RNA–Protein interactions for RNA: ENST00000341062.6

TRIM60-201, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM60, Length 1,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-201ENST00000341062 RPAP3Q9H6T3 665 aaPredicted RBP14.91□□□□□ -0.02
TRIM60-201ENST00000341062 GINM1Q9NU53 330 aa14.91□□□□□ -0.02
TRIM60-201ENST00000341062 EPN1Q9Y6I3 576 aaPredicted RBP14.91□□□□□ -0.02
TRIM60-201ENST00000341062 BRCA2P51587 3418 aa14.91□□□□□ -0.02
TRIM60-201ENST00000341062 HTTP42858 3142 aa14.91□□□□□ -0.02
TRIM60-201ENST00000341062 KDM3AQ9Y4C1 1321 aa14.91□□□□□ -0.02
TRIM60-201ENST00000341062 B4DLN1 442 aa14.91□□□□□ -0.02
TRIM60-201ENST00000341062 NDUFA10O95299 355 aa14.91□□□□□ -0.02
TRIM60-201ENST00000341062 BMP3P12645 472 aa14.91□□□□□ -0.02
TRIM60-201ENST00000341062 PRKCSHP14314 528 aaPredicted RBP14.91□□□□□ -0.02
TRIM60-201ENST00000341062 LRRC63Q05C16 580 aa14.91□□□□□ -0.02
TRIM60-201ENST00000341062 QRICH1Q2TAL8 776 aa14.91□□□□□ -0.02
TRIM60-201ENST00000341062 MIIPQ5JXC2 388 aa14.91□□□□□ -0.02
TRIM60-201ENST00000341062 GADL1Q6ZQY3 521 aa14.91□□□□□ -0.02
TRIM60-201ENST00000341062 ZNF662Q6ZS27 426 aa14.91□□□□□ -0.02
TRIM60-201ENST00000341062 ACRBPQ8NEB7 543 aa14.91□□□□□ -0.02
TRIM60-201ENST00000341062 BRI3BPQ8WY22 251 aa14.91□□□□□ -0.02
TRIM60-201ENST00000341062 AS3MTQ9HBK9 375 aa14.91□□□□□ -0.02
TRIM60-201ENST00000341062 GOPCQ9HD26 462 aa14.91□□□□□ -0.02
TRIM60-201ENST00000341062 ARGLU1Q9NWB6 273 aaPredicted RBP14.91□□□□□ -0.02
TRIM60-201ENST00000341062 A0A1W2PQJ5 194 aa14.9□□□□□ -0.02
TRIM60-201ENST00000341062 SPDYE4A6NLX3 237 aa14.9□□□□□ -0.02
TRIM60-201ENST00000341062 FGFR1OPO95684 399 aaKnown RBP14.9□□□□□ -0.02
TRIM60-201ENST00000341062 AP3B2Q13367 1082 aa14.9□□□□□ -0.02
TRIM60-201ENST00000341062 SH3D19Q5HYK7 790 aa14.9□□□□□ -0.02
TRIM60-201ENST00000341062 RGMBQ6NW40 437 aa14.9□□□□□ -0.02
TRIM60-201ENST00000341062 WDR59Q6PJI9 974 aa14.9□□□□□ -0.02
TRIM60-201ENST00000341062 GPR161Q8N6U8 529 aaKnown RBP14.9□□□□□ -0.02
TRIM60-201ENST00000341062 NUDT12Q9BQG2 462 aa14.9□□□□□ -0.02
TRIM60-201ENST00000341062 NT5C3AQ9H0P0 336 aa14.9□□□□□ -0.02
TRIM60-201ENST00000341062 R3HDMLQ9H3Y0 253 aa14.9□□□□□ -0.02
TRIM60-201ENST00000341062 CDC23Q9UJX2 597 aa14.9□□□□□ -0.02
TRIM60-201ENST00000341062 SYNPO2Q9UMS6 1093 aa14.9□□□□□ -0.02
TRIM60-201ENST00000341062 A0A0U1RQJ8 604 aa14.89□□□□□ -0.03
TRIM60-201ENST00000341062 AOC2O75106 756 aa14.89□□□□□ -0.03
TRIM60-201ENST00000341062 CLCN6P51797 869 aa14.89□□□□□ -0.03
TRIM60-201ENST00000341062 TUBB4BP68371 445 aa14.89□□□□□ -0.03
TRIM60-201ENST00000341062 ZBED6P86452 979 aa14.89□□□□□ -0.03
TRIM60-201ENST00000341062 CDK17Q00537 523 aa14.89□□□□□ -0.03
TRIM60-201ENST00000341062 TBC1D8BQ0IIM8 1120 aa14.89□□□□□ -0.03
TRIM60-201ENST00000341062 TSR1Q2NL82 804 aaKnown RBP14.89□□□□□ -0.03
TRIM60-201ENST00000341062 ATRIPQ8WXE1 791 aa14.89□□□□□ -0.03
TRIM60-201ENST00000341062 CRYGNQ8WXF5 182 aa14.89□□□□□ -0.03
TRIM60-201ENST00000341062 RABGGTAQ92696 567 aa14.89□□□□□ -0.03
TRIM60-201ENST00000341062 CHP1Q99653 195 aa14.89□□□□□ -0.03
TRIM60-201ENST00000341062 TANGO6Q9C0B7 1094 aa14.89□□□□□ -0.03
TRIM60-201ENST00000341062 SLC39A2Q9NP94 309 aa14.89□□□□□ -0.03
TRIM60-201ENST00000341062 KCNMB3Q9NPA1 279 aa14.89□□□□□ -0.03
TRIM60-201ENST00000341062 ZNF446Q9NWS9 450 aa14.89□□□□□ -0.03
TRIM60-201ENST00000341062 PCDHA12Q9UN75 941 aa14.89□□□□□ -0.03
TRIM60-201ENST00000341062 PCDHA1Q9Y5I3 950 aa14.89□□□□□ -0.03
TRIM60-201ENST00000341062 RASSF10A6NK89 507 aa14.89□□□□□ -0.03
TRIM60-201ENST00000341062 MTIF2P46199 727 aaKnown RBP14.89□□□□□ -0.03
TRIM60-201ENST00000341062 APLP1P51693 650 aa14.89□□□□□ -0.03
TRIM60-201ENST00000341062 CDC37Q16543 378 aaPredicted RBP14.89□□□□□ -0.03
TRIM60-201ENST00000341062 ZNF569Q5MCW4 686 aa14.89□□□□□ -0.03
TRIM60-201ENST00000341062 KCNK18Q7Z418 384 aa14.89□□□□□ -0.03
TRIM60-201ENST00000341062 DDX12PQ92771 950 aa14.89□□□□□ -0.03
TRIM60-201ENST00000341062 C12orf42Q96LP6 360 aa14.89□□□□□ -0.03
TRIM60-201ENST00000341062 NOC4LQ9BVI4 516 aaKnown RBP14.89□□□□□ -0.03
TRIM60-201ENST00000341062 PRR12Q9ULL5 1215 aa14.89□□□□□ -0.03
TRIM60-201ENST00000341062 REXO2Q9Y3B8 237 aaKnown RBP14.89□□□□□ -0.03
TRIM60-201ENST00000341062 CTAGE9A4FU28 777 aa14.88□□□□□ -0.03
TRIM60-201ENST00000341062 SLC10A3P09131 477 aa14.88□□□□□ -0.03
TRIM60-201ENST00000341062 FKBP15Q5T1M5 1219 aa14.88□□□□□ -0.03
TRIM60-201ENST00000341062 TEX2Q8IWB9 1127 aa14.88□□□□□ -0.03
TRIM60-201ENST00000341062 DNAJC19Q96DA6 116 aa14.88□□□□□ -0.03
TRIM60-201ENST00000341062 SLF1Q9BQI6 1058 aa14.88□□□□□ -0.03
TRIM60-201ENST00000341062 ANO3Q9BYT9 981 aa14.88□□□□□ -0.03
TRIM60-201ENST00000341062 HAUS4Q9H6D7 363 aa14.88□□□□□ -0.03
TRIM60-201ENST00000341062 CCL15-CCL14A0A0B4J2E2 113 aa14.87□□□□□ -0.03
TRIM60-201ENST00000341062 BTBD19C9JJ37 291 aa14.87□□□□□ -0.03
TRIM60-201ENST00000341062 IGF2BP3O00425 579 aaKnown RBP eCLIP14.87□□□□□ -0.03
TRIM60-201ENST00000341062 PES1O00541 588 aaKnown RBP14.87□□□□□ -0.03
TRIM60-201ENST00000341062 CXCL11O14625 94 aa14.87□□□□□ -0.03
TRIM60-201ENST00000341062 ZRANB2O95218 330 aaKnown RBP eCLIP14.87□□□□□ -0.03
TRIM60-201ENST00000341062 TRIM21P19474 475 aaKnown RBP14.87□□□□□ -0.03
TRIM60-201ENST00000341062 HNRNPH3P31942 346 aaKnown RBP14.87□□□□□ -0.03
TRIM60-201ENST00000341062 BMS1Q14692 1282 aaKnown RBP14.87□□□□□ -0.03
TRIM60-201ENST00000341062 ECM1Q16610 540 aa14.87□□□□□ -0.03
TRIM60-201ENST00000341062 CCL15Q16663 113 aa14.87□□□□□ -0.03
TRIM60-201ENST00000341062 PAXIP1Q6ZW49 1069 aaPredicted RBP14.87□□□□□ -0.03
TRIM60-201ENST00000341062 SRGAP1Q7Z6B7 1085 aa14.87□□□□□ -0.03
TRIM60-201ENST00000341062 SLFN12Q8IYM2 578 aa14.87□□□□□ -0.03
TRIM60-201ENST00000341062 CCDC170Q8IYT3 715 aa14.87□□□□□ -0.03
TRIM60-201ENST00000341062 KRT222Q8N1A0 295 aa14.87□□□□□ -0.03
TRIM60-201ENST00000341062 SLC35F6Q8N357 371 aa14.87□□□□□ -0.03
TRIM60-201ENST00000341062 CEP112Q8N8E3 955 aa14.87□□□□□ -0.03
TRIM60-201ENST00000341062 GOLGA1Q92805 767 aa14.87□□□□□ -0.03
TRIM60-201ENST00000341062 HPS3Q969F9 1004 aa14.87□□□□□ -0.03
TRIM60-201ENST00000341062 ATG4CQ96DT6 458 aa14.87□□□□□ -0.03
TRIM60-201ENST00000341062 SH2D4AQ9H788 454 aa14.87□□□□□ -0.03
TRIM60-201ENST00000341062 USP17L15C9J2P7 530 aa14.86□□□□□ -0.03
TRIM60-201ENST00000341062 C19orf81C9J6K1 198 aa14.86□□□□□ -0.03
TRIM60-201ENST00000341062 USP17L13C9JLJ4 530 aa14.86□□□□□ -0.03
TRIM60-201ENST00000341062 USP17L11C9JVI0 530 aa14.86□□□□□ -0.03
TRIM60-201ENST00000341062 USP17L18D6R9N7 530 aa14.86□□□□□ -0.03
TRIM60-201ENST00000341062 USP17L22D6RA61 530 aa14.86□□□□□ -0.03
TRIM60-201ENST00000341062 USP17L17D6RBQ6 530 aa14.86□□□□□ -0.03
TRIM60-201ENST00000341062 USP17L19D6RCP7 530 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms