RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 XPO6Q96QU8 1125 aaKnown RBP14.67□□□□□ -0.06
TRIO-202ENST00000344204 UNC45AQ9H3U1 944 aa14.67□□□□□ -0.06
TRIO-202ENST00000344204 SUCLA2Q9P2R7 463 aaPredicted RBP14.67□□□□□ -0.06
TRIO-202ENST00000344204 LZTS2Q9BRK4 669 aa14.67□□□□□ -0.06
TRIO-202ENST00000344204 TUBA8Q9NY65 449 aaPredicted RBP14.67□□□□□ -0.06
TRIO-202ENST00000344204 KDM3AQ9Y4C1 1321 aa14.67□□□□□ -0.06
TRIO-202ENST00000344204 SYF2O95926 243 aaKnown RBP14.67□□□□□ -0.06
TRIO-202ENST00000344204 RASGRP2Q7LDG7 609 aa14.67□□□□□ -0.06
TRIO-202ENST00000344204 SPATA4Q8NEY3 305 aa14.67□□□□□ -0.06
TRIO-202ENST00000344204 APPBP2Q92624 585 aa14.67□□□□□ -0.06
TRIO-202ENST00000344204 RNPC3Q96LT9 517 aaKnown RBP14.67□□□□□ -0.06
TRIO-202ENST00000344204 ASCC2Q9H1I8 757 aaPredicted RBP14.67□□□□□ -0.06
TRIO-202ENST00000344204 TRPC5Q9UL62 973 aaPredicted RBP14.67□□□□□ -0.06
TRIO-202ENST00000344204 FAM186BQ8IYM0 893 aa14.66□□□□□ -0.06
TRIO-202ENST00000344204 NAF1Q96HR8 494 aaKnown RBP14.66□□□□□ -0.06
TRIO-202ENST00000344204 OLFML3Q9NRN5 406 aa14.66□□□□□ -0.06
TRIO-202ENST00000344204 E2F6O75461 281 aa14.66□□□□□ -0.06
TRIO-202ENST00000344204 RPS6KA5O75582 802 aa14.66□□□□□ -0.06
TRIO-202ENST00000344204 PDIA3P30101 505 aaKnown RBP14.66□□□□□ -0.06
TRIO-202ENST00000344204 TRMT112Q9UI30 125 aaKnown RBP14.66□□□□□ -0.06
TRIO-202ENST00000344204 DCTN4Q9UJW0 460 aa14.66□□□□□ -0.06
TRIO-202ENST00000344204 WASLO00401 505 aaPredicted RBP14.66□□□□□ -0.06
TRIO-202ENST00000344204 SH3BP5O60239 455 aa14.66□□□□□ -0.06
TRIO-202ENST00000344204 CAPN11Q9UMQ6 739 aa14.66□□□□□ -0.06
TRIO-202ENST00000344204 MYO9BQ13459 2157 aa14.66□□□□□ -0.06
TRIO-202ENST00000344204 TRPV6Q9H1D0 765 aa14.66□□□□□ -0.06
TRIO-202ENST00000344204 ANKIB1Q9P2G1 1089 aa14.66□□□□□ -0.06
TRIO-202ENST00000344204 ATP11BQ9Y2G3 1177 aa14.66□□□□□ -0.06
TRIO-202ENST00000344204 E9PMD0 336 aa14.66□□□□□ -0.06
TRIO-202ENST00000344204 GCNT3O95395 438 aa14.66□□□□□ -0.06
TRIO-202ENST00000344204 MYL1P05976 194 aa14.66□□□□□ -0.06
TRIO-202ENST00000344204 MLH1P40692 756 aa14.66□□□□□ -0.06
TRIO-202ENST00000344204 PMS2P54278 862 aa14.66□□□□□ -0.06
TRIO-202ENST00000344204 CAV1Q03135 178 aa14.66□□□□□ -0.06
TRIO-202ENST00000344204 CC2D2BQ6DHV5 1058 aa14.66□□□□□ -0.06
TRIO-202ENST00000344204 TRIM74Q86UV6 250 aa14.66□□□□□ -0.06
TRIO-202ENST00000344204 TRIM73Q86UV7 250 aa14.66□□□□□ -0.06
TRIO-202ENST00000344204 ZCRB1Q8TBF4 217 aaKnown RBP14.66□□□□□ -0.06
TRIO-202ENST00000344204 KNL1Q8NG31 2342 aa14.66□□□□□ -0.06
TRIO-202ENST00000344204 EVPLQ92817 2033 aa14.66□□□□□ -0.06
TRIO-202ENST00000344204 PALM3A6NDB9 673 aaPredicted RBP14.66□□□□□ -0.06
TRIO-202ENST00000344204 KIRREL3Q8IZU9 778 aa14.66□□□□□ -0.06
TRIO-202ENST00000344204 ACTN1P12814 892 aa14.66□□□□□ -0.06
TRIO-202ENST00000344204 NCF2P19878 526 aaPredicted RBP14.66□□□□□ -0.06
TRIO-202ENST00000344204 PDE1BQ01064 536 aa14.66□□□□□ -0.06
TRIO-202ENST00000344204 C14orf93Q9H972 538 aaKnown RBP14.66□□□□□ -0.06
TRIO-202ENST00000344204 ATP5JP18859 108 aa14.65□□□□□ -0.06
TRIO-202ENST00000344204 FOXP1Q9H334 677 aaPredicted RBP14.65□□□□□ -0.06
TRIO-202ENST00000344204 TMA7Q9Y2S6 64 aaKnown RBP14.65□□□□□ -0.06
TRIO-202ENST00000344204 NANOGNBQ7Z5D8 188 aa14.65□□□□□ -0.06
TRIO-202ENST00000344204 CFAP69A5D8W1 941 aa14.65□□□□□ -0.06
TRIO-202ENST00000344204 ATP6V1G2O95670 118 aa14.65□□□□□ -0.06
TRIO-202ENST00000344204 TRIM60Q495X7 471 aa14.65□□□□□ -0.06
TRIO-202ENST00000344204 FMR1NBQ8N0W7 255 aaPredicted RBP14.65□□□□□ -0.06
TRIO-202ENST00000344204 TRIP11Q15643 1979 aa14.65□□□□□ -0.06
TRIO-202ENST00000344204 MED23Q9ULK4 1368 aa14.65□□□□□ -0.06
TRIO-202ENST00000344204 FOXR1Q6PIV2 292 aa14.65□□□□□ -0.06
TRIO-202ENST00000344204 MAP4K1Q92918 833 aa14.65□□□□□ -0.06
TRIO-202ENST00000344204 ZNF652Q9Y2D9 606 aa14.65□□□□□ -0.06
TRIO-202ENST00000344204 DIS3Q9Y2L1 958 aaKnown RBP14.65□□□□□ -0.06
TRIO-202ENST00000344204 DTX3LQ8TDB6 740 aa14.65□□□□□ -0.06
TRIO-202ENST00000344204 RIN2Q8WYP3 895 aaPredicted RBP14.65□□□□□ -0.06
TRIO-202ENST00000344204 SLITRK6Q9H5Y7 841 aa14.65□□□□□ -0.06
TRIO-202ENST00000344204 SUGCTQ9HAC7 445 aa14.65□□□□□ -0.06
TRIO-202ENST00000344204 MLXIPQ9HAP2 919 aa14.65□□□□□ -0.06
TRIO-202ENST00000344204 KRT4P19013 534 aa14.65□□□□□ -0.06
TRIO-202ENST00000344204 EIF2B2P49770 351 aaKnown RBP14.65□□□□□ -0.06
TRIO-202ENST00000344204 ARHGAP44Q17R89 818 aa14.65□□□□□ -0.06
TRIO-202ENST00000344204 EXOC3L4Q17RC7 722 aa14.65□□□□□ -0.06
TRIO-202ENST00000344204 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.65□□□□□ -0.067e-7■■□□□ 14.2
TRIO-202ENST00000344204 SYCE1LA8MT33 242 aa14.65□□□□□ -0.06
TRIO-202ENST00000344204 FSCBQ5H9T9 825 aa14.65□□□□□ -0.06
TRIO-202ENST00000344204 KCNH5Q8NCM2 988 aa14.65□□□□□ -0.06
TRIO-202ENST00000344204 CCT7Q99832 543 aa14.65□□□□□ -0.06
TRIO-202ENST00000344204 MRPL40Q9NQ50 206 aaKnown RBP14.65□□□□□ -0.06
TRIO-202ENST00000344204 CFLARO15519 480 aa14.65□□□□□ -0.06
TRIO-202ENST00000344204 RCN1Q15293 331 aa14.65□□□□□ -0.06
TRIO-202ENST00000344204 BYSLQ13895 437 aaKnown RBP14.65□□□□□ -0.06
TRIO-202ENST00000344204 ZCWPW2Q504Y3 356 aa14.65□□□□□ -0.06
TRIO-202ENST00000344204 DDHD1Q8NEL9 900 aa14.65□□□□□ -0.06
TRIO-202ENST00000344204 BTBD7Q9P203 1132 aa14.65□□□□□ -0.06
TRIO-202ENST00000344204 PODXLO00592 558 aa14.64□□□□□ -0.07
TRIO-202ENST00000344204 TSPY1Q01534 308 aa14.64□□□□□ -0.07
TRIO-202ENST00000344204 POLR3CQ9BUI4 534 aaPredicted RBP14.64□□□□□ -0.07
TRIO-202ENST00000344204 CORO1CQ9ULV4 474 aaPredicted RBP14.64□□□□□ -0.07
TRIO-202ENST00000344204 MRPL28Q13084 256 aaKnown RBP14.64□□□□□ -0.07
TRIO-202ENST00000344204 TMEM259Q4ZIN3 620 aa14.64□□□□□ -0.07
TRIO-202ENST00000344204 MBD4O95243 580 aa14.64□□□□□ -0.07
TRIO-202ENST00000344204 BFSP1Q12934 665 aa14.64□□□□□ -0.07
TRIO-202ENST00000344204 TEDDM1Q5T9Z0 273 aa14.64□□□□□ -0.07
TRIO-202ENST00000344204 NOA1Q8NC60 698 aaKnown RBP14.64□□□□□ -0.07
TRIO-202ENST00000344204 P2RX5Q93086 422 aa14.64□□□□□ -0.07
TRIO-202ENST00000344204 TTC25Q96NG3 672 aa14.64□□□□□ -0.07
TRIO-202ENST00000344204 KLHL25Q9H0H3 589 aa14.64□□□□□ -0.07
TRIO-202ENST00000344204 BACH1O14867 736 aa14.64□□□□□ -0.07
TRIO-202ENST00000344204 SLC12A2P55011 1212 aa14.64□□□□□ -0.07
TRIO-202ENST00000344204 GRIN2AQ12879 1464 aa14.64□□□□□ -0.07
TRIO-202ENST00000344204 TTI1O43156 1089 aa14.64□□□□□ -0.07
TRIO-202ENST00000344204 GARSP41250 739 aaKnown RBP14.64□□□□□ -0.07
TRIO-202ENST00000344204 TBL3Q12788 808 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms