RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 POTEB3A0JP26 581 aa14.24□□□□□ -0.13
CLK3-201ENST00000345005 POTECB2RU33 542 aa14.24□□□□□ -0.13
CLK3-201ENST00000345005 PSMA7O14818 248 aa14.24□□□□□ -0.13
CLK3-201ENST00000345005 GAS7O60861 476 aa14.24□□□□□ -0.13
CLK3-201ENST00000345005 MED24O75448 989 aa14.24□□□□□ -0.13
CLK3-201ENST00000345005 TADA3O75528 432 aa14.24□□□□□ -0.13
CLK3-201ENST00000345005 PSMD10O75832 226 aa14.24□□□□□ -0.13
CLK3-201ENST00000345005 PPATQ06203 517 aa14.24□□□□□ -0.13
CLK3-201ENST00000345005 PSMD2Q13200 908 aa14.24□□□□□ -0.13
CLK3-201ENST00000345005 PPP2R5CQ13362 524 aa14.24□□□□□ -0.13
CLK3-201ENST00000345005 COBLL1Q53SF7 1204 aa14.24□□□□□ -0.13
CLK3-201ENST00000345005 SNRNP48Q6IEG0 339 aaKnown RBP14.24□□□□□ -0.13
CLK3-201ENST00000345005 TRIM65Q6PJ69 517 aa14.24□□□□□ -0.13
CLK3-201ENST00000345005 POTEBQ6S5H4 581 aa14.24□□□□□ -0.13
CLK3-201ENST00000345005 OTOP1Q7RTM1 612 aa14.24□□□□□ -0.13
CLK3-201ENST00000345005 PNMA8AQ86V59 439 aaPredicted RBP14.24□□□□□ -0.13
CLK3-201ENST00000345005 CATSPER3Q86XQ3 398 aa14.24□□□□□ -0.13
CLK3-201ENST00000345005 ERO1BQ86YB8 467 aa14.24□□□□□ -0.13
CLK3-201ENST00000345005 WNK4Q96J92 1243 aa14.24□□□□□ -0.13
CLK3-201ENST00000345005 WDR11Q9BZH6 1224 aa14.24□□□□□ -0.13
CLK3-201ENST00000345005 TAF1DQ9H5J8 278 aaPredicted RBP14.24□□□□□ -0.13
CLK3-201ENST00000345005 SAMSN1Q9NSI8 373 aaKnown RBP14.24□□□□□ -0.13
CLK3-201ENST00000345005 DNM3Q9UQ16 869 aa14.24□□□□□ -0.13
CLK3-201ENST00000345005 KIAA1217Q5T5P2 1943 aa14.23□□□□□ -0.13
CLK3-201ENST00000345005 TULP2O00295 520 aa14.23□□□□□ -0.13
CLK3-201ENST00000345005 TUBBP07437 444 aa14.23□□□□□ -0.13
CLK3-201ENST00000345005 TTLL12Q14166 644 aaPredicted RBP14.23□□□□□ -0.13
CLK3-201ENST00000345005 CDKAL1Q5VV42 579 aa14.23□□□□□ -0.13
CLK3-201ENST00000345005 RABGGTAQ92696 567 aa14.23□□□□□ -0.13
CLK3-201ENST00000345005 DDX12PQ92771 950 aa14.23□□□□□ -0.13
CLK3-201ENST00000345005 TAAR1Q96RJ0 339 aa14.23□□□□□ -0.13
CLK3-201ENST00000345005 CTAGE1Q96RT6 745 aa14.23□□□□□ -0.13
CLK3-201ENST00000345005 RIT2Q99578 217 aa14.23□□□□□ -0.13
CLK3-201ENST00000345005 ZNF577Q9BSK1 485 aa14.23□□□□□ -0.13
CLK3-201ENST00000345005 TEX13BQ9BXU2 312 aa14.23□□□□□ -0.13
CLK3-201ENST00000345005 ZNF214Q9UL59 606 aaPredicted RBP14.23□□□□□ -0.13
CLK3-201ENST00000345005 E9PMD0 336 aa14.22□□□□□ -0.13
CLK3-201ENST00000345005 CXCL11O14625 94 aa14.22□□□□□ -0.13
CLK3-201ENST00000345005 URI1O94763 535 aaPredicted RBP14.22□□□□□ -0.13
CLK3-201ENST00000345005 PLA2G4BP0C869 781 aa14.22□□□□□ -0.13
CLK3-201ENST00000345005 SPATA31C1P0DKV0 1188 aa14.22□□□□□ -0.13
CLK3-201ENST00000345005 TMEM132BQ14DG7 1078 aa14.22□□□□□ -0.13
CLK3-201ENST00000345005 EAPPQ56P03 285 aaPredicted RBP14.22□□□□□ -0.13
CLK3-201ENST00000345005 XRRA1Q6P2D8 792 aa14.22□□□□□ -0.13
CLK3-201ENST00000345005 NSMFQ6X4W1 530 aa14.22□□□□□ -0.13
CLK3-201ENST00000345005 DYMQ7RTS9 669 aa14.22□□□□□ -0.13
CLK3-201ENST00000345005 ARMC9Q7Z3E5 817 aa14.22□□□□□ -0.13
CLK3-201ENST00000345005 REXO1L1PQ8IX06 675 aa14.22□□□□□ -0.13
CLK3-201ENST00000345005 PROCA1Q8NCQ7 364 aaPredicted RBP14.22□□□□□ -0.13
CLK3-201ENST00000345005 RMDN3Q96TC7 470 aa14.22□□□□□ -0.13
CLK3-201ENST00000345005 EIF2AK1Q9BQI3 630 aaKnown RBP14.22□□□□□ -0.13
CLK3-201ENST00000345005 NAA15Q9BXJ9 866 aaKnown RBP14.22□□□□□ -0.13
CLK3-201ENST00000345005 TUFT1Q9NNX1 390 aa14.22□□□□□ -0.13
CLK3-201ENST00000345005 MAPK8IP1Q9UQF2 711 aa14.22□□□□□ -0.13
CLK3-201ENST00000345005 RIPK3Q9Y572 518 aa14.22□□□□□ -0.13
CLK3-201ENST00000345005 UBIAD1Q9Y5Z9 338 aa14.22□□□□□ -0.13
CLK3-201ENST00000345005 SPDYE16A6NNV3 312 aaPredicted RBP14.22□□□□□ -0.13
CLK3-201ENST00000345005 IPO5O00410 1097 aaKnown RBP14.22□□□□□ -0.13
CLK3-201ENST00000345005 SSBP05455 408 aaKnown RBP eCLIP14.22□□□□□ -0.13
CLK3-201ENST00000345005 ARP10275 920 aa14.22□□□□□ -0.13
CLK3-201ENST00000345005 MUTP22033 750 aa14.22□□□□□ -0.13
CLK3-201ENST00000345005 SPAG1Q07617 926 aa14.22□□□□□ -0.13
CLK3-201ENST00000345005 HSP90AA4PQ58FG1 418 aa14.22□□□□□ -0.13
CLK3-201ENST00000345005 MSL3Q8N5Y2 521 aaKnown RBP14.22□□□□□ -0.13
CLK3-201ENST00000345005 BAG1Q99933 345 aaPredicted RBP14.22□□□□□ -0.13
CLK3-201ENST00000345005 TEKT3Q9BXF9 490 aa14.22□□□□□ -0.13
CLK3-201ENST00000345005 ELP3Q9H9T3 547 aa14.22□□□□□ -0.13
CLK3-201ENST00000345005 PPP2R2CQ9Y2T4 447 aa14.22□□□□□ -0.13
CLK3-201ENST00000345005 A0A0G2JMZ2 1700 aa14.21□□□□□ -0.13
CLK3-201ENST00000345005 BICDL2A1A5D9 508 aa14.21□□□□□ -0.13
CLK3-201ENST00000345005 POTEFA5A3E0 1075 aa14.21□□□□□ -0.13
CLK3-201ENST00000345005 SPDYE5A6NIY4 337 aa14.21□□□□□ -0.13
CLK3-201ENST00000345005 EML1O00423 815 aa14.21□□□□□ -0.13
CLK3-201ENST00000345005 POTEIP0CG38 1075 aa14.21□□□□□ -0.13
CLK3-201ENST00000345005 IDEP14735 1019 aa14.21□□□□□ -0.13
CLK3-201ENST00000345005 ITGB5P18084 799 aa14.21□□□□□ -0.13
CLK3-201ENST00000345005 STK4Q13043 487 aa14.21□□□□□ -0.13
CLK3-201ENST00000345005 TBX2Q13207 712 aaPredicted RBP14.21□□□□□ -0.13
CLK3-201ENST00000345005 BAATQ14032 418 aaPredicted RBP14.21□□□□□ -0.13
CLK3-201ENST00000345005 PGM5Q15124 567 aa14.21□□□□□ -0.13
CLK3-201ENST00000345005 FILIP1LQ4L180 1135 aa14.21□□□□□ -0.13
CLK3-201ENST00000345005 ARHGEF16Q5VV41 709 aa14.21□□□□□ -0.13
CLK3-201ENST00000345005 POTEGQ6S5H5 508 aa14.21□□□□□ -0.13
CLK3-201ENST00000345005 POTEEQ6S8J3 1075 aa14.21□□□□□ -0.13
CLK3-201ENST00000345005 SLC30A10Q6XR72 485 aa14.21□□□□□ -0.13
CLK3-201ENST00000345005 GPBP1Q86WP2 473 aa14.21□□□□□ -0.13
CLK3-201ENST00000345005 MB21D1Q8N884 522 aa14.21□□□□□ -0.13
CLK3-201ENST00000345005 ANKRD20A12PQ8NF67 263 aa14.21□□□□□ -0.13
CLK3-201ENST00000345005 DNAJC19Q96DA6 116 aa14.21□□□□□ -0.13
CLK3-201ENST00000345005 HSD17B14Q9BPX1 270 aa14.21□□□□□ -0.13
CLK3-201ENST00000345005 ACAD9Q9H845 621 aa14.21□□□□□ -0.13
CLK3-201ENST00000345005 ARFGAP3Q9NP61 516 aa14.21□□□□□ -0.13
CLK3-201ENST00000345005 JADE2Q9NQC1 790 aa14.21□□□□□ -0.13
CLK3-201ENST00000345005 PXMP2Q9NR77 195 aa14.21□□□□□ -0.13
CLK3-201ENST00000345005 WDR81Q562E7 1941 aa14.21□□□□□ -0.14
CLK3-201ENST00000345005 A0A0G2JLL6 359 aaPredicted RBP14.2□□□□□ -0.14
CLK3-201ENST00000345005 EIF2AK2P19525 551 aaKnown RBP14.2□□□□□ -0.14
CLK3-201ENST00000345005 CCNE1P24864 410 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 SLC12A3P55017 1021 aa14.2□□□□□ -0.14
CLK3-201ENST00000345005 MRPS9P82933 396 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms