RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 ZBTB38Q8NAP3 1195 aaPredicted RBP17.33■□□□□ 0.36
RXRA-201ENST00000356384 CEP170P1Q96L14 293 aa17.33■□□□□ 0.36
RXRA-201ENST00000356384 TUBB6Q9BUF5 446 aa17.33■□□□□ 0.36
RXRA-201ENST00000356384 TBX22Q9Y458 520 aa17.33■□□□□ 0.36
RXRA-201ENST00000356384 PRPSAP2O60256 369 aa17.33■□□□□ 0.36
RXRA-201ENST00000356384 SKIP12755 728 aa17.33■□□□□ 0.36
RXRA-201ENST00000356384 C10orf76Q5T2E6 689 aa17.33■□□□□ 0.36
RXRA-201ENST00000356384 LMCD1Q9NZU5 365 aa17.33■□□□□ 0.36
RXRA-201ENST00000356384 TSPOAP1O95153 1857 aa17.33■□□□□ 0.36
RXRA-201ENST00000356384 MED7O43513 233 aa17.32■□□□□ 0.36
RXRA-201ENST00000356384 BNIP3LO60238 219 aa17.32■□□□□ 0.36
RXRA-201ENST00000356384 KRT10P13645 584 aa17.32■□□□□ 0.36
RXRA-201ENST00000356384 RMDN2Q96LZ7 410 aa17.32■□□□□ 0.36
RXRA-201ENST00000356384 CYTH2Q99418 400 aa17.32■□□□□ 0.36
RXRA-201ENST00000356384 TRAIPQ9BWF2 469 aa17.32■□□□□ 0.36
RXRA-201ENST00000356384 FOXP1Q9H334 677 aaPredicted RBP17.32■□□□□ 0.36
RXRA-201ENST00000356384 CNOT10Q9H9A5 744 aaKnown RBP17.32■□□□□ 0.36
RXRA-201ENST00000356384 GINM1Q9NU53 330 aa17.32■□□□□ 0.36
RXRA-201ENST00000356384 DNAJC17Q9NVM6 304 aaKnown RBP17.32■□□□□ 0.36
RXRA-201ENST00000356384 KCNQ3O43525 872 aa17.32■□□□□ 0.36
RXRA-201ENST00000356384 NRBF2Q96F24 287 aa17.32■□□□□ 0.36
RXRA-201ENST00000356384 A0A087WWV3 80 aa17.32■□□□□ 0.36
RXRA-201ENST00000356384 SOWAHDA6NJG2 315 aa17.32■□□□□ 0.36
RXRA-201ENST00000356384 ATP6V1E1P36543 226 aa17.32■□□□□ 0.36
RXRA-201ENST00000356384 SLMAPQ14BN4 828 aa17.32■□□□□ 0.36
RXRA-201ENST00000356384 C11orf57Q6ZUT1 292 aaPredicted RBP17.32■□□□□ 0.36
RXRA-201ENST00000356384 TDRD7Q8NHU6 1098 aaKnown RBP17.32■□□□□ 0.36
RXRA-201ENST00000356384 SERPINI1Q99574 410 aa17.32■□□□□ 0.36
RXRA-201ENST00000356384 CLRN2A0PK11 232 aa17.32■□□□□ 0.36
RXRA-201ENST00000356384 ZNF233A6NK53 670 aa17.32■□□□□ 0.36
RXRA-201ENST00000356384 PMLP29590 882 aa17.32■□□□□ 0.36
RXRA-201ENST00000356384 GRAMD1BQ3KR37 738 aa17.32■□□□□ 0.36
RXRA-201ENST00000356384 HABP4Q5JVS0 413 aaKnown RBP17.32■□□□□ 0.36
RXRA-201ENST00000356384 ZNF658Q5TYW1 1059 aaPredicted RBP17.32■□□□□ 0.36
RXRA-201ENST00000356384 HIPK4Q8NE63 616 aa17.32■□□□□ 0.36
RXRA-201ENST00000356384 PBKQ96KB5 322 aa17.32■□□□□ 0.36
RXRA-201ENST00000356384 AP1M1Q9BXS5 423 aa17.32■□□□□ 0.36
RXRA-201ENST00000356384 ATP8B1O43520 1251 aa17.32■□□□□ 0.36
RXRA-201ENST00000356384 SLC16A2P36021 539 aa17.32■□□□□ 0.36
RXRA-201ENST00000356384 PHKA1P46020 1223 aa17.32■□□□□ 0.36
RXRA-201ENST00000356384 SIX6OS1Q8N1H7 587 aa17.32■□□□□ 0.36
RXRA-201ENST00000356384 EDC4Q6P2E9 1401 aaKnown RBP17.31■□□□□ 0.36
RXRA-201ENST00000356384 FMNL1O95466 1100 aaPredicted RBP17.31■□□□□ 0.36
RXRA-201ENST00000356384 EIF4A3P38919 411 aaKnown RBP17.31■□□□□ 0.36
RXRA-201ENST00000356384 KIAA1841Q6NSI8 718 aa17.31■□□□□ 0.36
RXRA-201ENST00000356384 CCHCR1Q8TD31 782 aa17.31■□□□□ 0.36
RXRA-201ENST00000356384 PPP1R16BQ96T49 567 aa17.31■□□□□ 0.36
RXRA-201ENST00000356384 JPH2Q9BR39 696 aaPredicted RBP17.31■□□□□ 0.36
RXRA-201ENST00000356384 SPTLC3Q9NUV7 552 aa17.31■□□□□ 0.36
RXRA-201ENST00000356384 SYF2O95926 243 aaKnown RBP17.31■□□□□ 0.36
RXRA-201ENST00000356384 CHEK2O96017 543 aa17.31■□□□□ 0.36
RXRA-201ENST00000356384 SLC7A5Q01650 507 aa17.31■□□□□ 0.36
RXRA-201ENST00000356384 NEK9Q8TD19 979 aa17.31■□□□□ 0.36
RXRA-201ENST00000356384 RGS12O14924 1447 aa17.31■□□□□ 0.36
RXRA-201ENST00000356384 COL17A1Q9UMD9 1497 aaPredicted RBP17.31■□□□□ 0.36
RXRA-201ENST00000356384 ABCC12Q96J65 1359 aa17.31■□□□□ 0.36
RXRA-201ENST00000356384 GUCY2CP25092 1073 aa17.31■□□□□ 0.36
RXRA-201ENST00000356384 ASPRV1Q53RT3 343 aa17.31■□□□□ 0.36
RXRA-201ENST00000356384 HIBCHQ6NVY1 386 aaPredicted RBP17.31■□□□□ 0.36
RXRA-201ENST00000356384 TRIML2Q8N7C3 387 aa17.31■□□□□ 0.36
RXRA-201ENST00000356384 TBCKQ8TEA7 893 aa17.31■□□□□ 0.36
RXRA-201ENST00000356384 AK8Q96MA6 479 aa17.31■□□□□ 0.36
RXRA-201ENST00000356384 NHEJ1Q9H9Q4 299 aaPredicted RBP17.31■□□□□ 0.36
RXRA-201ENST00000356384 FKBP3Q00688 224 aaKnown RBP17.31■□□□□ 0.36
RXRA-201ENST00000356384 SCARA5Q6ZMJ2 495 aa17.31■□□□□ 0.36
RXRA-201ENST00000356384 MAN1B1Q9UKM7 699 aa17.31■□□□□ 0.36
RXRA-201ENST00000356384 ERVV-2B6SEH9 535 aa17.3■□□□□ 0.36
RXRA-201ENST00000356384 TRAPPC10P48553 1259 aa17.3■□□□□ 0.36
RXRA-201ENST00000356384 GLE1Q53GS7 698 aaKnown RBP17.3■□□□□ 0.36
RXRA-201ENST00000356384 GIPC2Q8TF65 315 aa17.3■□□□□ 0.36
RXRA-201ENST00000356384 AP5M1Q9H0R1 490 aa17.3■□□□□ 0.36
RXRA-201ENST00000356384 UPF3AQ9H1J1 476 aaKnown RBP17.3■□□□□ 0.36
RXRA-201ENST00000356384 TMEM206Q9H813 350 aa17.3■□□□□ 0.36
RXRA-201ENST00000356384 CA4P22748 312 aa17.3■□□□□ 0.36
RXRA-201ENST00000356384 DR1Q01658 176 aa17.3■□□□□ 0.36
RXRA-201ENST00000356384 KIF19Q2TAC6 998 aa17.3■□□□□ 0.36
RXRA-201ENST00000356384 GPATCH4Q5T3I0 446 aaKnown RBP17.3■□□□□ 0.36
RXRA-201ENST00000356384 EXOC8Q8IYI6 725 aa17.3■□□□□ 0.36
RXRA-201ENST00000356384 DDIT3P35638 169 aa17.3■□□□□ 0.36
RXRA-201ENST00000356384 PHLPP2Q6ZVD8 1323 aa17.3■□□□□ 0.36
RXRA-201ENST00000356384 H3BRJ5 948 aa17.3■□□□□ 0.36
RXRA-201ENST00000356384 ADORA1P30542 326 aa17.3■□□□□ 0.36
RXRA-201ENST00000356384 TRIM59Q8IWR1 403 aa17.3■□□□□ 0.36
RXRA-201ENST00000356384 CAPN11Q9UMQ6 739 aa17.3■□□□□ 0.36
RXRA-201ENST00000356384 CARMIL3Q8ND23 1372 aa17.3■□□□□ 0.36
RXRA-201ENST00000356384 HSPA6P17066 643 aa17.3■□□□□ 0.36
RXRA-201ENST00000356384 UBE3CQ15386 1083 aa17.3■□□□□ 0.36
RXRA-201ENST00000356384 ADCK5Q3MIX3 580 aa17.3■□□□□ 0.36
RXRA-201ENST00000356384 FAM81BQ96LP2 452 aa17.3■□□□□ 0.36
RXRA-201ENST00000356384 HEXIM2Q96MH2 286 aaKnown RBP17.3■□□□□ 0.36
RXRA-201ENST00000356384 ZMYND12Q9H0C1 365 aa17.3■□□□□ 0.36
RXRA-201ENST00000356384 A0A087WUV0 522 aaPredicted RBP17.29■□□□□ 0.36
RXRA-201ENST00000356384 PCP11498 1178 aaKnown RBP17.29■□□□□ 0.36
RXRA-201ENST00000356384 NR1D1P20393 614 aa17.29■□□□□ 0.36
RXRA-201ENST00000356384 KLC3Q6P597 504 aa17.29■□□□□ 0.36
RXRA-201ENST00000356384 ARMC9Q7Z3E5 817 aa17.29■□□□□ 0.36
RXRA-201ENST00000356384 PYROXD1Q8WU10 500 aa17.29■□□□□ 0.36
RXRA-201ENST00000356384 SFMBT1Q9UHJ3 866 aa17.29■□□□□ 0.36
RXRA-201ENST00000356384 ZNF804BA4D1E1 1349 aa17.29■□□□□ 0.36
RXRA-201ENST00000356384 ZBED1O96006 694 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms