RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 SMIM5Q71RC9 77 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 ILDR1Q86SU0 546 aaPredicted RBP8.32□□□□□ -1.08
HIPK1-201ENST00000340480 IFT20Q8IY31 132 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.32□□□□□ -1.08
HIPK1-201ENST00000340480 RGPD2P0DJD1 1756 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 POTEMA6NI47 508 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 WDR64B1ANS9 1081 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 C19orf81C9J6K1 198 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 ZWINTO95229 277 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 TDP2O95551 362 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 BIRC3Q13489 604 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 CEP55Q53EZ4 464 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 ANKRD35Q8N283 1001 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 RBM46Q8TBY0 533 aaKnown RBP8.32□□□□□ -1.08
HIPK1-201ENST00000340480 CEP72Q9P209 647 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 FAM205CA6NFA0 338 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 ELF2Q15723 593 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 CCDC144BQ3MJ40 725 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 BHMT2Q9H2M3 363 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 NLRC4Q9NPP4 1024 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 MTRF1LQ9UGC7 380 aaKnown RBP8.32□□□□□ -1.08
HIPK1-201ENST00000340480 USP17L15C9J2P7 530 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 USP17L13C9JLJ4 530 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 USP17L11C9JVI0 530 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 USP17L18D6R9N7 530 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 USP17L22D6RA61 530 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 USP17L17D6RBQ6 530 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 USP17L19D6RCP7 530 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 USP17L20D6RJB6 530 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 PDXKO00764 312 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 ATP2A1O14983 1001 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 USP17L24Q0WX57 530 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 COASYQ13057 564 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 ARMCX5Q6P1M9 558 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 USP17L6PQ6QN14 398 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 RIT2Q99578 217 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 DESI2Q9BSY9 194 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 IQCGQ9H095 443 aaKnown RBP8.31□□□□□ -1.08
HIPK1-201ENST00000340480 DDX39AO00148 427 aaKnown RBP8.31□□□□□ -1.08
HIPK1-201ENST00000340480 SERPING1P05155 500 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 P4HBP07237 508 aaKnown RBP8.31□□□□□ -1.08
HIPK1-201ENST00000340480 PSAPP07602 524 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 CACYBPQ9HB71 228 aaKnown RBP8.31□□□□□ -1.08
HIPK1-201ENST00000340480 ABHD10Q9NUJ1 306 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 COL18A1P39060 1754 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 SLC16A3O15427 465 aaKnown RBP8.31□□□□□ -1.08
HIPK1-201ENST00000340480 PAK2Q13177 524 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 MIS18BP1Q6P0N0 1132 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 INTS8Q75QN2 995 aaKnown RBP8.31□□□□□ -1.08
HIPK1-201ENST00000340480 FAM167AQ96KS9 214 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 CALCOCO1Q9P1Z2 691 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 A0A087WWV3 80 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 CHRNA5P30532 468 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 RAD51AP2Q09MP3 1159 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 RDM1Q8NG50 284 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 NSUN6Q8TEA1 469 aaKnown RBP8.31□□□□□ -1.08
HIPK1-201ENST00000340480 TRIM11Q96F44 468 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 KIAA1586Q9HCI6 787 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 KBTBD4Q9NVX7 518 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 GBP1P32455 592 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 DNA2P51530 1060 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 RHBDL3P58872 404 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 POLR2FP61218 127 aaKnown RBP8.31□□□□□ -1.08
HIPK1-201ENST00000340480 EN1Q05925 392 aaPredicted RBP8.31□□□□□ -1.08
HIPK1-201ENST00000340480 KCTD2Q14681 263 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 RNF207Q6ZRF8 634 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 CPVLQ9H3G5 476 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 TMEM260Q9NX78 707 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 JRKLQ9Y4A0 524 aa8.31□□□□□ -1.08
HIPK1-201ENST00000340480 MAFGO15525 162 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 SNRPFP62306 86 aaKnown RBP8.3□□□□□ -1.08
HIPK1-201ENST00000340480 SLC7A3Q8WY07 619 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 CCDC77Q9BR77 488 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 FEZ2Q9UHY8 353 aaPredicted RBP8.3□□□□□ -1.08
HIPK1-201ENST00000340480 NR1I3Q14994 352 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 EP400NLQ6ZTU2 488 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 MICALCLQ6ZW33 695 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 RNF10Q8N5U6 811 aaKnown RBP8.3□□□□□ -1.08
HIPK1-201ENST00000340480 MKL1Q969V6 931 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 PRR12Q9ULL5 1215 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 KIAA0391O15091 583 aaKnown RBP8.3□□□□□ -1.08
HIPK1-201ENST00000340480 ELMSAN1Q6PJG2 1045 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 MAATS1Q7Z4T9 603 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 GJA10Q969M2 543 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 POLR3CQ9BUI4 534 aaPredicted RBP8.3□□□□□ -1.08
HIPK1-201ENST00000340480 C1orf112Q9NSG2 853 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 CCDC151A5D8V7 595 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 HSPA6P17066 643 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 OSBPP22059 807 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 RPA1P27694 616 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 CCZ1BP86790 482 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 CCZ1P86791 482 aaPredicted RBP8.3□□□□□ -1.08
HIPK1-201ENST00000340480 TFDP1Q14186 410 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 PEX26Q7Z412 305 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 ZNF277Q9NRM2 450 aaPredicted RBP8.3□□□□□ -1.08
HIPK1-201ENST00000340480 IL17RBQ9NRM6 502 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 CAPN11Q9UMQ6 739 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 SPDYE2BA6NHP3 402 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 FOXN1O15353 648 aa8.3□□□□□ -1.08
HIPK1-201ENST00000340480 CTNND1O60716 968 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms