RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 MINDY4BA8MYZ0 360 aa10.21□□□□□ -0.77
SMARCAL1-202ENST00000358207 FOXP2O15409 715 aa10.21□□□□□ -0.77
SMARCAL1-202ENST00000358207 ATP1A1P05023 1023 aaKnown RBP10.21□□□□□ -0.77
SMARCAL1-202ENST00000358207 GHRP10912 638 aa10.21□□□□□ -0.77
SMARCAL1-202ENST00000358207 CDC27P30260 824 aa10.21□□□□□ -0.77
SMARCAL1-202ENST00000358207 HTRA3P83110 453 aa10.21□□□□□ -0.77
SMARCAL1-202ENST00000358207 CTDSPL2Q05D32 466 aa10.21□□□□□ -0.77
SMARCAL1-202ENST00000358207 ZNF268Q14587 947 aaPredicted RBP10.21□□□□□ -0.77
SMARCAL1-202ENST00000358207 CAVIN4Q5BKX8 364 aa10.21□□□□□ -0.77
SMARCAL1-202ENST00000358207 TRIM68Q6AZZ1 485 aa10.21□□□□□ -0.77
SMARCAL1-202ENST00000358207 ADALQ6DHV7 355 aa10.21□□□□□ -0.77
SMARCAL1-202ENST00000358207 LCORLQ8N3X6 602 aa10.21□□□□□ -0.77
SMARCAL1-202ENST00000358207 CCDC63Q8NA47 563 aa10.21□□□□□ -0.77
SMARCAL1-202ENST00000358207 SPIRE2Q8WWL2 714 aa10.21□□□□□ -0.77
SMARCAL1-202ENST00000358207 PANX2Q96RD6 677 aa10.21□□□□□ -0.77
SMARCAL1-202ENST00000358207 ZKSCAN3Q9BRR0 538 aa10.21□□□□□ -0.77
SMARCAL1-202ENST00000358207 ATXN10Q9UBB4 475 aa10.21□□□□□ -0.77
SMARCAL1-202ENST00000358207 TUBGCP4Q9UGJ1 667 aa10.21□□□□□ -0.77
SMARCAL1-202ENST00000358207 GMNCA6NCL1 334 aa10.21□□□□□ -0.78
SMARCAL1-202ENST00000358207 A8MUI8 341 aa10.21□□□□□ -0.78
SMARCAL1-202ENST00000358207 AKR1B15C9JRZ8 316 aaPredicted RBP10.21□□□□□ -0.78
SMARCAL1-202ENST00000358207 TAF11Q15544 211 aa10.21□□□□□ -0.78
SMARCAL1-202ENST00000358207 DIXDC1Q155Q3 683 aa10.21□□□□□ -0.78
SMARCAL1-202ENST00000358207 CPLX3Q8WVH0 158 aa10.21□□□□□ -0.78
SMARCAL1-202ENST00000358207 DHRS1Q96LJ7 313 aa10.21□□□□□ -0.78
SMARCAL1-202ENST00000358207 ANKRD2Q9GZV1 360 aa10.21□□□□□ -0.78
SMARCAL1-202ENST00000358207 COA1Q9GZY4 146 aa10.21□□□□□ -0.78
SMARCAL1-202ENST00000358207 ZNF804BA4D1E1 1349 aa10.21□□□□□ -0.78
SMARCAL1-202ENST00000358207 F8VZ95 297 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 H7C1D1 291 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 ZNF185O15231 689 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 PRDM1O75626 825 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 C2orf54Q08AI8 447 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 NOGQ13253 232 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 ITGB3BPQ13352 177 aaPredicted RBP10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 DOK7Q18PE1 504 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 OPTNQ96CV9 577 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 IFT43Q96FT9 208 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 FAM81BQ96LP2 452 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 RHBDL2Q9NX52 303 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 BAZ2BQ9UIF8 2168 aaKnown RBP10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 C5orf60A6NFR6 353 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 SRRM3A6NNA2 597 aaPredicted RBP10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 PSMD14O00487 310 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 HSF2BPO75031 334 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 E2F6O75461 281 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 ADD2P35612 726 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 PLOD1Q02809 727 aaPredicted RBP10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 RBL2Q08999 1139 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 DYNC1I2Q13409 638 aaKnown RBP10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 CDC37Q16543 378 aaPredicted RBP10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 KBTBD12Q3ZCT8 623 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 TEX9Q8N6V9 391 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 SMYD1Q8NB12 490 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 RPS6KC1Q96S38 1066 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 NACA2Q9H009 215 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 CNOT7Q9UIV1 285 aaKnown RBP10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 GGA1Q9UJY5 639 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 MTMR7Q9Y216 660 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 TEX33O43247 280 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 TRAPPC3O43617 180 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 PDHA1P08559 390 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 SP100P23497 879 aaPredicted RBP10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 HIBADHP31937 336 aaKnown RBP10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 CCNG1P51959 295 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 STRIP1Q5VSL9 837 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 MAP1SQ66K74 1059 aaPredicted RBP10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 IQCKQ8N0W5 287 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 TRPM4Q8TD43 1214 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 APPBP2Q92624 585 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 NEK1Q96PY6 1258 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 RUFY1Q96T51 708 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 SLF1Q9BQI6 1058 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 BRD8Q9H0E9 1235 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 TUBE1Q9UJT0 475 aa10.2□□□□□ -0.78
SMARCAL1-202ENST00000358207 A0A1W2PQ27 194 aa10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 A0A1W2PQ64 194 aa10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 A0A1W2PQD8 194 aa10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 DESP17661 470 aa10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 BMP6P22004 513 aa10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 RFC5P40937 340 aa10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 PSMC4P43686 418 aa10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 KCNJ2P63252 427 aa10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 PRPF4BQ13523 1007 aaKnown RBP10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 LBRQ14739 615 aaKnown RBP10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 PKN1Q16512 942 aa10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 CACNA2D3Q8IZS8 1091 aa10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 CCDC82Q8N4S0 544 aa10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 MLKLQ8NB16 471 aa10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 KIFAP3Q92845 792 aa10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 MYL10Q9BUA6 226 aa10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 TTF2Q9UNY4 1162 aaKnown RBP10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 SLC12A4Q9UP95 1085 aa10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 PHIPQ8WWQ0 1821 aa10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 PALM3A6NDB9 673 aaPredicted RBP10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 E7EWF7 191 aa10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 VIMP08670 466 aaKnown RBP10.19□□□□□ -0.78
SMARCAL1-202ENST00000358207 CCND1P24385 295 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms