RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 GDAP1Q8TB36 358 aa11.84□□□□□ -0.51
RPL28-201ENST00000344063 BARHL2Q9NY43 387 aa11.84□□□□□ -0.51
RPL28-201ENST00000344063 FAM205CA6NFA0 338 aa11.84□□□□□ -0.51
RPL28-201ENST00000344063 ENO4A6NNW6 628 aa11.84□□□□□ -0.51
RPL28-201ENST00000344063 NMT2O60551 498 aa11.84□□□□□ -0.51
RPL28-201ENST00000344063 HDLBPQ00341 1268 aaKnown RBP11.84□□□□□ -0.51
RPL28-201ENST00000344063 CCNI2Q6ZMN8 369 aaPredicted RBP11.84□□□□□ -0.51
RPL28-201ENST00000344063 MS4A14Q96JA4 679 aa11.84□□□□□ -0.51
RPL28-201ENST00000344063 TRIM4Q9C037 500 aa11.84□□□□□ -0.51
RPL28-201ENST00000344063 SENP2Q9HC62 589 aa11.84□□□□□ -0.51
RPL28-201ENST00000344063 DNAJC17Q9NVM6 304 aaKnown RBP11.84□□□□□ -0.51
RPL28-201ENST00000344063 USH1CQ9Y6N9 552 aa11.84□□□□□ -0.51
RPL28-201ENST00000344063 GMNCA6NCL1 334 aa11.84□□□□□ -0.51
RPL28-201ENST00000344063 PALMO75781 387 aa11.84□□□□□ -0.51
RPL28-201ENST00000344063 ZRANB2O95218 330 aaKnown RBP eCLIP11.84□□□□□ -0.51
RPL28-201ENST00000344063 PSMC2P35998 433 aaKnown RBP11.84□□□□□ -0.51
RPL28-201ENST00000344063 TXNRD1Q16881 649 aa11.84□□□□□ -0.51
RPL28-201ENST00000344063 FYB2Q5VWT5 728 aa11.84□□□□□ -0.51
RPL28-201ENST00000344063 TMC4Q7Z404 712 aa11.84□□□□□ -0.51
RPL28-201ENST00000344063 GUF1Q8N442 669 aaKnown RBP11.84□□□□□ -0.51
RPL28-201ENST00000344063 SRBD1Q8N5C6 995 aaKnown RBP11.84□□□□□ -0.51
RPL28-201ENST00000344063 CCT8L2Q96SF2 557 aa11.84□□□□□ -0.51
RPL28-201ENST00000344063 PNMA6FA0A0J9YX94 578 aa11.83□□□□□ -0.51
RPL28-201ENST00000344063 TARSL2A2RTX5 802 aaKnown RBP11.83□□□□□ -0.51
RPL28-201ENST00000344063 BBOX1O75936 387 aa11.83□□□□□ -0.51
RPL28-201ENST00000344063 GFPT1Q06210 699 aaPredicted RBP11.83□□□□□ -0.51
RPL28-201ENST00000344063 GNPTABQ3T906 1256 aa11.83□□□□□ -0.51
RPL28-201ENST00000344063 MIER3Q7Z3K6 550 aa11.83□□□□□ -0.51
RPL28-201ENST00000344063 FAM186BQ8IYM0 893 aa11.83□□□□□ -0.51
RPL28-201ENST00000344063 EDEM3Q9BZQ6 932 aa11.83□□□□□ -0.51
RPL28-201ENST00000344063 EHD2Q9NZN4 543 aa11.83□□□□□ -0.51
RPL28-201ENST00000344063 CEP72Q9P209 647 aa11.83□□□□□ -0.51
RPL28-201ENST00000344063 TBK1Q9UHD2 729 aa11.83□□□□□ -0.51
RPL28-201ENST00000344063 MRPL11Q9Y3B7 192 aaKnown RBP11.83□□□□□ -0.51
RPL28-201ENST00000344063 PPP1R37O75864 691 aa11.83□□□□□ -0.52
RPL28-201ENST00000344063 BAG2O95816 211 aa11.83□□□□□ -0.52
RPL28-201ENST00000344063 POLR2MP0CAP2 368 aa11.83□□□□□ -0.52
RPL28-201ENST00000344063 APBB1IPQ7Z5R6 666 aaPredicted RBP11.83□□□□□ -0.52
RPL28-201ENST00000344063 ZNF473Q8WTR7 871 aaKnown RBP11.83□□□□□ -0.52
RPL28-201ENST00000344063 EHD4Q9H223 541 aa11.83□□□□□ -0.52
RPL28-201ENST00000344063 KCNG1Q9UIX4 513 aa11.83□□□□□ -0.52
RPL28-201ENST00000344063 THRAP3Q9Y2W1 955 aaKnown RBP11.83□□□□□ -0.52
RPL28-201ENST00000344063 NDC80O14777 642 aa11.83□□□□□ -0.52
RPL28-201ENST00000344063 GYPCP04921 128 aa11.83□□□□□ -0.52
RPL28-201ENST00000344063 ADSSL1Q8N142 457 aa11.83□□□□□ -0.52
RPL28-201ENST00000344063 RUNDC3BQ96NL0 473 aa11.83□□□□□ -0.52
RPL28-201ENST00000344063 ANKZF1Q9H8Y5 726 aa11.83□□□□□ -0.52
RPL28-201ENST00000344063 DAAM1Q9Y4D1 1078 aa11.83□□□□□ -0.52
RPL28-201ENST00000344063 CCDC188H7C350 402 aa11.83□□□□□ -0.52
RPL28-201ENST00000344063 PDHA1P08559 390 aa11.83□□□□□ -0.52
RPL28-201ENST00000344063 GRAPQ13588 217 aa11.83□□□□□ -0.52
RPL28-201ENST00000344063 COL9A3Q14050 684 aaPredicted RBP11.83□□□□□ -0.52
RPL28-201ENST00000344063 NCAPHQ15003 741 aa11.83□□□□□ -0.52
RPL28-201ENST00000344063 ZYXQ15942 572 aaKnown RBP11.83□□□□□ -0.52
RPL28-201ENST00000344063 CCDC13Q8IYE1 715 aa11.83□□□□□ -0.52
RPL28-201ENST00000344063 ZNF34Q8IZ26 560 aa11.83□□□□□ -0.52
RPL28-201ENST00000344063 PAF1Q8N7H5 531 aa11.83□□□□□ -0.52
RPL28-201ENST00000344063 OR2W6PQ8NHA6 318 aa11.83□□□□□ -0.52
RPL28-201ENST00000344063 GRAPLQ8TC17 118 aaPredicted RBP11.83□□□□□ -0.52
RPL28-201ENST00000344063 KANSL2Q9H9L4 492 aa11.83□□□□□ -0.52
RPL28-201ENST00000344063 MMEP08473 750 aa11.82□□□□□ -0.52
RPL28-201ENST00000344063 HSPA6P17066 643 aa11.82□□□□□ -0.52
RPL28-201ENST00000344063 SCNN1DP51172 638 aa11.82□□□□□ -0.52
RPL28-201ENST00000344063 STRN3Q13033 797 aa11.82□□□□□ -0.52
RPL28-201ENST00000344063 SH3RF3Q8TEJ3 882 aaPredicted RBP11.82□□□□□ -0.52
RPL28-201ENST00000344063 SAAL1Q96ER3 474 aa11.82□□□□□ -0.52
RPL28-201ENST00000344063 USTQ9Y2C2 406 aa11.82□□□□□ -0.52
RPL28-201ENST00000344063 UBE2Q2LH0YL09 131 aa11.82□□□□□ -0.52
RPL28-201ENST00000344063 K7ENM7 598 aa11.82□□□□□ -0.52
RPL28-201ENST00000344063 CIB2O75838 187 aa11.82□□□□□ -0.52
RPL28-201ENST00000344063 SP4Q02446 784 aa11.82□□□□□ -0.52
RPL28-201ENST00000344063 CUL1Q13616 776 aa11.82□□□□□ -0.52
RPL28-201ENST00000344063 ODR4Q5SWX8 454 aa11.82□□□□□ -0.52
RPL28-201ENST00000344063 ALKBH5Q6P6C2 394 aaKnown RBP11.82□□□□□ -0.52
RPL28-201ENST00000344063 ZNF449Q6P9G9 518 aa11.82□□□□□ -0.52
RPL28-201ENST00000344063 ARMC9Q7Z3E5 817 aa11.82□□□□□ -0.52
RPL28-201ENST00000344063 FAM84BQ96KN1 310 aaPredicted RBP11.82□□□□□ -0.52
RPL28-201ENST00000344063 TEKT3Q9BXF9 490 aa11.82□□□□□ -0.52
RPL28-201ENST00000344063 DDX47Q9H0S4 455 aaKnown RBP11.82□□□□□ -0.52
RPL28-201ENST00000344063 LRRC53A6NM62 1247 aa11.82□□□□□ -0.52
RPL28-201ENST00000344063 PP2D1A8MPX8 630 aa11.82□□□□□ -0.52
RPL28-201ENST00000344063 NUGGCQ68CJ6 796 aa11.82□□□□□ -0.52
RPL28-201ENST00000344063 RSRC2Q7L4I2 434 aaKnown RBP11.82□□□□□ -0.52
RPL28-201ENST00000344063 GRK7Q8WTQ7 553 aa11.82□□□□□ -0.52
RPL28-201ENST00000344063 HNRNPLLQ8WVV9 542 aaKnown RBP11.82□□□□□ -0.52
RPL28-201ENST00000344063 CELF1Q92879 486 aaKnown RBP11.82□□□□□ -0.52
RPL28-201ENST00000344063 GEMIN8Q9NWZ8 242 aaKnown RBP11.82□□□□□ -0.52
RPL28-201ENST00000344063 NOP53Q9NZM5 478 aaKnown RBP11.82□□□□□ -0.52
RPL28-201ENST00000344063 ANKRD20A3Q5VUR7 823 aa11.82□□□□□ -0.52
RPL28-201ENST00000344063 TAB3Q8N5C8 712 aaPredicted RBP11.82□□□□□ -0.52
RPL28-201ENST00000344063 RAB3IPQ96QF0 476 aaPredicted RBP11.82□□□□□ -0.52
RPL28-201ENST00000344063 MAP3K14Q99558 947 aa11.82□□□□□ -0.52
RPL28-201ENST00000344063 MXD3Q9BW11 206 aa11.82□□□□□ -0.52
RPL28-201ENST00000344063 VIPAS39Q9H9C1 493 aa11.82□□□□□ -0.52
RPL28-201ENST00000344063 VPS37BQ9H9H4 285 aa11.82□□□□□ -0.52
RPL28-201ENST00000344063 AGPAT5Q9NUQ2 364 aa11.82□□□□□ -0.52
RPL28-201ENST00000344063 COL15A1P39059 1388 aa11.82□□□□□ -0.52
RPL28-201ENST00000344063 PASKQ96RG2 1323 aa11.81□□□□□ -0.52
RPL28-201ENST00000344063 TMOD1P28289 359 aa11.81□□□□□ -0.52
RPL28-201ENST00000344063 LSP1P33241 339 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms