RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 KCNH5Q8NCM2 988 aa8.94□□□□□ -0.98
UBE2D3-204ENST00000349311 PI4K2BQ8TCG2 481 aa8.94□□□□□ -0.98
UBE2D3-204ENST00000349311 TSR2Q969E8 191 aaKnown RBP8.94□□□□□ -0.98
UBE2D3-204ENST00000349311 KIF1BPQ96EK5 621 aa8.94□□□□□ -0.98
UBE2D3-204ENST00000349311 ASCC2Q9H1I8 757 aaPredicted RBP8.94□□□□□ -0.98
UBE2D3-204ENST00000349311 KDRP35968 1356 aa8.94□□□□□ -0.98
UBE2D3-204ENST00000349311 RPAP1Q9BWH6 1393 aaPredicted RBP8.94□□□□□ -0.98
UBE2D3-204ENST00000349311 RGS12O14924 1447 aa8.94□□□□□ -0.98
UBE2D3-204ENST00000349311 ERICH4A6NGS2 130 aa8.93□□□□□ -0.98
UBE2D3-204ENST00000349311 ATP2B1P20020 1258 aa8.93□□□□□ -0.98
UBE2D3-204ENST00000349311 TMPOP42166 694 aaKnown RBP8.93□□□□□ -0.98
UBE2D3-204ENST00000349311 MMP14P50281 582 aa8.93□□□□□ -0.98
UBE2D3-204ENST00000349311 GPS2Q13227 327 aa8.93□□□□□ -0.98
UBE2D3-204ENST00000349311 NCAPHQ15003 741 aa8.93□□□□□ -0.98
UBE2D3-204ENST00000349311 TPD52L1Q16890 204 aaPredicted RBP8.93□□□□□ -0.98
UBE2D3-204ENST00000349311 KIAA1211LQ6NV74 962 aa8.93□□□□□ -0.98
UBE2D3-204ENST00000349311 RNF111Q6ZNA4 994 aa8.93□□□□□ -0.98
UBE2D3-204ENST00000349311 HNRNPLLQ8WVV9 542 aaKnown RBP8.93□□□□□ -0.98
UBE2D3-204ENST00000349311 ORAI2Q96SN7 254 aa8.93□□□□□ -0.98
UBE2D3-204ENST00000349311 FUCA2Q9BTY2 467 aa8.93□□□□□ -0.98
UBE2D3-204ENST00000349311 API5Q9BZZ5 524 aaKnown RBP8.93□□□□□ -0.98
UBE2D3-204ENST00000349311 DCTPP1Q9H773 170 aa8.93□□□□□ -0.98
UBE2D3-204ENST00000349311 PRDM7Q9NQW5 492 aa8.93□□□□□ -0.98
UBE2D3-204ENST00000349311 IFT57Q9NWB7 429 aa8.93□□□□□ -0.98
UBE2D3-204ENST00000349311 WHRNQ9P202 907 aa8.93□□□□□ -0.98
UBE2D3-204ENST00000349311 FBXL21Q9UKT6 434 aa8.93□□□□□ -0.98
UBE2D3-204ENST00000349311 MAP3K19Q56UN5 1328 aa8.93□□□□□ -0.98
UBE2D3-204ENST00000349311 NPHP3Q7Z494 1330 aa8.93□□□□□ -0.98
UBE2D3-204ENST00000349311 PLEKHG2Q9H7P9 1386 aa8.93□□□□□ -0.98
UBE2D3-204ENST00000349311 NCAPD2Q15021 1401 aa8.93□□□□□ -0.98
UBE2D3-204ENST00000349311 TNS3Q68CZ2 1445 aa8.93□□□□□ -0.98
UBE2D3-204ENST00000349311 LRRC37A3O60309 1634 aa8.92□□□□□ -0.98
UBE2D3-204ENST00000349311 ABCC4O15439 1325 aa8.92□□□□□ -0.98
UBE2D3-204ENST00000349311 ZNF335Q9H4Z2 1342 aaPredicted RBP8.92□□□□□ -0.98
UBE2D3-204ENST00000349311 CLGNO14967 610 aa8.92□□□□□ -0.98
UBE2D3-204ENST00000349311 EPB41L2O43491 1005 aaKnown RBP8.92□□□□□ -0.98
UBE2D3-204ENST00000349311 EPHX1P07099 455 aa8.92□□□□□ -0.98
UBE2D3-204ENST00000349311 BMP8BP34820 402 aa8.92□□□□□ -0.98
UBE2D3-204ENST00000349311 RAB33AQ14088 237 aa8.92□□□□□ -0.98
UBE2D3-204ENST00000349311 CLEC16AQ2KHT3 1053 aa8.92□□□□□ -0.98
UBE2D3-204ENST00000349311 MRM1Q6IN84 353 aaKnown RBP8.92□□□□□ -0.98
UBE2D3-204ENST00000349311 C6orf15Q6UXA7 325 aaPredicted RBP8.92□□□□□ -0.98
UBE2D3-204ENST00000349311 FAM178BQ8IXR5 827 aa8.92□□□□□ -0.98
UBE2D3-204ENST00000349311 CELF2-AS1Q8N7Q2 184 aa8.92□□□□□ -0.98
UBE2D3-204ENST00000349311 IL17RAQ96F46 866 aa8.92□□□□□ -0.98
UBE2D3-204ENST00000349311 RCC1LQ96I51 464 aaKnown RBP8.92□□□□□ -0.98
UBE2D3-204ENST00000349311 ALPK1Q96QP1 1244 aa8.92□□□□□ -0.98
UBE2D3-204ENST00000349311 SP110Q9HB58 689 aa8.92□□□□□ -0.98
UBE2D3-204ENST00000349311 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.92□□□□□ -0.98
UBE2D3-204ENST00000349311 AHDC1Q5TGY3 1603 aaPredicted RBP8.91□□□□□ -0.98
UBE2D3-204ENST00000349311 COL22A1Q8NFW1 1626 aaPredicted RBP8.91□□□□□ -0.98
UBE2D3-204ENST00000349311 IGSF1Q8N6C5 1336 aa8.91□□□□□ -0.98
UBE2D3-204ENST00000349311 TMEM82A0PJX8 343 aa8.91□□□□□ -0.98
UBE2D3-204ENST00000349311 ATP8B1O43520 1251 aa8.91□□□□□ -0.98
UBE2D3-204ENST00000349311 SLU7O95391 586 aaKnown RBP8.91□□□□□ -0.98
UBE2D3-204ENST00000349311 TUBB4AP04350 444 aa8.91□□□□□ -0.98
UBE2D3-204ENST00000349311 PTGS1P23219 599 aa8.91□□□□□ -0.98
UBE2D3-204ENST00000349311 NEK4P51957 841 aa8.91□□□□□ -0.98
UBE2D3-204ENST00000349311 HNRNPH2P55795 449 aaKnown RBP8.91□□□□□ -0.98
UBE2D3-204ENST00000349311 EGR3Q06889 387 aa8.91□□□□□ -0.98
UBE2D3-204ENST00000349311 EIF4A2Q14240 407 aaKnown RBP8.91□□□□□ -0.98
UBE2D3-204ENST00000349311 RRS1Q15050 365 aaKnown RBP8.91□□□□□ -0.98
UBE2D3-204ENST00000349311 FXNQ16595 210 aa8.91□□□□□ -0.98
UBE2D3-204ENST00000349311 KRT28Q7Z3Y7 464 aa8.91□□□□□ -0.98
UBE2D3-204ENST00000349311 DRC7Q8IY82 874 aa8.91□□□□□ -0.98
UBE2D3-204ENST00000349311 ARHGEF39Q8N4T4 335 aa8.91□□□□□ -0.98
UBE2D3-204ENST00000349311 SPC24Q8NBT2 197 aa8.91□□□□□ -0.98
UBE2D3-204ENST00000349311 LRRN4CLQ8ND94 238 aa8.91□□□□□ -0.98
UBE2D3-204ENST00000349311 LINC01599Q8WXQ3 324 aa8.91□□□□□ -0.98
UBE2D3-204ENST00000349311 G6PC3Q9BUM1 346 aa8.91□□□□□ -0.98
UBE2D3-204ENST00000349311 ARGLU1Q9NWB6 273 aaPredicted RBP8.91□□□□□ -0.98
UBE2D3-204ENST00000349311 EBF1Q9UH73 591 aa8.91□□□□□ -0.98
UBE2D3-204ENST00000349311 MSRB2Q9Y3D2 182 aa8.91□□□□□ -0.98
UBE2D3-204ENST00000349311 RAD50Q92878 1312 aa8.9□□□□□ -0.98
UBE2D3-204ENST00000349311 DNAJC25-GNG10A0A024R161 153 aa8.9□□□□□ -0.98
UBE2D3-204ENST00000349311 ANKRD34BA5PLL1 514 aa8.9□□□□□ -0.98
UBE2D3-204ENST00000349311 U2SURPO15042 1029 aaKnown RBP8.9□□□□□ -0.98
UBE2D3-204ENST00000349311 ZNF205O95201 554 aa8.9□□□□□ -0.98
UBE2D3-204ENST00000349311 CAVIN2O95810 425 aa8.9□□□□□ -0.98
UBE2D3-204ENST00000349311 GSNP06396 782 aa8.9□□□□□ -0.98
UBE2D3-204ENST00000349311 ITGA4P13612 1032 aa8.9□□□□□ -0.98
UBE2D3-204ENST00000349311 ITGB5P18084 799 aa8.9□□□□□ -0.98
UBE2D3-204ENST00000349311 FBLN1P23142 703 aa8.9□□□□□ -0.98
UBE2D3-204ENST00000349311 TCEAL1Q15170 157 aa8.9□□□□□ -0.98
UBE2D3-204ENST00000349311 SF3A1Q15459 793 aaKnown RBP8.9□□□□□ -0.98
UBE2D3-204ENST00000349311 RALGPS1Q5JS13 557 aa8.9□□□□□ -0.98
UBE2D3-204ENST00000349311 NBPF6Q5VWK0 638 aa8.9□□□□□ -0.98
UBE2D3-204ENST00000349311 HEATR6Q6AI08 1181 aaKnown RBP8.9□□□□□ -0.98
UBE2D3-204ENST00000349311 FLAD1Q8NFF5 587 aa8.9□□□□□ -0.98
UBE2D3-204ENST00000349311 SREK1Q8WXA9 508 aaKnown RBP8.9□□□□□ -0.98
UBE2D3-204ENST00000349311 NBPF4Q96M43 638 aa8.9□□□□□ -0.98
UBE2D3-204ENST00000349311 C16orf45Q96MC5 204 aaPredicted RBP8.9□□□□□ -0.98
UBE2D3-204ENST00000349311 CHMP4AQ9BY43 222 aa8.9□□□□□ -0.98
UBE2D3-204ENST00000349311 FAM86C1Q9NVL1 165 aa8.9□□□□□ -0.98
UBE2D3-204ENST00000349311 TCFL5Q9UL49 500 aa8.9□□□□□ -0.98
UBE2D3-204ENST00000349311 CTNND2Q9UQB3 1225 aa8.9□□□□□ -0.98
UBE2D3-204ENST00000349311 DIS3Q9Y2L1 958 aaKnown RBP8.9□□□□□ -0.98
UBE2D3-204ENST00000349311 V9GYY5 206 aaPredicted RBP8.9□□□□□ -0.98
UBE2D3-204ENST00000349311 ELP1O95163 1332 aa8.89□□□□□ -0.99
UBE2D3-204ENST00000349311 ADAMTS7Q9UKP4 1686 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms