RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 HAUS3Q68CZ6 603 aa30.4■■■□□ 2.46
SSBP4-202ENST00000348495 PDILTQ8N807 584 aa30.4■■■□□ 2.46
SSBP4-202ENST00000348495 RDM1Q8NG50 284 aa30.4■■■□□ 2.46
SSBP4-202ENST00000348495 PNMA5Q96PV4 448 aa30.4■■■□□ 2.46
SSBP4-202ENST00000348495 EIF2AK1Q9BQI3 630 aaKnown RBP30.4■■■□□ 2.46
SSBP4-202ENST00000348495 POLR3CQ9BUI4 534 aaPredicted RBP30.4■■■□□ 2.46
SSBP4-202ENST00000348495 CCDC39Q9UFE4 941 aa30.4■■■□□ 2.46
SSBP4-202ENST00000348495 RPA1P27694 616 aa30.39■■■□□ 2.46
SSBP4-202ENST00000348495 IQSEC1Q6DN90 963 aa30.39■■■□□ 2.46
SSBP4-202ENST00000348495 MIER3Q7Z3K6 550 aa30.39■■■□□ 2.46
SSBP4-202ENST00000348495 SMAP1Q8IYB5 467 aaPredicted RBP30.39■■■□□ 2.46
SSBP4-202ENST00000348495 TCEAL9Q9UHQ7 104 aa30.39■■■□□ 2.46
SSBP4-202ENST00000348495 TELO2Q9Y4R8 837 aa30.39■■■□□ 2.46
SSBP4-202ENST00000348495 WDR64B1ANS9 1081 aa30.39■■■□□ 2.45
SSBP4-202ENST00000348495 MED24O75448 989 aa30.39■■■□□ 2.45
SSBP4-202ENST00000348495 CCT6AP40227 531 aaKnown RBP30.39■■■□□ 2.45
SSBP4-202ENST00000348495 PRMT2P55345 433 aa30.39■■■□□ 2.45
SSBP4-202ENST00000348495 ECM1Q16610 540 aa30.39■■■□□ 2.45
SSBP4-202ENST00000348495 CCDC144BQ3MJ40 725 aa30.39■■■□□ 2.45
SSBP4-202ENST00000348495 CATSPER3Q86XQ3 398 aa30.39■■■□□ 2.45
SSBP4-202ENST00000348495 PYM1Q9BRP8 204 aaKnown RBP30.39■■■□□ 2.45
SSBP4-202ENST00000348495 DDX19AQ9NUU7 478 aaKnown RBP30.39■■■□□ 2.45
SSBP4-202ENST00000348495 C11orf97A0A1B0GVM6 126 aaPredicted RBP30.38■■■□□ 2.45
SSBP4-202ENST00000348495 ACTR2P61160 394 aa30.38■■■□□ 2.45
SSBP4-202ENST00000348495 LONRF3Q496Y0 759 aa30.38■■■□□ 2.45
SSBP4-202ENST00000348495 DUSP28Q4G0W2 176 aa30.38■■■□□ 2.45
SSBP4-202ENST00000348495 TMEM119Q4V9L6 283 aa30.38■■■□□ 2.45
SSBP4-202ENST00000348495 MFSD14CQ5VZR4 134 aa30.38■■■□□ 2.45
SSBP4-202ENST00000348495 LRRC15Q8TF66 581 aa30.38■■■□□ 2.45
SSBP4-202ENST00000348495 CALML4Q96GE6 196 aa30.38■■■□□ 2.45
SSBP4-202ENST00000348495 TIGD1Q96MW7 591 aa30.38■■■□□ 2.45
SSBP4-202ENST00000348495 ACTN4O43707 911 aaKnown RBP30.37■■■□□ 2.45
SSBP4-202ENST00000348495 SORBS3O60504 671 aa30.37■■■□□ 2.45
SSBP4-202ENST00000348495 SMPD1P17405 629 aa30.37■■■□□ 2.45
SSBP4-202ENST00000348495 PLCG1P19174 1290 aa30.37■■■□□ 2.45
SSBP4-202ENST00000348495 NAALADL2Q58DX5 795 aa30.37■■■□□ 2.45
SSBP4-202ENST00000348495 COPS5Q92905 334 aa30.37■■■□□ 2.45
SSBP4-202ENST00000348495 RGL1Q9NZL6 768 aa30.37■■■□□ 2.45
SSBP4-202ENST00000348495 KDM3AQ9Y4C1 1321 aa30.37■■■□□ 2.45
SSBP4-202ENST00000348495 KINO60870 393 aaKnown RBP30.36■■■□□ 2.45
SSBP4-202ENST00000348495 SLITRK3O94933 977 aa30.36■■■□□ 2.45
SSBP4-202ENST00000348495 ATG7O95352 703 aa30.36■■■□□ 2.45
SSBP4-202ENST00000348495 ARHGAP1Q07960 439 aa30.36■■■□□ 2.45
SSBP4-202ENST00000348495 IQUBQ8NA54 791 aa30.36■■■□□ 2.45
SSBP4-202ENST00000348495 NEK9Q8TD19 979 aa30.36■■■□□ 2.45
SSBP4-202ENST00000348495 PXYLP1Q8TE99 480 aa30.36■■■□□ 2.45
SSBP4-202ENST00000348495 DHX58Q96C10 678 aa30.36■■■□□ 2.45
SSBP4-202ENST00000348495 TUFT1Q9NNX1 390 aa30.36■■■□□ 2.45
SSBP4-202ENST00000348495 USP25Q9UHP3 1055 aa30.36■■■□□ 2.45
SSBP4-202ENST00000348495 PCDHA10Q9Y5I2 948 aa30.36■■■□□ 2.45
SSBP4-202ENST00000348495 ADCY6O43306 1168 aa30.36■■■□□ 2.45
SSBP4-202ENST00000348495 CYBAP13498 195 aa30.36■■■□□ 2.45
SSBP4-202ENST00000348495 ZRSR1Q15695 479 aaKnown RBP30.36■■■□□ 2.45
SSBP4-202ENST00000348495 RRAGBQ5VZM2 374 aa30.36■■■□□ 2.45
SSBP4-202ENST00000348495 ABHD15Q6UXT9 468 aa30.36■■■□□ 2.45
SSBP4-202ENST00000348495 KRBA2Q6ZNG9 492 aa30.36■■■□□ 2.45
SSBP4-202ENST00000348495 TRPV1Q8NER1 839 aa30.36■■■□□ 2.45
SSBP4-202ENST00000348495 EMID1Q96A84 441 aaPredicted RBP30.36■■■□□ 2.45
SSBP4-202ENST00000348495 DYDC2Q96IM9 177 aa30.36■■■□□ 2.45
SSBP4-202ENST00000348495 MLXIPQ9HAP2 919 aa30.36■■■□□ 2.45
SSBP4-202ENST00000348495 TMEM63CQ9P1W3 806 aa30.36■■■□□ 2.45
SSBP4-202ENST00000348495 POTEB3A0JP26 581 aa30.35■■■□□ 2.45
SSBP4-202ENST00000348495 NKRFO15226 690 aaKnown RBP eCLIP30.35■■■□□ 2.452e-6■□□□□ 10.9
SSBP4-202ENST00000348495 ADCY3O60266 1144 aa30.35■■■□□ 2.45
SSBP4-202ENST00000348495 ELNP15502 786 aa30.35■■■□□ 2.45
SSBP4-202ENST00000348495 PDXDC2PQ6P474 469 aa30.35■■■□□ 2.45
SSBP4-202ENST00000348495 POTEBQ6S5H4 581 aa30.35■■■□□ 2.45
SSBP4-202ENST00000348495 DHX37Q8IY37 1157 aaKnown RBP30.35■■■□□ 2.45
SSBP4-202ENST00000348495 RASSF8Q8NHQ8 419 aa30.35■■■□□ 2.45
SSBP4-202ENST00000348495 PLIN2Q99541 437 aa30.35■■■□□ 2.45
SSBP4-202ENST00000348495 NT5C3AQ9H0P0 336 aa30.35■■■□□ 2.45
SSBP4-202ENST00000348495 SERTAD1Q9UHV2 236 aa30.35■■■□□ 2.45
SSBP4-202ENST00000348495 SAMM50Q9Y512 469 aa30.35■■■□□ 2.45
SSBP4-202ENST00000348495 MUTP22033 750 aa30.34■■■□□ 2.45
SSBP4-202ENST00000348495 PTGS1P23219 599 aa30.34■■■□□ 2.45
SSBP4-202ENST00000348495 SP4Q02446 784 aa30.34■■■□□ 2.45
SSBP4-202ENST00000348495 CYP4A11Q02928 519 aa30.34■■■□□ 2.45
SSBP4-202ENST00000348495 TNFAIP2Q03169 654 aa30.34■■■□□ 2.45
SSBP4-202ENST00000348495 GJC2Q5T442 439 aaPredicted RBP30.34■■■□□ 2.45
SSBP4-202ENST00000348495 CAVIN1Q6NZI2 390 aaKnown RBP30.34■■■□□ 2.45
SSBP4-202ENST00000348495 RAET1EQ8TD07 263 aa30.34■■■□□ 2.45
SSBP4-202ENST00000348495 CLSTN2Q9H4D0 955 aa30.34■■■□□ 2.45
SSBP4-202ENST00000348495 GSTTP1A0A1W2PQM5 241 aa30.33■■■□□ 2.45
SSBP4-202ENST00000348495 GH1P01241 217 aa30.33■■■□□ 2.45
SSBP4-202ENST00000348495 P4HBP07237 508 aaKnown RBP30.33■■■□□ 2.45
SSBP4-202ENST00000348495 SLFN14P0C7P3 912 aa30.33■■■□□ 2.45
SSBP4-202ENST00000348495 STAT6P42226 847 aa30.33■■■□□ 2.45
SSBP4-202ENST00000348495 TRIM32Q13049 653 aa30.33■■■□□ 2.45
SSBP4-202ENST00000348495 LAMC2Q13753 1193 aa30.33■■■□□ 2.45
SSBP4-202ENST00000348495 CDK5RAP3Q96JB5 506 aa30.33■■■□□ 2.45
SSBP4-202ENST00000348495 WRAP73Q9P2S5 460 aaPredicted RBP30.33■■■□□ 2.45
SSBP4-202ENST00000348495 KIAA1024Q9UPX6 916 aa30.33■■■□□ 2.45
SSBP4-202ENST00000348495 GNEQ9Y223 722 aaKnown RBP30.33■■■□□ 2.45
SSBP4-202ENST00000348495 POTEFA5A3E0 1075 aa30.33■■■□□ 2.45
SSBP4-202ENST00000348495 CTTNQ14247 550 aaKnown RBP30.33■■■□□ 2.45
SSBP4-202ENST00000348495 HSDL1Q3SXM5 330 aa30.33■■■□□ 2.45
SSBP4-202ENST00000348495 POTEGQ6S5H5 508 aa30.33■■■□□ 2.45
SSBP4-202ENST00000348495 KCNK18Q7Z418 384 aa30.33■■■□□ 2.45
SSBP4-202ENST00000348495 KCTD17Q8N5Z5 321 aa30.33■■■□□ 2.45
SSBP4-202ENST00000348495 GPR20Q99678 358 aa30.33■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms