RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 RNF139Q8WU17 664 aa12.73□□□□□ -0.37
TRAF3-201ENST00000347662 ZBTB12Q9Y330 459 aaPredicted RBP12.73□□□□□ -0.37
TRAF3-201ENST00000347662 MAGI2Q86UL8 1455 aa12.73□□□□□ -0.37
TRAF3-201ENST00000347662 CCDC157Q569K6 752 aa12.73□□□□□ -0.37
TRAF3-201ENST00000347662 CHMP1BQ7LBR1 199 aa12.73□□□□□ -0.37
TRAF3-201ENST00000347662 TRIML1Q8N9V2 468 aa12.73□□□□□ -0.37
TRAF3-201ENST00000347662 SLC10A4Q96EP9 437 aa12.73□□□□□ -0.37
TRAF3-201ENST00000347662 SELENONQ9NZV5 590 aa12.73□□□□□ -0.37
TRAF3-201ENST00000347662 KLC3Q6P597 504 aa12.73□□□□□ -0.37
TRAF3-201ENST00000347662 STX19Q8N4C7 294 aa12.73□□□□□ -0.37
TRAF3-201ENST00000347662 SLC26A7Q8TE54 656 aa12.73□□□□□ -0.37
TRAF3-201ENST00000347662 ZFP42Q96MM3 310 aa12.73□□□□□ -0.37
TRAF3-201ENST00000347662 CCDC90BQ9GZT6 254 aa12.73□□□□□ -0.37
TRAF3-201ENST00000347662 TPCN1Q9ULQ1 816 aa12.73□□□□□ -0.37
TRAF3-201ENST00000347662 ANKARQ7Z5J8 1434 aa12.73□□□□□ -0.37
TRAF3-201ENST00000347662 TMCC1O94876 653 aa12.73□□□□□ -0.37
TRAF3-201ENST00000347662 XRCC5P13010 732 aaKnown RBP12.73□□□□□ -0.37
TRAF3-201ENST00000347662 SMIM5Q71RC9 77 aa12.73□□□□□ -0.37
TRAF3-201ENST00000347662 TRIM15Q9C019 465 aa12.73□□□□□ -0.37
TRAF3-201ENST00000347662 CACNB3P54284 484 aa12.73□□□□□ -0.37
TRAF3-201ENST00000347662 PPM1KQ8N3J5 372 aa12.73□□□□□ -0.37
TRAF3-201ENST00000347662 SH3KBP1Q96B97 665 aa12.73□□□□□ -0.37
TRAF3-201ENST00000347662 GJD4Q96KN9 370 aaPredicted RBP12.73□□□□□ -0.37
TRAF3-201ENST00000347662 KIFC3Q9BVG8 833 aa12.73□□□□□ -0.37
TRAF3-201ENST00000347662 ARHGEF5Q12774 1597 aa12.73□□□□□ -0.37
TRAF3-201ENST00000347662 TNKSO95271 1327 aa12.73□□□□□ -0.37
TRAF3-201ENST00000347662 PRR23D1E9PI22 279 aaPredicted RBP12.73□□□□□ -0.37
TRAF3-201ENST00000347662 APOA4P06727 396 aa12.73□□□□□ -0.37
TRAF3-201ENST00000347662 POLR2MP0CAP2 368 aa12.73□□□□□ -0.37
TRAF3-201ENST00000347662 PRR23D2P0DMB1 279 aaPredicted RBP12.73□□□□□ -0.37
TRAF3-201ENST00000347662 PPARGP37231 505 aaPredicted RBP12.73□□□□□ -0.37
TRAF3-201ENST00000347662 KCTD2Q14681 263 aa12.73□□□□□ -0.37
TRAF3-201ENST00000347662 KRT40Q6A162 431 aa12.73□□□□□ -0.37
TRAF3-201ENST00000347662 MED4Q9NPJ6 270 aa12.73□□□□□ -0.37
TRAF3-201ENST00000347662 MRPL11Q9Y3B7 192 aaKnown RBP12.73□□□□□ -0.37
TRAF3-201ENST00000347662 USP17L3A6NCW0 530 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 USP17L4A6NCW7 530 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 ADD1P35611 737 aaKnown RBP12.72□□□□□ -0.37
TRAF3-201ENST00000347662 DYNLT1P63172 113 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 HLFQ16534 295 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 LVRNQ6Q4G3 990 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 USP17L1Q7RTZ2 530 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 CCDC127Q96BQ5 260 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 ANKRD36BP1Q96IX9 119 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 RECQLP46063 649 aaPredicted RBP12.72□□□□□ -0.37
TRAF3-201ENST00000347662 SUSD4Q5VX71 490 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 FTOQ9C0B1 505 aaKnown RBP eCLIP12.72□□□□□ -0.37
TRAF3-201ENST00000347662 HPS4Q9NQG7 708 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 KCNG1Q9UIX4 513 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 FBXL5Q9UKA1 691 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 DPYSL4O14531 572 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 GNGT1P63211 74 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 GJC2Q5T442 439 aaPredicted RBP12.72□□□□□ -0.37
TRAF3-201ENST00000347662 PI16Q6UXB8 463 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 RRM2BQ7LG56 351 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 MAP7D3Q8IWC1 876 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 CERKQ8TCT0 537 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 CACTINQ8WUQ7 758 aaKnown RBP12.72□□□□□ -0.37
TRAF3-201ENST00000347662 ZBTB18Q99592 522 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 TTI1O43156 1089 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 NFKBIAP25963 317 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 TECP42680 631 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 NAA35Q5VZE5 725 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 PPP1R16BQ96T49 567 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 PIDD1Q9HB75 910 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 WARS2Q9UGM6 360 aaKnown RBP12.72□□□□□ -0.37
TRAF3-201ENST00000347662 SEPT9Q9UHD8 586 aaPredicted RBP12.72□□□□□ -0.37
TRAF3-201ENST00000347662 ERBB4Q15303 1308 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 NPC1L1Q9UHC9 1359 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 OAS2P29728 719 aaKnown RBP12.72□□□□□ -0.37
TRAF3-201ENST00000347662 PCDHA12Q9UN75 941 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 PRKCQQ04759 706 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 DCAF4L1Q3SXM0 396 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 RWDD4Q6NW29 188 aaKnown RBP12.72□□□□□ -0.37
TRAF3-201ENST00000347662 PCDHA1Q9Y5I3 950 aa12.72□□□□□ -0.37
TRAF3-201ENST00000347662 MBD5Q9P267 1494 aa12.71□□□□□ -0.37
TRAF3-201ENST00000347662 SNAP23O00161 211 aa12.71□□□□□ -0.37
TRAF3-201ENST00000347662 GSNP06396 782 aa12.71□□□□□ -0.37
TRAF3-201ENST00000347662 IMPDH2P12268 514 aa12.71□□□□□ -0.37
TRAF3-201ENST00000347662 TUBB2AQ13885 445 aa12.71□□□□□ -0.37
TRAF3-201ENST00000347662 GPBP1Q86WP2 473 aa12.71□□□□□ -0.37
TRAF3-201ENST00000347662 ARMC2Q8NEN0 867 aa12.71□□□□□ -0.37
TRAF3-201ENST00000347662 TUBB2BQ9BVA1 445 aa12.71□□□□□ -0.37
TRAF3-201ENST00000347662 RNF181Q9P0P0 153 aa12.71□□□□□ -0.37
TRAF3-201ENST00000347662 C6orf203Q9P0P8 240 aaPredicted RBP12.71□□□□□ -0.37
TRAF3-201ENST00000347662 IQANK1A0A1B0GTG1 560 aa12.71□□□□□ -0.37
TRAF3-201ENST00000347662 POLE2P56282 527 aa12.71□□□□□ -0.37
TRAF3-201ENST00000347662 LBRQ14739 615 aaKnown RBP12.71□□□□□ -0.37
TRAF3-201ENST00000347662 R3HDM1Q15032 1099 aaKnown RBP12.71□□□□□ -0.37
TRAF3-201ENST00000347662 MRFAP1L1Q96HT8 127 aa12.71□□□□□ -0.37
TRAF3-201ENST00000347662 TLR7Q9NYK1 1049 aaKnown RBP12.71□□□□□ -0.37
TRAF3-201ENST00000347662 AXIN2Q9Y2T1 843 aa12.71□□□□□ -0.37
TRAF3-201ENST00000347662 WDR91A4D1P6 747 aa12.71□□□□□ -0.37
TRAF3-201ENST00000347662 NPM3O75607 178 aaKnown RBP12.71□□□□□ -0.37
TRAF3-201ENST00000347662 MYL1P05976 194 aa12.71□□□□□ -0.37
TRAF3-201ENST00000347662 RPAINQ86UA6 219 aa12.71□□□□□ -0.37
TRAF3-201ENST00000347662 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.71□□□□□ -0.37
TRAF3-201ENST00000347662 SARS2Q9NP81 518 aaKnown RBP12.71□□□□□ -0.37
TRAF3-201ENST00000347662 HEG1Q9ULI3 1381 aa12.71□□□□□ -0.37
TRAF3-201ENST00000347662 IGSF1Q8N6C5 1336 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms