RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 FSTL1Q12841 308 aa15.23■□□□□ 0.03
HOXA1-202ENST00000355633 CTTNQ14247 550 aaKnown RBP15.23■□□□□ 0.03
HOXA1-202ENST00000355633 DHX40Q8IX18 779 aaKnown RBP15.23■□□□□ 0.03
HOXA1-202ENST00000355633 NEK9Q8TD19 979 aa15.23■□□□□ 0.03
HOXA1-202ENST00000355633 CCDC47Q96A33 483 aaKnown RBP15.23■□□□□ 0.03
HOXA1-202ENST00000355633 FAM155AB1AL88 458 aaPredicted RBP15.22■□□□□ 0.03
HOXA1-202ENST00000355633 SLITRK3O94933 977 aa15.22■□□□□ 0.03
HOXA1-202ENST00000355633 SSBP05455 408 aaKnown RBP eCLIP15.22■□□□□ 0.03
HOXA1-202ENST00000355633 KCNA2P16389 499 aa15.22■□□□□ 0.03
HOXA1-202ENST00000355633 KRT76Q01546 638 aa15.22■□□□□ 0.03
HOXA1-202ENST00000355633 KMT5BQ4FZB7 885 aa15.22■□□□□ 0.03
HOXA1-202ENST00000355633 ZNF658Q5TYW1 1059 aaPredicted RBP15.22■□□□□ 0.03
HOXA1-202ENST00000355633 TPH2Q8IWU9 490 aa15.22■□□□□ 0.03
HOXA1-202ENST00000355633 SAMM50Q9Y512 469 aa15.22■□□□□ 0.03
HOXA1-202ENST00000355633 IVNS1ABPQ9Y6Y0 642 aa15.22■□□□□ 0.03
HOXA1-202ENST00000355633 LRRC37A2A6NM11 1700 aa15.22■□□□□ 0.03
HOXA1-202ENST00000355633 SMTNL1A8MU46 457 aa15.22■□□□□ 0.03
HOXA1-202ENST00000355633 SPATA31C2B4DYI2 1134 aa15.22■□□□□ 0.03
HOXA1-202ENST00000355633 ICAM3P32942 547 aa15.22■□□□□ 0.03
HOXA1-202ENST00000355633 PSMC6P62333 389 aa15.22■□□□□ 0.03
HOXA1-202ENST00000355633 TAF1CQ15572 869 aaPredicted RBP15.22■□□□□ 0.03
HOXA1-202ENST00000355633 DYMQ7RTS9 669 aa15.22■□□□□ 0.03
HOXA1-202ENST00000355633 DDX12PQ92771 950 aa15.22■□□□□ 0.03
HOXA1-202ENST00000355633 HHIPL1Q96JK4 782 aa15.22■□□□□ 0.03
HOXA1-202ENST00000355633 FGD4Q96M96 766 aa15.22■□□□□ 0.03
HOXA1-202ENST00000355633 NFASCO94856 1347 aa15.21■□□□□ 0.03
HOXA1-202ENST00000355633 RHOBTB3O94955 611 aa15.21■□□□□ 0.03
HOXA1-202ENST00000355633 SFNP31947 248 aa15.21■□□□□ 0.03
HOXA1-202ENST00000355633 JAK3P52333 1124 aa15.21■□□□□ 0.03
HOXA1-202ENST00000355633 SLC12A3P55017 1021 aa15.21■□□□□ 0.03
HOXA1-202ENST00000355633 SREBF2Q12772 1141 aa15.21■□□□□ 0.03
HOXA1-202ENST00000355633 CNNM4Q6P4Q7 775 aa15.21■□□□□ 0.03
HOXA1-202ENST00000355633 IFNL1Q8IU54 200 aa15.21■□□□□ 0.03
HOXA1-202ENST00000355633 BMP2KQ9NSY1 1161 aaPredicted RBP15.21■□□□□ 0.03
HOXA1-202ENST00000355633 EXOC1Q9NV70 894 aa15.21■□□□□ 0.03
HOXA1-202ENST00000355633 LOC102724159A0A0B4J2E5 919 aa15.21■□□□□ 0.02
HOXA1-202ENST00000355633 WDR64B1ANS9 1081 aa15.21■□□□□ 0.02
HOXA1-202ENST00000355633 IKBKBO14920 756 aa15.21■□□□□ 0.02
HOXA1-202ENST00000355633 STRNO43815 780 aa15.21■□□□□ 0.02
HOXA1-202ENST00000355633 EYA4O95677 639 aa15.21■□□□□ 0.02
HOXA1-202ENST00000355633 P4HBP07237 508 aaKnown RBP15.21■□□□□ 0.02
HOXA1-202ENST00000355633 PLCB2Q00722 1185 aa15.21■□□□□ 0.02
HOXA1-202ENST00000355633 PWP2Q15269 919 aaKnown RBP15.21■□□□□ 0.02
HOXA1-202ENST00000355633 CT47A1Q5JQC4 288 aaPredicted RBP15.21■□□□□ 0.02
HOXA1-202ENST00000355633 ZNF746Q6NUN9 644 aaPredicted RBP15.21■□□□□ 0.02
HOXA1-202ENST00000355633 SEPT14Q6ZU15 432 aa15.21■□□□□ 0.02
HOXA1-202ENST00000355633 UNC13DQ70J99 1090 aa15.21■□□□□ 0.02
HOXA1-202ENST00000355633 GPBP1Q86WP2 473 aa15.21■□□□□ 0.02
HOXA1-202ENST00000355633 ABRAQ8N0Z2 381 aa15.21■□□□□ 0.02
HOXA1-202ENST00000355633 SYT2Q8N9I0 419 aaPredicted RBP15.21■□□□□ 0.02
HOXA1-202ENST00000355633 BANK1Q8NDB2 785 aa15.21■□□□□ 0.02
HOXA1-202ENST00000355633 LXNQ9BS40 222 aa15.21■□□□□ 0.02
HOXA1-202ENST00000355633 CPA4Q9UI42 421 aa15.21■□□□□ 0.02
HOXA1-202ENST00000355633 ADGRA2Q96PE1 1338 aa15.2■□□□□ 0.02
HOXA1-202ENST00000355633 PVALEFA0A1B0GWK0 134 aa15.2■□□□□ 0.02
HOXA1-202ENST00000355633 CCNE2O96020 404 aa15.2■□□□□ 0.02
HOXA1-202ENST00000355633 CYP11B2P19099 503 aa15.2■□□□□ 0.02
HOXA1-202ENST00000355633 ADORA2AP29274 412 aa15.2■□□□□ 0.02
HOXA1-202ENST00000355633 MAPK4P31152 587 aa15.2■□□□□ 0.02
HOXA1-202ENST00000355633 MYL5Q02045 173 aa15.2■□□□□ 0.02
HOXA1-202ENST00000355633 PAXIP1Q6ZW49 1069 aaPredicted RBP15.2■□□□□ 0.02
HOXA1-202ENST00000355633 GPR142Q7Z601 462 aa15.2■□□□□ 0.02
HOXA1-202ENST00000355633 SMYD4Q8IYR2 804 aaPredicted RBP15.2■□□□□ 0.02
HOXA1-202ENST00000355633 RDM1Q8NG50 284 aa15.2■□□□□ 0.02
HOXA1-202ENST00000355633 NACC1Q96RE7 527 aa15.2■□□□□ 0.02
HOXA1-202ENST00000355633 SENP7Q9BQF6 1050 aa15.2■□□□□ 0.02
HOXA1-202ENST00000355633 PLXNA1Q9UIW2 1896 aa15.2■□□□□ 0.02
HOXA1-202ENST00000355633 GDAQ9Y2T3 454 aa15.2■□□□□ 0.02
HOXA1-202ENST00000355633 DOCK5Q9H7D0 1870 aa15.2■□□□□ 0.02
HOXA1-202ENST00000355633 IDEP14735 1019 aa15.19■□□□□ 0.02
HOXA1-202ENST00000355633 CD44P16070 742 aaKnown RBP15.19■□□□□ 0.02
HOXA1-202ENST00000355633 ERCC5P28715 1186 aaPredicted RBP15.19■□□□□ 0.02
HOXA1-202ENST00000355633 TPM4P67936 248 aa15.19■□□□□ 0.02
HOXA1-202ENST00000355633 PIGOQ8TEQ8 1089 aa15.19■□□□□ 0.02
HOXA1-202ENST00000355633 DNAJC19Q96DA6 116 aa15.19■□□□□ 0.02
HOXA1-202ENST00000355633 BHMT2Q9H2M3 363 aa15.19■□□□□ 0.02
HOXA1-202ENST00000355633 JPH1Q9HDC5 661 aaPredicted RBP15.19■□□□□ 0.02
HOXA1-202ENST00000355633 WRAP73Q9P2S5 460 aaPredicted RBP15.19■□□□□ 0.02
HOXA1-202ENST00000355633 SLC9A2Q9UBY0 812 aa15.19■□□□□ 0.02
HOXA1-202ENST00000355633 LOXHD1Q8IVV2 1947 aa15.19■□□□□ 0.02
HOXA1-202ENST00000355633 ASB14A6NK59 587 aa15.19■□□□□ 0.02
HOXA1-202ENST00000355633 PPP1R3GB7ZBB8 358 aa15.19■□□□□ 0.02
HOXA1-202ENST00000355633 QARSP47897 775 aaKnown RBP15.19■□□□□ 0.02
HOXA1-202ENST00000355633 NCAPHQ15003 741 aa15.19■□□□□ 0.02
HOXA1-202ENST00000355633 ZNF792Q3KQV3 632 aa15.19■□□□□ 0.02
HOXA1-202ENST00000355633 KLHL10Q6JEL2 608 aa15.19■□□□□ 0.02
HOXA1-202ENST00000355633 EEPD1Q7L9B9 569 aa15.19■□□□□ 0.02
HOXA1-202ENST00000355633 SMAP1Q8IYB5 467 aaPredicted RBP15.19■□□□□ 0.02
HOXA1-202ENST00000355633 MORC4Q8TE76 937 aa15.19■□□□□ 0.02
HOXA1-202ENST00000355633 GTPBP4Q9BZE4 634 aaKnown RBP15.19■□□□□ 0.02
HOXA1-202ENST00000355633 ZSWIM4Q9H7M6 989 aa15.19■□□□□ 0.02
HOXA1-202ENST00000355633 COBLO75128 1261 aa15.18■□□□□ 0.02
HOXA1-202ENST00000355633 KRT18P05783 430 aaKnown RBP15.18■□□□□ 0.02
HOXA1-202ENST00000355633 SP2Q02086 613 aa15.18■□□□□ 0.02
HOXA1-202ENST00000355633 CCDC173Q0VFZ6 552 aa15.18■□□□□ 0.02
HOXA1-202ENST00000355633 GRM1Q13255 1194 aa15.18■□□□□ 0.02
HOXA1-202ENST00000355633 PLEKHH3Q7Z736 793 aa15.18■□□□□ 0.02
HOXA1-202ENST00000355633 GIMAP8Q8ND71 665 aaPredicted RBP15.18■□□□□ 0.02
HOXA1-202ENST00000355633 BCAS3Q9H6U6 928 aa15.18■□□□□ 0.02
HOXA1-202ENST00000355633 ZFYVE28Q9HCC9 887 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms