RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 MYCP01106 439 aaPredicted RBP11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 MRPS15P82914 257 aaKnown RBP11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 CACNB1Q02641 598 aaPredicted RBP11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 RNASELQ05823 741 aaKnown RBP11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 ADAT2Q7Z6V5 191 aaKnown RBP11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 MCF2L2Q86YR7 1114 aa11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 CCDC125Q86Z20 511 aa11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 GORASP1Q9BQQ3 440 aa11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 TUBB6Q9BUF5 446 aa11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 LSG1Q9H089 658 aaKnown RBP11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 PCDHA7Q9UN72 937 aa11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 MTMR6Q9Y217 621 aa11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 SYNJ2BP-COX16A0A087WUM0 186 aa11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 ARHGAP42A6NI28 874 aa11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 LPXNO60711 386 aa11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 SERPINB6P35237 376 aa11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 DHX9Q08211 1270 aaKnown RBP11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 LCORLQ8N3X6 602 aa11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 CCDC89Q8N998 374 aa11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 COX16Q9P0S2 106 aa11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 ADCY3O60266 1144 aa11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 OATP04181 439 aa11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 P4HA1P13674 534 aa11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 KCNA3P22001 575 aa11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 OCA2Q04671 838 aa11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 KIF22Q14807 665 aa11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 CFAP221Q4G0U5 840 aa11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 DYNLL2Q96FJ2 89 aa11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 HIC2Q96JB3 615 aa11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 SUCLA2Q9P2R7 463 aaPredicted RBP11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 ANGPTL3Q9Y5C1 460 aa11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 NAA30Q147X3 362 aaPredicted RBP11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 TRIML2Q8N7C3 387 aa11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 COPRSQ9NQ92 184 aa11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 SEPT9Q9UHD8 586 aaPredicted RBP11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 KIAA1024Q9UPX6 916 aa11.98□□□□□ -0.49
SMARCE1-202ENST00000348513 TBC1D8O95759 1140 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 RFX1P22670 979 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 SNAP25P60880 206 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 RCN1Q15293 331 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 UBE3CQ15386 1083 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 POTEEQ6S8J3 1075 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 CCDC84Q86UT8 332 aaPredicted RBP11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 BHMTQ93088 406 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 GJA10Q969M2 543 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 FBXO9Q9UK97 447 aaPredicted RBP11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 PRELID1Q9Y255 219 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 RPN1P04843 607 aaKnown RBP11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 POLR2FP61218 127 aaKnown RBP11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 PTPN21Q16825 1174 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 ARMCX5Q6P1M9 558 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 ZNF449Q6P9G9 518 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 TMEM110Q86TL2 294 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 HACE1Q8IYU2 909 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 CACTINQ8WUQ7 758 aaKnown RBP11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 NSMCE1Q8WV22 266 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 PIGBQ92521 554 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 R3HDM2Q9Y2K5 976 aaKnown RBP11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 WDR17Q8IZU2 1322 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 ZNF335Q9H4Z2 1342 aaPredicted RBP11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 NBPF26B4DH59 902 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 MAN1A1P33908 653 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 MSH2P43246 934 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 RPS6KA3P51812 740 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 DMP1Q13316 513 aaPredicted RBP11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 DPP9Q86TI2 863 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 NBPF15Q8N660 670 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 BBOF1Q8ND07 529 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 OMA1Q96E52 524 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 PDP2Q9P2J9 529 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 TARSL2A2RTX5 802 aaKnown RBP11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 TNNC2P02585 160 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 USP17L8P0C7I0 530 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 STAT1P42224 750 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 PDCLQ13371 301 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 ZMYM1Q5SVZ6 1142 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 KSR1Q8IVT5 923 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 MRPL46Q9H2W6 279 aaKnown RBP11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 NRDE2Q9H7Z3 1164 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 LEMD3Q9Y2U8 911 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 GCC2Q8IWJ2 1684 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 IGSF1Q8N6C5 1336 aa11.97□□□□□ -0.49
SMARCE1-202ENST00000348513 CIAO1O76071 339 aa11.96□□□□□ -0.49
SMARCE1-202ENST00000348513 GNA14O95837 355 aa11.96□□□□□ -0.49
SMARCE1-202ENST00000348513 KRT81Q14533 505 aa11.96□□□□□ -0.49
SMARCE1-202ENST00000348513 SYCE1Q8N0S2 351 aa11.96□□□□□ -0.49
SMARCE1-202ENST00000348513 PPM1KQ8N3J5 372 aa11.96□□□□□ -0.49
SMARCE1-202ENST00000348513 PIP4K2CQ8TBX8 421 aa11.96□□□□□ -0.49
SMARCE1-202ENST00000348513 LRRC8CQ8TDW0 803 aa11.96□□□□□ -0.49
SMARCE1-202ENST00000348513 DACT3Q96B18 629 aaPredicted RBP11.96□□□□□ -0.49
SMARCE1-202ENST00000348513 PUS7LQ9H0K6 701 aaKnown RBP11.96□□□□□ -0.49
SMARCE1-202ENST00000348513 VPS37BQ9H9H4 285 aa11.96□□□□□ -0.49
SMARCE1-202ENST00000348513 EEPD1Q7L9B9 569 aa11.96□□□□□ -0.49
SMARCE1-202ENST00000348513 NLRP10Q86W26 655 aa11.96□□□□□ -0.49
SMARCE1-202ENST00000348513 ANKRD42Q8N9B4 389 aa11.96□□□□□ -0.49
SMARCE1-202ENST00000348513 PPP1R16BQ96T49 567 aa11.96□□□□□ -0.49
SMARCE1-202ENST00000348513 ECT2Q9H8V3 914 aa11.96□□□□□ -0.49
SMARCE1-202ENST00000348513 RABL2BQ9UNT1 228 aa11.96□□□□□ -0.49
SMARCE1-202ENST00000348513 TRPA1O75762 1119 aa11.96□□□□□ -0.49
SMARCE1-202ENST00000348513 IFNB1P01574 187 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms