RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 FAM161BQ96MY7 647 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 FAM193BQ96PV7 902 aaPredicted RBP8.62□□□□□ -1.03
SCN8A-201ENST00000354534 HESX1Q9UBX0 185 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 UBE4BO95155 1302 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 LINC00854A0A1B0GVQ3 168 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 DLATP10515 647 aaKnown RBP8.62□□□□□ -1.03
SCN8A-201ENST00000354534 POLR2FP61218 127 aaKnown RBP8.62□□□□□ -1.03
SCN8A-201ENST00000354534 TPH2Q8IWU9 490 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 KCTD6Q8NC69 237 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 MOSPD1Q9UJG1 213 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 ZNF215Q9UL58 517 aaPredicted RBP8.62□□□□□ -1.03
SCN8A-201ENST00000354534 AURKCQ9UQB9 309 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 CLK1P49759 484 aaKnown RBP8.62□□□□□ -1.03
SCN8A-201ENST00000354534 SPATA1Q5VX52 437 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 TAF8Q7Z7C8 310 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 LRRC8AQ8IWT6 810 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 STAMQ92783 540 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 C1orf112Q9NSG2 853 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 MRPL39Q9NYK5 338 aaKnown RBP8.62□□□□□ -1.03
SCN8A-201ENST00000354534 TEX28O15482 410 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 EPHB4P54760 987 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 SLC30A9Q6PML9 568 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 LLPHQ9BRT6 129 aaKnown RBP8.62□□□□□ -1.03
SCN8A-201ENST00000354534 ECT2Q9H8V3 914 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 CC2D2AQ9P2K1 1620 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 TMPRSS15P98073 1019 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 CTTNQ14247 550 aaKnown RBP8.62□□□□□ -1.03
SCN8A-201ENST00000354534 CNGA2Q16280 664 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 AATFQ9NY61 560 aaKnown RBP eCLIP8.62□□□□□ -1.03
SCN8A-201ENST00000354534 GON4LQ3T8J9 2241 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 LLGL1Q15334 1064 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 TADA2BQ86TJ2 420 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 GPR101Q96P66 508 aaPredicted RBP8.62□□□□□ -1.03
SCN8A-201ENST00000354534 H2AFY2Q9P0M6 372 aaPredicted RBP8.62□□□□□ -1.03
SCN8A-201ENST00000354534 STXBP3O00186 592 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 ENC1O14682 589 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 ALDH1L1O75891 902 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 ARF5P84085 180 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 F8W8V4 182 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 CYTH3O43739 400 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 CUTAO60888 179 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 ELMSAN1Q6PJG2 1045 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 RAD21L1Q9H4I0 556 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 ARF4P18085 180 aaPredicted RBP8.61□□□□□ -1.03
SCN8A-201ENST00000354534 DHX32Q7L7V1 743 aaKnown RBP8.61□□□□□ -1.03
SCN8A-201ENST00000354534 LIG4P49917 911 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 ATP12AP54707 1039 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 MORC3Q14149 939 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 DENND6AQ8IWF6 608 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 PPM1KQ8N3J5 372 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 ZNF507Q8TCN5 953 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 ZNF556Q9HAH1 456 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 IGHDP01880 384 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 CAPZA2P47755 286 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 RBBP7Q16576 425 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 NDUFA5Q16718 116 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 NBPF9Q3BBW0 867 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 KDRP35968 1356 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 HNRNPH2P55795 449 aaKnown RBP8.61□□□□□ -1.03
SCN8A-201ENST00000354534 LBRQ14739 615 aaKnown RBP8.61□□□□□ -1.03
SCN8A-201ENST00000354534 STAMBPL1Q96FJ0 436 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 MYH10P35580 1976 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 EPHB1P54762 984 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 SPARCL1Q14515 664 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 FMO2Q99518 471 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 SEL1LQ9UBV2 794 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 PCDHB4Q9Y5E5 795 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 IGF1RP08069 1367 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 IL10P22301 178 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 TPP2P29144 1249 aaPredicted RBP8.61□□□□□ -1.03
SCN8A-201ENST00000354534 PPARGP37231 505 aaPredicted RBP8.61□□□□□ -1.03
SCN8A-201ENST00000354534 TRIM16LQ309B1 348 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 CABP7Q86V35 215 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 ARL10Q8N8L6 244 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 KDM4CQ9H3R0 1056 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 CYLC2Q14093 348 aaPredicted RBP8.61□□□□□ -1.03
SCN8A-201ENST00000354534 ZNF654Q8IZM8 581 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 CLEC4FQ8N1N0 589 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 PYROXD1Q8WU10 500 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 TUBGCP2Q9BSJ2 902 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 ZCWPW1Q9H0M4 648 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 STK25O00506 426 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 SNPHO15079 494 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 DTNBO60941 627 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 DEXIO95424 95 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 CCDC184Q52MB2 194 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 TTC38Q5R3I4 469 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 UXS1Q8NBZ7 420 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 MBIPQ9NS73 344 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 SETD1BQ9UPS6 1966 aaKnown RBP8.61□□□□□ -1.03
SCN8A-201ENST00000354534 CCDC195A0A1B0GUA6 201 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 PI4KAP2A4QPH2 592 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 PCP4L1A6NKN8 68 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 PRPF4O43172 522 aaKnown RBP eCLIP8.61□□□□□ -1.03
SCN8A-201ENST00000354534 SRGAP2CP0DJJ0 459 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 IGBP1P78318 339 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 PARP9Q8IXQ6 854 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 PI4KAP1Q8N8J0 262 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 SUPT20HQ8NEM7 779 aa8.61□□□□□ -1.03
SCN8A-201ENST00000354534 GANCQ8TET4 914 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms