RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 MEIS2O14770 477 aa16.65■□□□□ 0.26
TPM3-208ENST00000341485 FLOT1O75955 427 aa16.65■□□□□ 0.26
TPM3-208ENST00000341485 PLA2G4AP47712 749 aa16.65■□□□□ 0.26
TPM3-208ENST00000341485 AMPD2Q01433 879 aa16.65■□□□□ 0.26
TPM3-208ENST00000341485 EAPPQ56P03 285 aaPredicted RBP16.65■□□□□ 0.26
TPM3-208ENST00000341485 FIGNQ5HY92 759 aa16.65■□□□□ 0.26
TPM3-208ENST00000341485 HYIQ5T013 277 aa16.65■□□□□ 0.26
TPM3-208ENST00000341485 FKBP15Q5T1M5 1219 aa16.65■□□□□ 0.26
TPM3-208ENST00000341485 GLIS3Q8NEA6 775 aa16.65■□□□□ 0.26
TPM3-208ENST00000341485 DNAJC19Q96DA6 116 aa16.65■□□□□ 0.26
TPM3-208ENST00000341485 LRRC27Q9C0I9 530 aa16.65■□□□□ 0.26
TPM3-208ENST00000341485 HAUS4Q9H6D7 363 aa16.65■□□□□ 0.26
TPM3-208ENST00000341485 RPAP3Q9H6T3 665 aaPredicted RBP16.65■□□□□ 0.26
TPM3-208ENST00000341485 TFR2Q9UP52 801 aa16.65■□□□□ 0.26
TPM3-208ENST00000341485 MRPL11Q9Y3B7 192 aaKnown RBP16.65■□□□□ 0.26
TPM3-208ENST00000341485 CTDP1Q9Y5B0 961 aaPredicted RBP16.65■□□□□ 0.26
TPM3-208ENST00000341485 A0A1W2PQJ5 194 aa16.64■□□□□ 0.25
TPM3-208ENST00000341485 IQCA1LA6NCM1 817 aa16.64■□□□□ 0.25
TPM3-208ENST00000341485 MARCH6O60337 910 aa16.64■□□□□ 0.25
TPM3-208ENST00000341485 NF2P35240 595 aa16.64■□□□□ 0.25
TPM3-208ENST00000341485 LRRC41Q15345 812 aa16.64■□□□□ 0.25
TPM3-208ENST00000341485 VWA3BQ502W6 1294 aa16.64■□□□□ 0.25
TPM3-208ENST00000341485 ZC3H15Q8WU90 426 aaKnown RBP16.64■□□□□ 0.25
TPM3-208ENST00000341485 UIMC1Q96RL1 719 aa16.64■□□□□ 0.25
TPM3-208ENST00000341485 PRDM4Q9UKN5 801 aa16.64■□□□□ 0.25
TPM3-208ENST00000341485 PCDHA12Q9UN75 941 aa16.64■□□□□ 0.25
TPM3-208ENST00000341485 ABCB11O95342 1321 aa16.64■□□□□ 0.25
TPM3-208ENST00000341485 C19orf81C9J6K1 198 aa16.63■□□□□ 0.25
TPM3-208ENST00000341485 TBC1D8O95759 1140 aa16.63■□□□□ 0.25
TPM3-208ENST00000341485 FOSP01100 380 aaPredicted RBP16.63■□□□□ 0.25
TPM3-208ENST00000341485 LRRC63Q05C16 580 aa16.63■□□□□ 0.25
TPM3-208ENST00000341485 COASYQ13057 564 aa16.63■□□□□ 0.25
TPM3-208ENST00000341485 PSMD2Q13200 908 aa16.63■□□□□ 0.25
TPM3-208ENST00000341485 LRRC55Q6ZSA7 311 aa16.63■□□□□ 0.25
TPM3-208ENST00000341485 NHEJ1Q9H9Q4 299 aaPredicted RBP16.63■□□□□ 0.25
TPM3-208ENST00000341485 ZNHIT6Q9NWK9 470 aaKnown RBP16.63■□□□□ 0.25
TPM3-208ENST00000341485 SIK3Q9Y2K2 1263 aa16.63■□□□□ 0.25
TPM3-208ENST00000341485 ATP8B1O43520 1251 aa16.63■□□□□ 0.25
TPM3-208ENST00000341485 SASH3O75995 380 aa16.63■□□□□ 0.25
TPM3-208ENST00000341485 HOXA7P31268 230 aaPredicted RBP16.63■□□□□ 0.25
TPM3-208ENST00000341485 CYLC1P35663 651 aaPredicted RBP16.63■□□□□ 0.25
TPM3-208ENST00000341485 IREB2P48200 963 aaKnown RBP16.63■□□□□ 0.25
TPM3-208ENST00000341485 HMGCS2P54868 508 aa16.63■□□□□ 0.25
TPM3-208ENST00000341485 KRT83P78385 493 aa16.63■□□□□ 0.25
TPM3-208ENST00000341485 WHAMMP3Q1A5X7 153 aa16.63■□□□□ 0.25
TPM3-208ENST00000341485 ZNF662Q6ZS27 426 aa16.63■□□□□ 0.25
TPM3-208ENST00000341485 LDHDQ86WU2 507 aa16.63■□□□□ 0.25
TPM3-208ENST00000341485 NDST4Q9H3R1 872 aa16.63■□□□□ 0.25
TPM3-208ENST00000341485 ANKZF1Q9H8Y5 726 aa16.63■□□□□ 0.25
TPM3-208ENST00000341485 KCNMB3Q9NPA1 279 aa16.63■□□□□ 0.25
TPM3-208ENST00000341485 TMOD4Q9NZQ9 345 aa16.63■□□□□ 0.25
TPM3-208ENST00000341485 CCPG1Q9ULG6 757 aa16.63■□□□□ 0.25
TPM3-208ENST00000341485 CSADQ9Y600 493 aa16.63■□□□□ 0.25
TPM3-208ENST00000341485 EIF3CLB5ME19 914 aaKnown RBP16.62■□□□□ 0.25
TPM3-208ENST00000341485 CFBP00751 764 aa16.62■□□□□ 0.25
TPM3-208ENST00000341485 HOXA13P31271 388 aaPredicted RBP16.62■□□□□ 0.25
TPM3-208ENST00000341485 MAN2A1Q16706 1144 aa16.62■□□□□ 0.25
TPM3-208ENST00000341485 CCDC122Q5T0U0 273 aa16.62■□□□□ 0.25
TPM3-208ENST00000341485 CCDC170Q8IYT3 715 aa16.62■□□□□ 0.25
TPM3-208ENST00000341485 MBOAT7Q96N66 472 aa16.62■□□□□ 0.25
TPM3-208ENST00000341485 EIF3CQ99613 913 aaKnown RBP16.62■□□□□ 0.25
TPM3-208ENST00000341485 MYO6Q9UM54 1294 aa16.62■□□□□ 0.25
TPM3-208ENST00000341485 KDM3AQ9Y4C1 1321 aa16.62■□□□□ 0.25
TPM3-208ENST00000341485 SCN4AP35499 1836 aa16.62■□□□□ 0.25
TPM3-208ENST00000341485 CYP3A7-CYP3A51PA0A087WV96 503 aa16.61■□□□□ 0.25
TPM3-208ENST00000341485 RCCD1A6NED2 376 aa16.61■□□□□ 0.25
TPM3-208ENST00000341485 E9PMD0 336 aa16.61■□□□□ 0.25
TPM3-208ENST00000341485 GCOM1H8Y6P7 765 aaPredicted RBP16.61■□□□□ 0.25
TPM3-208ENST00000341485 OPLAHO14841 1288 aa16.61■□□□□ 0.25
TPM3-208ENST00000341485 EPHB6O15197 1021 aa16.61■□□□□ 0.25
TPM3-208ENST00000341485 FGFR1OPO95684 399 aaKnown RBP16.61■□□□□ 0.25
TPM3-208ENST00000341485 ICAM1P05362 532 aa16.61■□□□□ 0.25
TPM3-208ENST00000341485 POLR2MP0CAP2 368 aa16.61■□□□□ 0.25
TPM3-208ENST00000341485 CYP3A7P24462 503 aa16.61■□□□□ 0.25
TPM3-208ENST00000341485 CDK17Q00537 523 aa16.61■□□□□ 0.25
TPM3-208ENST00000341485 VGLL4Q14135 290 aa16.61■□□□□ 0.25
TPM3-208ENST00000341485 TTLL12Q14166 644 aaPredicted RBP16.61■□□□□ 0.25
TPM3-208ENST00000341485 KIAA1328Q86T90 577 aa16.61■□□□□ 0.25
TPM3-208ENST00000341485 JAKMIP2Q96AA8 810 aa16.61■□□□□ 0.25
TPM3-208ENST00000341485 CDCA5Q96FF9 252 aa16.61■□□□□ 0.25
TPM3-208ENST00000341485 P2RX7Q99572 595 aaKnown RBP16.61■□□□□ 0.25
TPM3-208ENST00000341485 TAF1DQ9H5J8 278 aaPredicted RBP16.61■□□□□ 0.25
TPM3-208ENST00000341485 PPP1R9AQ9ULJ8 1098 aa16.61■□□□□ 0.25
TPM3-208ENST00000341485 PHIPQ8WWQ0 1821 aa16.61■□□□□ 0.25
TPM3-208ENST00000341485 PIK3CDO00329 1044 aa16.61■□□□□ 0.25
TPM3-208ENST00000341485 ZBED4O75132 1171 aa16.61■□□□□ 0.25
TPM3-208ENST00000341485 USP11P51784 963 aa16.61■□□□□ 0.25
TPM3-208ENST00000341485 ZCWPW2Q504Y3 356 aa16.61■□□□□ 0.25
TPM3-208ENST00000341485 FOXR2Q6PJQ5 311 aa16.61■□□□□ 0.25
TPM3-208ENST00000341485 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.61■□□□□ 0.25
TPM3-208ENST00000341485 TEX2Q8IWB9 1127 aa16.61■□□□□ 0.25
TPM3-208ENST00000341485 MYOCDQ8IZQ8 938 aa16.61■□□□□ 0.25
TPM3-208ENST00000341485 CPXCR1Q8N123 301 aa16.61■□□□□ 0.25
TPM3-208ENST00000341485 MSANTD4Q8NCY6 345 aa16.61■□□□□ 0.25
TPM3-208ENST00000341485 IQCDQ96DY2 449 aa16.61■□□□□ 0.25
TPM3-208ENST00000341485 C12orf42Q96LP6 360 aa16.61■□□□□ 0.25
TPM3-208ENST00000341485 AGBL1Q96MI9 1066 aa16.61■□□□□ 0.25
TPM3-208ENST00000341485 TSG101Q99816 390 aa16.61■□□□□ 0.25
TPM3-208ENST00000341485 FGFBP2Q9BYJ0 223 aa16.61■□□□□ 0.25
TPM3-208ENST00000341485 LACRTQ9GZZ8 138 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms