RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 REEP2Q9BRK0 252 aa17.5■□□□□ 0.39
PHTF1-201ENST00000357783 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.5■□□□□ 0.39
PHTF1-201ENST00000357783 PITPNM2Q9BZ72 1349 aa17.5■□□□□ 0.39
PHTF1-201ENST00000357783 GIT2Q14161 759 aa17.5■□□□□ 0.39
PHTF1-201ENST00000357783 TERF2Q15554 542 aa17.5■□□□□ 0.39
PHTF1-201ENST00000357783 CCDC174Q6PII3 467 aa17.5■□□□□ 0.39
PHTF1-201ENST00000357783 LSM14BQ9BX40 385 aaKnown RBP17.5■□□□□ 0.39
PHTF1-201ENST00000357783 FUT8Q9BYC5 575 aa17.5■□□□□ 0.39
PHTF1-201ENST00000357783 TSGA10Q9BZW7 698 aa17.5■□□□□ 0.39
PHTF1-201ENST00000357783 RNF216Q9NWF9 866 aaPredicted RBP17.5■□□□□ 0.39
PHTF1-201ENST00000357783 VAV3Q9UKW4 847 aa17.5■□□□□ 0.39
PHTF1-201ENST00000357783 RAB21Q9UL25 225 aa17.5■□□□□ 0.39
PHTF1-201ENST00000357783 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.5■□□□□ 0.39
PHTF1-201ENST00000357783 MYH10P35580 1976 aa17.5■□□□□ 0.39
PHTF1-201ENST00000357783 KIF20AO95235 890 aa17.49■□□□□ 0.39
PHTF1-201ENST00000357783 CIITAP33076 1130 aa17.49■□□□□ 0.39
PHTF1-201ENST00000357783 TUBB4BP68371 445 aa17.49■□□□□ 0.39
PHTF1-201ENST00000357783 ADAM9Q13443 819 aa17.49■□□□□ 0.39
PHTF1-201ENST00000357783 SLC30A10Q6XR72 485 aa17.49■□□□□ 0.39
PHTF1-201ENST00000357783 SFR1Q86XK3 245 aa17.49■□□□□ 0.39
PHTF1-201ENST00000357783 MLXIPQ9HAP2 919 aa17.49■□□□□ 0.39
PHTF1-201ENST00000357783 USO1O60763 962 aaKnown RBP17.49■□□□□ 0.39
PHTF1-201ENST00000357783 GNA14O95837 355 aa17.49■□□□□ 0.39
PHTF1-201ENST00000357783 CFBP00751 764 aa17.49■□□□□ 0.39
PHTF1-201ENST00000357783 APBA1Q02410 837 aa17.49■□□□□ 0.39
PHTF1-201ENST00000357783 ZYXQ15942 572 aaKnown RBP17.49■□□□□ 0.39
PHTF1-201ENST00000357783 SLC15A2Q16348 729 aa17.49■□□□□ 0.39
PHTF1-201ENST00000357783 RSBN1LQ6PCB5 846 aaPredicted RBP17.49■□□□□ 0.39
PHTF1-201ENST00000357783 ZNF771Q7L3S4 317 aaPredicted RBP17.49■□□□□ 0.39
PHTF1-201ENST00000357783 TRIM59Q8IWR1 403 aa17.49■□□□□ 0.39
PHTF1-201ENST00000357783 SYT2Q8N9I0 419 aaPredicted RBP17.49■□□□□ 0.39
PHTF1-201ENST00000357783 TBC1D5Q92609 795 aa17.49■□□□□ 0.39
PHTF1-201ENST00000357783 MMS19Q96T76 1030 aa17.49■□□□□ 0.39
PHTF1-201ENST00000357783 POLD4Q9HCU8 107 aa17.49■□□□□ 0.39
PHTF1-201ENST00000357783 ZNF70Q9UC06 446 aaPredicted RBP17.49■□□□□ 0.39
PHTF1-201ENST00000357783 VSNL1P62760 191 aa17.49■□□□□ 0.39
PHTF1-201ENST00000357783 DLGAP5Q15398 846 aa17.49■□□□□ 0.39
PHTF1-201ENST00000357783 PSME4Q14997 1843 aa17.48■□□□□ 0.39
PHTF1-201ENST00000357783 EML1O00423 815 aa17.48■□□□□ 0.39
PHTF1-201ENST00000357783 NOL4O94818 638 aa17.48■□□□□ 0.39
PHTF1-201ENST00000357783 TDRD12Q587J7 1177 aaKnown RBP17.48■□□□□ 0.39
PHTF1-201ENST00000357783 CDAN1Q8IWY9 1227 aa17.48■□□□□ 0.39
PHTF1-201ENST00000357783 DRC1Q96MC2 740 aa17.48■□□□□ 0.39
PHTF1-201ENST00000357783 BHMT2Q9H2M3 363 aa17.48■□□□□ 0.39
PHTF1-201ENST00000357783 SH2D4AQ9H788 454 aa17.48■□□□□ 0.39
PHTF1-201ENST00000357783 VEZTQ9HBM0 779 aa17.48■□□□□ 0.39
PHTF1-201ENST00000357783 JADE2Q9NQC1 790 aa17.48■□□□□ 0.39
PHTF1-201ENST00000357783 RGL1Q9NZL6 768 aa17.48■□□□□ 0.39
PHTF1-201ENST00000357783 ZBTB21Q9ULJ3 1066 aa17.48■□□□□ 0.39
PHTF1-201ENST00000357783 ZBTB12Q9Y330 459 aaPredicted RBP17.48■□□□□ 0.39
PHTF1-201ENST00000357783 CAPN6Q9Y6Q1 641 aa17.48■□□□□ 0.39
PHTF1-201ENST00000357783 RSPH10B2B2RC85 870 aa17.48■□□□□ 0.39
PHTF1-201ENST00000357783 PIK3CDO00329 1044 aa17.48■□□□□ 0.39
PHTF1-201ENST00000357783 ZNF185O15231 689 aa17.48■□□□□ 0.39
PHTF1-201ENST00000357783 POLR3GO15318 223 aaPredicted RBP17.48■□□□□ 0.39
PHTF1-201ENST00000357783 RSPH10BP0C881 870 aa17.48■□□□□ 0.39
PHTF1-201ENST00000357783 NR2F2P24468 414 aa17.48■□□□□ 0.39
PHTF1-201ENST00000357783 POLR2FP61218 127 aaKnown RBP17.48■□□□□ 0.39
PHTF1-201ENST00000357783 EZH2Q15910 746 aaKnown RBP17.48■□□□□ 0.39
PHTF1-201ENST00000357783 EIF2AK1Q9BQI3 630 aaKnown RBP17.48■□□□□ 0.39
PHTF1-201ENST00000357783 GOPCQ9HD26 462 aa17.48■□□□□ 0.39
PHTF1-201ENST00000357783 ABCB6Q9NP58 842 aa17.48■□□□□ 0.39
PHTF1-201ENST00000357783 CEP72Q9P209 647 aa17.48■□□□□ 0.39
PHTF1-201ENST00000357783 TMX2Q9Y320 296 aa17.48■□□□□ 0.39
PHTF1-201ENST00000357783 CETN3O15182 167 aa17.47■□□□□ 0.39
PHTF1-201ENST00000357783 MOCS3O95396 460 aa17.47■□□□□ 0.39
PHTF1-201ENST00000357783 MYBP10242 640 aa17.47■□□□□ 0.39
PHTF1-201ENST00000357783 UBXN2AP68543 259 aa17.47■□□□□ 0.39
PHTF1-201ENST00000357783 GFPT1Q06210 699 aaPredicted RBP17.47■□□□□ 0.39
PHTF1-201ENST00000357783 BEND6Q5SZJ8 279 aaPredicted RBP17.47■□□□□ 0.39
PHTF1-201ENST00000357783 CAGE1Q8TC20 777 aa17.47■□□□□ 0.39
PHTF1-201ENST00000357783 RUSC1Q9BVN2 902 aa17.47■□□□□ 0.39
PHTF1-201ENST00000357783 EDEM3Q9BZQ6 932 aa17.47■□□□□ 0.39
PHTF1-201ENST00000357783 BCAS3Q9H6U6 928 aa17.47■□□□□ 0.39
PHTF1-201ENST00000357783 ZNF277Q9NRM2 450 aaPredicted RBP17.47■□□□□ 0.39
PHTF1-201ENST00000357783 ERLIN1O75477 346 aa17.47■□□□□ 0.39
PHTF1-201ENST00000357783 PRPF6O94906 941 aaKnown RBP17.47■□□□□ 0.39
PHTF1-201ENST00000357783 LCA5LO95447 670 aa17.47■□□□□ 0.39
PHTF1-201ENST00000357783 CYP3A4P08684 503 aa17.47■□□□□ 0.39
PHTF1-201ENST00000357783 EPS15P42566 896 aa17.47■□□□□ 0.39
PHTF1-201ENST00000357783 MARSP56192 900 aaKnown RBP17.47■□□□□ 0.39
PHTF1-201ENST00000357783 SMC1AQ14683 1233 aaKnown RBP17.47■□□□□ 0.39
PHTF1-201ENST00000357783 LARGE2Q8N3Y3 721 aa17.47■□□□□ 0.39
PHTF1-201ENST00000357783 HNRNPLLQ8WVV9 542 aaKnown RBP17.47■□□□□ 0.39
PHTF1-201ENST00000357783 FAM151AQ8WW52 585 aa17.47■□□□□ 0.39
PHTF1-201ENST00000357783 WDR18Q9BV38 432 aa17.47■□□□□ 0.39
PHTF1-201ENST00000357783 CNTNAP1P78357 1384 aa17.46■□□□□ 0.39
PHTF1-201ENST00000357783 IGLV3-22A0A075B6J6 115 aa17.46■□□□□ 0.39
PHTF1-201ENST00000357783 ANO9A1A5B4 782 aa17.46■□□□□ 0.39
PHTF1-201ENST00000357783 CHMP2AO43633 222 aa17.46■□□□□ 0.39
PHTF1-201ENST00000357783 RXRBP28702 533 aa17.46■□□□□ 0.39
PHTF1-201ENST00000357783 MAGEA1P43355 309 aa17.46■□□□□ 0.39
PHTF1-201ENST00000357783 EN1Q05925 392 aaPredicted RBP17.46■□□□□ 0.39
PHTF1-201ENST00000357783 EDRF1Q3B7T1 1238 aa17.46■□□□□ 0.39
PHTF1-201ENST00000357783 HGSNATQ68CP4 663 aa17.46■□□□□ 0.39
PHTF1-201ENST00000357783 PPP4R3CPQ6ZMV5 832 aa17.46■□□□□ 0.39
PHTF1-201ENST00000357783 MIGA2Q7L4E1 593 aa17.46■□□□□ 0.39
PHTF1-201ENST00000357783 ZC3H3Q8IXZ2 948 aaKnown RBP17.46■□□□□ 0.39
PHTF1-201ENST00000357783 ANKRD13CQ8N6S4 541 aa17.46■□□□□ 0.39
PHTF1-201ENST00000357783 ZFP91Q96JP5 570 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms