RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 MEI1Q5TIA1 1274 aa11.31□□□□□ -0.6
CHRNA1-202ENST00000348749 FOXR2Q6PJQ5 311 aa11.31□□□□□ -0.6
CHRNA1-202ENST00000348749 PIGWQ7Z7B1 504 aa11.31□□□□□ -0.6
CHRNA1-202ENST00000348749 OR2W6PQ8NHA6 318 aa11.31□□□□□ -0.6
CHRNA1-202ENST00000348749 ITFG2Q969R8 447 aa11.31□□□□□ -0.6
CHRNA1-202ENST00000348749 PSMD1Q99460 953 aa11.31□□□□□ -0.6
CHRNA1-202ENST00000348749 ARPP21Q9UBL0 812 aaPredicted RBP11.31□□□□□ -0.6
CHRNA1-202ENST00000348749 AFF2P51816 1311 aa11.31□□□□□ -0.6
CHRNA1-202ENST00000348749 CLTAP09496 248 aa11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 UBA7P41226 1012 aa11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 RAB27AP51159 221 aa11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 MAGOHP61326 146 aaKnown RBP11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 IFI16Q16666 785 aaKnown RBP11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 NAALADL2Q58DX5 795 aa11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 SPDYCQ5MJ68 293 aa11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 SUSD4Q5VX71 490 aa11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 ADGRA1Q86SQ6 560 aa11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 SPDYE1Q8NFV5 336 aaPredicted RBP11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 MAGOHBQ96A72 148 aaKnown RBP11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 SLC4A9Q96Q91 983 aa11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 EDEM3Q9BZQ6 932 aa11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 PCDHGC5Q9Y5F6 944 aa11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 MYH7BA7E2Y1 1941 aa11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 M0R2N6 131 aa11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 BUB1O43683 1085 aa11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 FGFR1OPO95684 399 aaKnown RBP11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 NQO1P15559 274 aaKnown RBP11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 RPS6KA3P51812 740 aa11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 AMPD3Q01432 767 aa11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 RASSF7Q02833 373 aa11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 KIAA0753Q2KHM9 967 aa11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 CAVIN4Q5BKX8 364 aa11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 DGKHQ86XP1 1220 aa11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 ZBTB10Q96DT7 871 aa11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 CALR3Q96L12 384 aaKnown RBP11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 FAM210AQ96ND0 272 aa11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 C7orf25Q9BPX7 421 aa11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 CRNKL1Q9BZJ0 848 aaKnown RBP11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 L3MBTL1Q9Y468 752 aa11.3□□□□□ -0.6
CHRNA1-202ENST00000348749 CCDC194A0A1B0GVG4 234 aa11.29□□□□□ -0.6
CHRNA1-202ENST00000348749 BACH1O14867 736 aa11.29□□□□□ -0.6
CHRNA1-202ENST00000348749 PALMO75781 387 aa11.29□□□□□ -0.6
CHRNA1-202ENST00000348749 LINGO3P0C6S8 592 aa11.29□□□□□ -0.6
CHRNA1-202ENST00000348749 SLC1A4P43007 532 aa11.29□□□□□ -0.6
CHRNA1-202ENST00000348749 EIF3BP55884 814 aaKnown RBP11.29□□□□□ -0.6
CHRNA1-202ENST00000348749 SEPT2Q15019 361 aa11.29□□□□□ -0.6
CHRNA1-202ENST00000348749 NAB2Q15742 525 aa11.29□□□□□ -0.6
CHRNA1-202ENST00000348749 PDCD2Q16342 344 aaPredicted RBP11.29□□□□□ -0.6
CHRNA1-202ENST00000348749 SLC5A9Q2M3M2 681 aa11.29□□□□□ -0.6
CHRNA1-202ENST00000348749 ANKRD40Q6AI12 368 aa11.29□□□□□ -0.6
CHRNA1-202ENST00000348749 PDXDC1Q6P996 788 aa11.29□□□□□ -0.6
CHRNA1-202ENST00000348749 TRPM8Q7Z2W7 1104 aa11.29□□□□□ -0.6
CHRNA1-202ENST00000348749 CCDC84Q86UT8 332 aaPredicted RBP11.29□□□□□ -0.6
CHRNA1-202ENST00000348749 PNMA8AQ86V59 439 aaPredicted RBP11.29□□□□□ -0.6
CHRNA1-202ENST00000348749 APLFQ8IW19 511 aaPredicted RBP11.29□□□□□ -0.6
CHRNA1-202ENST00000348749 MFN1Q8IWA4 741 aa11.29□□□□□ -0.6
CHRNA1-202ENST00000348749 TEX9Q8N6V9 391 aa11.29□□□□□ -0.6
CHRNA1-202ENST00000348749 SCFD2Q8WU76 684 aa11.29□□□□□ -0.6
CHRNA1-202ENST00000348749 BAP1Q92560 729 aa11.29□□□□□ -0.6
CHRNA1-202ENST00000348749 LZTS2Q9BRK4 669 aa11.29□□□□□ -0.6
CHRNA1-202ENST00000348749 LUC7LQ9NQ29 371 aaKnown RBP11.29□□□□□ -0.6
CHRNA1-202ENST00000348749 PANK4Q9NVE7 773 aa11.29□□□□□ -0.6
CHRNA1-202ENST00000348749 FBXL5Q9UKA1 691 aa11.29□□□□□ -0.6
CHRNA1-202ENST00000348749 CASZ1Q86V15 1759 aa11.29□□□□□ -0.6
CHRNA1-202ENST00000348749 GOLGA6L10A0A0M3HER8 536 aa11.28□□□□□ -0.6
CHRNA1-202ENST00000348749 hCG_1642624A0A1W2PR95 340 aa11.28□□□□□ -0.6
CHRNA1-202ENST00000348749 LRRC53A6NM62 1247 aa11.28□□□□□ -0.6
CHRNA1-202ENST00000348749 ENO4A6NNW6 628 aa11.28□□□□□ -0.6
CHRNA1-202ENST00000348749 EPHB6O15197 1021 aa11.28□□□□□ -0.6
CHRNA1-202ENST00000348749 RGL2O15211 777 aa11.28□□□□□ -0.6
CHRNA1-202ENST00000348749 DIAPH2O60879 1101 aa11.28□□□□□ -0.6
CHRNA1-202ENST00000348749 AP1G2O75843 785 aa11.28□□□□□ -0.6
CHRNA1-202ENST00000348749 NEFHP12036 1026 aa11.28□□□□□ -0.6
CHRNA1-202ENST00000348749 VWA3BQ502W6 1294 aa11.28□□□□□ -0.6
CHRNA1-202ENST00000348749 CNNM4Q6P4Q7 775 aa11.28□□□□□ -0.6
CHRNA1-202ENST00000348749 TBC1D1Q86TI0 1168 aaPredicted RBP11.28□□□□□ -0.6
CHRNA1-202ENST00000348749 ANKRD13CQ8N6S4 541 aa11.28□□□□□ -0.6
CHRNA1-202ENST00000348749 CCDC134Q9H6E4 229 aa11.28□□□□□ -0.6
CHRNA1-202ENST00000348749 ABCF2Q9UG63 623 aa11.28□□□□□ -0.6
CHRNA1-202ENST00000348749 USP17L12C9JPN9 530 aa11.28□□□□□ -0.6
CHRNA1-202ENST00000348749 USP17L21D6R901 530 aa11.28□□□□□ -0.6
CHRNA1-202ENST00000348749 SART1O43290 800 aaKnown RBP11.28□□□□□ -0.6
CHRNA1-202ENST00000348749 CTNND1O60716 968 aaKnown RBP11.28□□□□□ -0.6
CHRNA1-202ENST00000348749 NTSR2O95665 410 aa11.28□□□□□ -0.6
CHRNA1-202ENST00000348749 FERP16591 822 aa11.28□□□□□ -0.6
CHRNA1-202ENST00000348749 ZNF131P52739 623 aa11.28□□□□□ -0.6
CHRNA1-202ENST00000348749 GFPT1Q06210 699 aaPredicted RBP11.28□□□□□ -0.6
CHRNA1-202ENST00000348749 TMC3Q7Z5M5 1100 aa11.28□□□□□ -0.6
CHRNA1-202ENST00000348749 KLHL7Q8IXQ5 586 aa11.28□□□□□ -0.6
CHRNA1-202ENST00000348749 STAG2Q8N3U4 1231 aa11.28□□□□□ -0.6
CHRNA1-202ENST00000348749 UBLCP1Q8WVY7 318 aaPredicted RBP11.28□□□□□ -0.6
CHRNA1-202ENST00000348749 TCP11L1Q9NUJ3 509 aa11.28□□□□□ -0.6
CHRNA1-202ENST00000348749 ZFATQ9P243 1243 aa11.28□□□□□ -0.6
CHRNA1-202ENST00000348749 CCDC88AQ3V6T2 1871 aa11.28□□□□□ -0.6
CHRNA1-202ENST00000348749 COL1A1P02452 1464 aaPredicted RBP11.27□□□□□ -0.6
CHRNA1-202ENST00000348749 DCDC2CA8MYV0 355 aa11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 F8VZ95 297 aa11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 ABLIM1O14639 778 aa11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 FTCDO95954 541 aa11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 NCALDP61601 193 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms