RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 ITGB3BPQ13352 177 aaPredicted RBP19.16■□□□□ 0.66
PDLIM7-201ENST00000355572 MTMR1Q13613 665 aa19.16■□□□□ 0.66
PDLIM7-201ENST00000355572 JAKMIP3Q5VZ66 844 aa19.16■□□□□ 0.66
PDLIM7-201ENST00000355572 MAFAQ8NHW3 353 aaPredicted RBP19.16■□□□□ 0.66
PDLIM7-201ENST00000355572 RASGRP4Q8TDF6 673 aa19.16■□□□□ 0.66
PDLIM7-201ENST00000355572 MXRA8Q9BRK3 442 aa19.16■□□□□ 0.66
PDLIM7-201ENST00000355572 FTOQ9C0B1 505 aaKnown RBP eCLIP19.16■□□□□ 0.66
PDLIM7-201ENST00000355572 C17orf102A2RUQ5 167 aa19.15■□□□□ 0.66
PDLIM7-201ENST00000355572 FOSL2P15408 326 aa19.15■□□□□ 0.66
PDLIM7-201ENST00000355572 FGD1P98174 961 aa19.15■□□□□ 0.66
PDLIM7-201ENST00000355572 RUFY3Q7L099 469 aa19.15■□□□□ 0.66
PDLIM7-201ENST00000355572 LMBR1Q8WVP7 490 aa19.15■□□□□ 0.66
PDLIM7-201ENST00000355572 ATP6V0A1Q93050 837 aa19.15■□□□□ 0.66
PDLIM7-201ENST00000355572 KCNH7Q9NS40 1196 aa19.15■□□□□ 0.66
PDLIM7-201ENST00000355572 EVPLQ92817 2033 aa19.15■□□□□ 0.66
PDLIM7-201ENST00000355572 MYH9P35579 1960 aaKnown RBP19.14■□□□□ 0.65
PDLIM7-201ENST00000355572 EPOPA6NHQ4 379 aa19.14■□□□□ 0.65
PDLIM7-201ENST00000355572 FAM86B1E9PN63 330 aa19.14■□□□□ 0.65
PDLIM7-201ENST00000355572 PRPF3O43395 683 aaKnown RBP19.14■□□□□ 0.65
PDLIM7-201ENST00000355572 FAM86B2P0C5J1 330 aa19.14■□□□□ 0.65
PDLIM7-201ENST00000355572 MARK3P27448 753 aa19.14■□□□□ 0.65
PDLIM7-201ENST00000355572 SREBF1P36956 1147 aa19.14■□□□□ 0.65
PDLIM7-201ENST00000355572 WDR5P61964 334 aaKnown RBP19.14■□□□□ 0.65
PDLIM7-201ENST00000355572 MKRN4PQ13434 485 aaPredicted RBP19.14■□□□□ 0.65
PDLIM7-201ENST00000355572 RUFY4Q6ZNE9 571 aa19.14■□□□□ 0.65
PDLIM7-201ENST00000355572 PRDM6Q9NQX0 595 aa19.14■□□□□ 0.65
PDLIM7-201ENST00000355572 LCHNA4D1U4 455 aa19.13■□□□□ 0.65
PDLIM7-201ENST00000355572 hCG_1984214I3L0E3 225 aa19.13■□□□□ 0.65
PDLIM7-201ENST00000355572 RFXAPO00287 272 aa19.13■□□□□ 0.65
PDLIM7-201ENST00000355572 CA3P07451 260 aa19.13■□□□□ 0.65
PDLIM7-201ENST00000355572 RAB30Q15771 203 aa19.13■□□□□ 0.65
PDLIM7-201ENST00000355572 CCDC155Q8N6L0 562 aa19.13■□□□□ 0.65
PDLIM7-201ENST00000355572 ZNF713Q8N859 430 aaPredicted RBP19.13■□□□□ 0.65
PDLIM7-201ENST00000355572 ZMYND12Q9H0C1 365 aa19.13■□□□□ 0.65
PDLIM7-201ENST00000355572 MTIF3Q9H2K0 278 aaKnown RBP19.13■□□□□ 0.65
PDLIM7-201ENST00000355572 VPS54Q9P1Q0 977 aa19.13■□□□□ 0.65
PDLIM7-201ENST00000355572 MSRAQ9UJ68 235 aa19.13■□□□□ 0.65
PDLIM7-201ENST00000355572 PCDHA11Q9Y5I1 949 aa19.13■□□□□ 0.65
PDLIM7-201ENST00000355572 PRUNE2Q8WUY3 3088 aa19.12■□□□□ 0.65
PDLIM7-201ENST00000355572 ATG2AQ2TAZ0 1938 aa19.12■□□□□ 0.65
PDLIM7-201ENST00000355572 NLRC5Q86WI3 1866 aa19.12■□□□□ 0.65
PDLIM7-201ENST00000355572 IGLV3-22A0A075B6J6 115 aa19.12■□□□□ 0.65
PDLIM7-201ENST00000355572 MEIS1O00470 390 aa19.12■□□□□ 0.65
PDLIM7-201ENST00000355572 CCNE2O96020 404 aa19.12■□□□□ 0.65
PDLIM7-201ENST00000355572 CTSHP09668 335 aa19.12■□□□□ 0.65
PDLIM7-201ENST00000355572 PSMA5P28066 241 aa19.12■□□□□ 0.65
PDLIM7-201ENST00000355572 THPOP40225 353 aa19.12■□□□□ 0.65
PDLIM7-201ENST00000355572 ARHGAP4P98171 946 aa19.12■□□□□ 0.65
PDLIM7-201ENST00000355572 MARCH8Q5T0T0 291 aa19.12■□□□□ 0.65
PDLIM7-201ENST00000355572 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.12■□□□□ 0.65
PDLIM7-201ENST00000355572 HERC6Q8IVU3 1022 aa19.12■□□□□ 0.65
PDLIM7-201ENST00000355572 AIFM3Q96NN9 605 aa19.12■□□□□ 0.65
PDLIM7-201ENST00000355572 SLC26A6Q9BXS9 759 aa19.12■□□□□ 0.65
PDLIM7-201ENST00000355572 CERS4Q9HA82 394 aa19.12■□□□□ 0.65
PDLIM7-201ENST00000355572 AGO4Q9HCK5 861 aaKnown RBP19.12■□□□□ 0.65
PDLIM7-201ENST00000355572 UNC80Q8N2C7 3258 aa19.12■□□□□ 0.65
PDLIM7-201ENST00000355572 ESYT2A0FGR8 921 aa19.11■□□□□ 0.65
PDLIM7-201ENST00000355572 LGR5O75473 907 aa19.11■□□□□ 0.65
PDLIM7-201ENST00000355572 CENPBP07199 599 aaPredicted RBP19.11■□□□□ 0.65
PDLIM7-201ENST00000355572 IFNAR1P17181 557 aa19.11■□□□□ 0.65
PDLIM7-201ENST00000355572 AP3B2Q13367 1082 aa19.11■□□□□ 0.65
PDLIM7-201ENST00000355572 CEP55Q53EZ4 464 aa19.11■□□□□ 0.65
PDLIM7-201ENST00000355572 CNKSR3Q6P9H4 555 aa19.11■□□□□ 0.65
PDLIM7-201ENST00000355572 DBF4BQ8NFT6 615 aa19.11■□□□□ 0.65
PDLIM7-201ENST00000355572 SEPT1Q8WYJ6 367 aa19.11■□□□□ 0.65
PDLIM7-201ENST00000355572 REV3LO60673 3130 aa19.1■□□□□ 0.65
PDLIM7-201ENST00000355572 RSPH10B2B2RC85 870 aa19.1■□□□□ 0.65
PDLIM7-201ENST00000355572 DDX39AO00148 427 aaKnown RBP19.1■□□□□ 0.65
PDLIM7-201ENST00000355572 DHX15O43143 795 aaKnown RBP19.1■□□□□ 0.65
PDLIM7-201ENST00000355572 EPB41L2O43491 1005 aaKnown RBP19.1■□□□□ 0.65
PDLIM7-201ENST00000355572 RSPH10BP0C881 870 aa19.1■□□□□ 0.65
PDLIM7-201ENST00000355572 ACTN1P12814 892 aa19.1■□□□□ 0.65
PDLIM7-201ENST00000355572 STK3Q13188 491 aa19.1■□□□□ 0.65
PDLIM7-201ENST00000355572 PPP2R2DQ66LE6 453 aa19.1■□□□□ 0.65
PDLIM7-201ENST00000355572 TRAPPC12Q8WVT3 735 aa19.1■□□□□ 0.65
PDLIM7-201ENST00000355572 SLC9A7Q96T83 725 aa19.1■□□□□ 0.65
PDLIM7-201ENST00000355572 RNF26Q9BY78 433 aaPredicted RBP19.1■□□□□ 0.65
PDLIM7-201ENST00000355572 TM6SF1Q9BZW5 370 aa19.1■□□□□ 0.65
PDLIM7-201ENST00000355572 SLC28A3Q9HAS3 691 aa19.1■□□□□ 0.65
PDLIM7-201ENST00000355572 JPH1Q9HDC5 661 aaPredicted RBP19.1■□□□□ 0.65
PDLIM7-201ENST00000355572 SLC9A2Q9UBY0 812 aa19.1■□□□□ 0.65
PDLIM7-201ENST00000355572 NFASCO94856 1347 aa19.09■□□□□ 0.65
PDLIM7-201ENST00000355572 EMSYQ7Z589 1322 aa19.09■□□□□ 0.65
PDLIM7-201ENST00000355572 COL4A6Q14031 1691 aa19.09■□□□□ 0.65
PDLIM7-201ENST00000355572 CCDC196A0A1B0GTZ2 297 aa19.09■□□□□ 0.65
PDLIM7-201ENST00000355572 BAIAP3O94812 1187 aa19.09■□□□□ 0.65
PDLIM7-201ENST00000355572 SEC24BO95487 1268 aa19.09■□□□□ 0.65
PDLIM7-201ENST00000355572 FOSP01100 380 aaPredicted RBP19.09■□□□□ 0.65
PDLIM7-201ENST00000355572 ACTR2P61160 394 aa19.09■□□□□ 0.65
PDLIM7-201ENST00000355572 TAP1Q03518 808 aa19.09■□□□□ 0.65
PDLIM7-201ENST00000355572 NPY5RQ15761 445 aa19.09■□□□□ 0.65
PDLIM7-201ENST00000355572 KRT40Q6A162 431 aa19.09■□□□□ 0.65
PDLIM7-201ENST00000355572 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.09■□□□□ 0.65
PDLIM7-201ENST00000355572 GIMAP8Q8ND71 665 aaPredicted RBP19.09■□□□□ 0.65
PDLIM7-201ENST00000355572 CDHR1Q96JP9 859 aa19.09■□□□□ 0.65
PDLIM7-201ENST00000355572 ZNF215Q9UL58 517 aaPredicted RBP19.09■□□□□ 0.65
PDLIM7-201ENST00000355572 MAFGO15525 162 aa19.08■□□□□ 0.64
PDLIM7-201ENST00000355572 ATG7O95352 703 aa19.08■□□□□ 0.64
PDLIM7-201ENST00000355572 CHRNA1P02708 482 aa19.08■□□□□ 0.64
PDLIM7-201ENST00000355572 CYP3A4P08684 503 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms