN1DP51172 638 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 CLNS1AP54105 237 aaKnown RBP7.18□□□□□ -1.26
CSDE1-203ENST00000358528 TUBB8Q3ZCM7 444 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 TTBK2Q6IQ55 1244 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 HIBCHQ6NVY1 386 aaPredicted RBP7.18□□□□□ -1.26
CSDE1-203ENST00000358528 GJB7Q6PEY0 223 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 C4orf32Q8N8J7 132 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 ANKS4BQ8N8V4 417 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 MDM1Q8TC05 714 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 WHAMMQ8TF30 809 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 KAT2BQ92831 832 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 CUL5Q93034 780 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 NUCKS1Q9H1E3 243 aaKnown RBP7.18□□□□□ -1.26
CSDE1-203ENST00000358528 EPN3Q9H201 632 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 TAF1DQ9H5J8 278 aaPredicted RBP7.18□□□□□ -1.26
CSDE1-203ENST00000358528 MLXIPLQ9NP71 852 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 RIC8AQ9NPQ8 531 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 DNAJC17Q9NVM6 304 aaKnown RBP7.18□□□□□ -1.26
CSDE1-203ENST00000358528 SAMD15Q9P1V8 674 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 CTTNBP2NLQ9P2B4 639 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 STK38LQ9Y2H1 464 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.18□□□□□ -1.26
CSDE1-203ENST00000358528 RTCBQ9Y3I0 505 aaKnown RBP7.18□□□□□ -1.26
CSDE1-203ENST00000358528 FER1L4A9Z1Z3 1794 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 FAM196BA6NMK8 535 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 TTI1O43156 1089 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 SLIT3O75094 1523 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 RPS6KA5O75582 802 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 GTF2IP78347 998 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 INTS5Q6P9B9 1019 aaKnown RBP7.18□□□□□ -1.26
CSDE1-203ENST00000358528 MYCT1Q8N699 235 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 ERMNQ8TAM6 284 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 IQCDQ96DY2 449 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 NYXQ9GZU5 481 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 ZBTB21Q9ULJ3 1066 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 DNM3Q9UQ16 869 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 SNX24Q9Y343 169 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 NWD2Q9ULI1 1742 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 ZNF233A6NK53 670 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 HMGB1P1B2RPK0 211 aaPredicted RBP7.18□□□□□ -1.26
CSDE1-203ENST00000358528 RGS16O15492 202 aaPredicted RBP7.18□□□□□ -1.26
CSDE1-203ENST00000358528 STAT1P42224 750 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 OTUD6AQ7L8S5 288 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 MYCBPAPQ8TBZ2 947 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 LRRC15Q8TF66 581 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 HAUS2Q9NVX0 235 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 GCNT4Q9P109 453 aa7.18□□□□□ -1.26
CSDE1-203ENST00000358528 CHORDC1Q9UHD1 332 aaPredicted RBP7.18□□□□□ -1.26
CSDE1-203ENST00000358528 NOC2LQ9Y3T9 749 aaKnown RBP7.18□□□□□ -1.26
CSDE1-203ENST00000358528 GMNCA6NCL1 334 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 RASSF10A6NK89 507 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 EIF4E1BA6NMX2 242 aaKnown RBP7.17□□□□□ -1.26
CSDE1-203ENST00000358528 KIF4AO95239 1232 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 CCDC172P0C7W6 258 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 RASA1P20936 1047 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 PDE6BP35913 854 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 UBXN2AP68543 259 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 PTK2Q05397 1052 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 ZKSCAN8Q15776 578 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-203ENST00000358528 SLC18A3Q16572 532 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 PTGISQ16647 500 aa7.17□□□□□ -1.26
CSDE1-203ENST00000358528 CCDC38Q502W7 563 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms