RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 KRT76Q01546 638 aa23.53■■□□□ 1.36
SMARCB1-202ENST00000344921 MFSD10Q14728 455 aa23.53■■□□□ 1.36
SMARCB1-202ENST00000344921 SNX17Q15036 470 aa23.53■■□□□ 1.36
SMARCB1-202ENST00000344921 KIAA0753Q2KHM9 967 aa23.53■■□□□ 1.36
SMARCB1-202ENST00000344921 ETNPPLQ8TBG4 499 aa23.53■■□□□ 1.36
SMARCB1-202ENST00000344921 KAT2BQ92831 832 aa23.53■■□□□ 1.36
SMARCB1-202ENST00000344921 GLG1Q92896 1179 aa23.53■■□□□ 1.36
SMARCB1-202ENST00000344921 C16orf70Q9BSU1 422 aa23.53■■□□□ 1.36
SMARCB1-202ENST00000344921 TUT1Q9H6E5 874 aaKnown RBP23.53■■□□□ 1.36
SMARCB1-202ENST00000344921 ZNF215Q9UL58 517 aaPredicted RBP23.53■■□□□ 1.36
SMARCB1-202ENST00000344921 GRIN2DO15399 1336 aa23.52■■□□□ 1.36
SMARCB1-202ENST00000344921 CHMP2AO43633 222 aa23.52■■□□□ 1.36
SMARCB1-202ENST00000344921 NEMFO60524 1076 aa23.52■■□□□ 1.36
SMARCB1-202ENST00000344921 F2P00734 622 aa23.52■■□□□ 1.36
SMARCB1-202ENST00000344921 PSEN2P49810 448 aa23.52■■□□□ 1.36
SMARCB1-202ENST00000344921 TRIM50Q86XT4 487 aa23.52■■□□□ 1.36
SMARCB1-202ENST00000344921 FAM20AQ96MK3 541 aa23.52■■□□□ 1.36
SMARCB1-202ENST00000344921 AZI2Q9H6S1 392 aa23.52■■□□□ 1.36
SMARCB1-202ENST00000344921 DCDC2CA8MYV0 355 aa23.51■■□□□ 1.35
SMARCB1-202ENST00000344921 WNT7AO00755 349 aa23.51■■□□□ 1.35
SMARCB1-202ENST00000344921 CCNE2O96020 404 aa23.51■■□□□ 1.35
SMARCB1-202ENST00000344921 TRAPPC10P48553 1259 aa23.51■■□□□ 1.35
SMARCB1-202ENST00000344921 TLE2Q04725 743 aa23.51■■□□□ 1.35
SMARCB1-202ENST00000344921 ZNF174Q15697 407 aa23.51■■□□□ 1.35
SMARCB1-202ENST00000344921 CALCRLQ16602 461 aa23.51■■□□□ 1.35
SMARCB1-202ENST00000344921 TTC38Q5R3I4 469 aa23.51■■□□□ 1.35
SMARCB1-202ENST00000344921 ZNF746Q6NUN9 644 aaPredicted RBP23.51■■□□□ 1.35
SMARCB1-202ENST00000344921 SEZ6LQ9BYH1 1024 aa23.51■■□□□ 1.35
SMARCB1-202ENST00000344921 KCNMB3Q9NPA1 279 aa23.51■■□□□ 1.35
SMARCB1-202ENST00000344921 NR2E3Q9Y5X4 410 aa23.51■■□□□ 1.35
SMARCB1-202ENST00000344921 ALPK3Q96L96 1907 aa23.51■■□□□ 1.35
SMARCB1-202ENST00000344921 BACH1O14867 736 aa23.5■■□□□ 1.35
SMARCB1-202ENST00000344921 TBX3O15119 743 aa23.5■■□□□ 1.35
SMARCB1-202ENST00000344921 PSMD10O75832 226 aa23.5■■□□□ 1.35
SMARCB1-202ENST00000344921 MIS18BP1Q6P0N0 1132 aa23.5■■□□□ 1.35
SMARCB1-202ENST00000344921 FERMT3Q86UX7 667 aa23.5■■□□□ 1.35
SMARCB1-202ENST00000344921 SMAP1Q8IYB5 467 aaPredicted RBP23.5■■□□□ 1.35
SMARCB1-202ENST00000344921 C7orf31Q8N865 590 aa23.5■■□□□ 1.35
SMARCB1-202ENST00000344921 SMARCAD1Q9H4L7 1026 aa23.5■■□□□ 1.35
SMARCB1-202ENST00000344921 SCN10AQ9Y5Y9 1956 aa23.5■■□□□ 1.35
SMARCB1-202ENST00000344921 TNRC18O15417 2968 aaPredicted RBP23.5■■□□□ 1.35
SMARCB1-202ENST00000344921 CDK7P50613 346 aa23.5■■□□□ 1.35
SMARCB1-202ENST00000344921 NFRKBQ6P4R8 1299 aa23.5■■□□□ 1.35
SMARCB1-202ENST00000344921 SLFN12Q8IYM2 578 aa23.5■■□□□ 1.35
SMARCB1-202ENST00000344921 SLC43A3Q8NBI5 491 aa23.5■■□□□ 1.35
SMARCB1-202ENST00000344921 TLR3O15455 904 aaKnown RBP23.49■■□□□ 1.35
SMARCB1-202ENST00000344921 STX6O43752 255 aa23.49■■□□□ 1.35
SMARCB1-202ENST00000344921 ATG7O95352 703 aa23.49■■□□□ 1.35
SMARCB1-202ENST00000344921 NBR1Q14596 966 aa23.49■■□□□ 1.35
SMARCB1-202ENST00000344921 ANKRD33Q7Z3H0 272 aa23.49■■□□□ 1.35
SMARCB1-202ENST00000344921 UNC45AQ9H3U1 944 aa23.49■■□□□ 1.35
SMARCB1-202ENST00000344921 PCDHA10Q9Y5I2 948 aa23.49■■□□□ 1.35
SMARCB1-202ENST00000344921 WDR64B1ANS9 1081 aa23.48■■□□□ 1.35
SMARCB1-202ENST00000344921 PSAPP07602 524 aa23.48■■□□□ 1.35
SMARCB1-202ENST00000344921 SUPT20HL2P0C7V6 817 aa23.48■■□□□ 1.35
SMARCB1-202ENST00000344921 MARK3P27448 753 aa23.48■■□□□ 1.35
SMARCB1-202ENST00000344921 STAT5BP51692 787 aa23.48■■□□□ 1.35
SMARCB1-202ENST00000344921 RILPL1Q5EBL4 403 aa23.48■■□□□ 1.35
SMARCB1-202ENST00000344921 FAM160B1Q5W0V3 765 aa23.48■■□□□ 1.35
SMARCB1-202ENST00000344921 ABHD15Q6UXT9 468 aa23.48■■□□□ 1.35
SMARCB1-202ENST00000344921 MIER3Q7Z3K6 550 aa23.48■■□□□ 1.35
SMARCB1-202ENST00000344921 HAS1Q92839 578 aa23.48■■□□□ 1.35
SMARCB1-202ENST00000344921 TOX2Q96NM4 488 aa23.48■■□□□ 1.35
SMARCB1-202ENST00000344921 PRDM5Q9NQX1 630 aaPredicted RBP23.48■■□□□ 1.35
SMARCB1-202ENST00000344921 DISC1Q9NRI5 854 aa23.48■■□□□ 1.35
SMARCB1-202ENST00000344921 ERAP1Q9NZ08 941 aa23.48■■□□□ 1.35
SMARCB1-202ENST00000344921 PRKAG2Q9UGJ0 569 aa23.48■■□□□ 1.35
SMARCB1-202ENST00000344921 EMSYQ7Z589 1322 aa23.48■■□□□ 1.35
SMARCB1-202ENST00000344921 HAS3O00219 553 aa23.47■■□□□ 1.35
SMARCB1-202ENST00000344921 SFNP31947 248 aa23.47■■□□□ 1.35
SMARCB1-202ENST00000344921 SWSAP1Q6NVH7 229 aa23.47■■□□□ 1.35
SMARCB1-202ENST00000344921 BRAPQ7Z569 592 aa23.47■■□□□ 1.35
SMARCB1-202ENST00000344921 ZNF302Q9NR11 478 aa23.47■■□□□ 1.35
SMARCB1-202ENST00000344921 HDAC6Q9UBN7 1215 aa23.47■■□□□ 1.35
SMARCB1-202ENST00000344921 LGR5O75473 907 aa23.47■■□□□ 1.35
SMARCB1-202ENST00000344921 TXKP42681 527 aa23.47■■□□□ 1.35
SMARCB1-202ENST00000344921 TOB1P50616 345 aaPredicted RBP23.47■■□□□ 1.35
SMARCB1-202ENST00000344921 JAK3P52333 1124 aa23.47■■□□□ 1.35
SMARCB1-202ENST00000344921 ORC2Q13416 577 aaPredicted RBP23.47■■□□□ 1.35
SMARCB1-202ENST00000344921 FAM126BQ8IXS8 530 aa23.47■■□□□ 1.35
SMARCB1-202ENST00000344921 PCYT2Q99447 389 aa23.47■■□□□ 1.35
SMARCB1-202ENST00000344921 PCDHA12Q9UN75 941 aa23.47■■□□□ 1.35
SMARCB1-202ENST00000344921 NOD1Q9Y239 953 aa23.47■■□□□ 1.35
SMARCB1-202ENST00000344921 PCDHB6Q9Y5E3 794 aa23.47■■□□□ 1.35
SMARCB1-202ENST00000344921 CLTBP09497 229 aa23.46■■□□□ 1.35
SMARCB1-202ENST00000344921 PTPN11Q06124 597 aaPredicted RBP23.46■■□□□ 1.35
SMARCB1-202ENST00000344921 TRPV6Q9H1D0 765 aa23.46■■□□□ 1.35
SMARCB1-202ENST00000344921 TRMT13Q9NUP7 481 aaKnown RBP23.46■■□□□ 1.35
SMARCB1-202ENST00000344921 TMEM39AQ9NV64 488 aa23.46■■□□□ 1.35
SMARCB1-202ENST00000344921 B4GALT4O60513 344 aa23.45■■□□□ 1.34
SMARCB1-202ENST00000344921 SYN1P17600 705 aa23.45■■□□□ 1.34
SMARCB1-202ENST00000344921 FAAP100Q0VG06 881 aa23.45■■□□□ 1.34
SMARCB1-202ENST00000344921 PDXDC2PQ6P474 469 aa23.45■■□□□ 1.34
SMARCB1-202ENST00000344921 PLPPR4Q7Z2D5 763 aa23.45■■□□□ 1.34
SMARCB1-202ENST00000344921 CCDC60Q8IWA6 550 aaPredicted RBP23.45■■□□□ 1.34
SMARCB1-202ENST00000344921 TMEM60Q9H2L4 133 aa23.45■■□□□ 1.34
SMARCB1-202ENST00000344921 RNPEPQ9H4A4 650 aa23.45■■□□□ 1.34
SMARCB1-202ENST00000344921 TTC12Q9H892 705 aaPredicted RBP23.45■■□□□ 1.34
SMARCB1-202ENST00000344921 ZMYND8Q9ULU4 1186 aaPredicted RBP23.45■■□□□ 1.34
SMARCB1-202ENST00000344921 MTMR6Q9Y217 621 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms