RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 GOLGA6L10A6NI86 522 aa15.81■□□□□ 0.12
CPSF7-201ENST00000340437 SMIM23A6NLE4 172 aa15.81■□□□□ 0.12
CPSF7-201ENST00000340437 ATP6V0A2Q9Y487 856 aa15.81■□□□□ 0.12
CPSF7-201ENST00000340437 E7EVH7 732 aa15.81■□□□□ 0.12
CPSF7-201ENST00000340437 RPS6KA5O75582 802 aa15.81■□□□□ 0.12
CPSF7-201ENST00000340437 PLS1Q14651 629 aa15.81■□□□□ 0.12
CPSF7-201ENST00000340437 EMBQ6PCB8 327 aa15.81■□□□□ 0.12
CPSF7-201ENST00000340437 OTUD6BQ8N6M0 293 aa15.81■□□□□ 0.12
CPSF7-201ENST00000340437 PLAAQ9Y263 795 aa15.81■□□□□ 0.12
CPSF7-201ENST00000340437 NOL4O94818 638 aa15.81■□□□□ 0.12
CPSF7-201ENST00000340437 ABCB4P21439 1286 aa15.81■□□□□ 0.12
CPSF7-201ENST00000340437 CDK17Q00537 523 aa15.81■□□□□ 0.12
CPSF7-201ENST00000340437 SHROOM1Q2M3G4 852 aaPredicted RBP15.81■□□□□ 0.12
CPSF7-201ENST00000340437 JMJD4Q9H9V9 463 aa15.81■□□□□ 0.12
CPSF7-201ENST00000340437 CEP72Q9P209 647 aa15.81■□□□□ 0.12
CPSF7-201ENST00000340437 CETN3O15182 167 aa15.8■□□□□ 0.12
CPSF7-201ENST00000340437 CDCA7Q9BWT1 371 aaPredicted RBP15.8■□□□□ 0.12
CPSF7-201ENST00000340437 GOPCQ9HD26 462 aa15.8■□□□□ 0.12
CPSF7-201ENST00000340437 MTMR4Q9NYA4 1195 aa15.8■□□□□ 0.12
CPSF7-201ENST00000340437 GGA1Q9UJY5 639 aa15.8■□□□□ 0.12
CPSF7-201ENST00000340437 ZNF233A6NK53 670 aa15.8■□□□□ 0.12
CPSF7-201ENST00000340437 CASP5P51878 434 aa15.8■□□□□ 0.12
CPSF7-201ENST00000340437 PSMC6P62333 389 aa15.8■□□□□ 0.12
CPSF7-201ENST00000340437 PTK2Q05397 1052 aa15.8■□□□□ 0.12
CPSF7-201ENST00000340437 GRAPQ13588 217 aa15.8■□□□□ 0.12
CPSF7-201ENST00000340437 LLGL1Q15334 1064 aa15.8■□□□□ 0.12
CPSF7-201ENST00000340437 DOK7Q18PE1 504 aa15.8■□□□□ 0.12
CPSF7-201ENST00000340437 EFCAB13Q8IY85 973 aa15.8■□□□□ 0.12
CPSF7-201ENST00000340437 GPATCH11Q8N954 259 aa15.8■□□□□ 0.12
CPSF7-201ENST00000340437 GRAPLQ8TC17 118 aaPredicted RBP15.8■□□□□ 0.12
CPSF7-201ENST00000340437 HAS1Q92839 578 aa15.8■□□□□ 0.12
CPSF7-201ENST00000340437 CUL5Q93034 780 aa15.8■□□□□ 0.12
CPSF7-201ENST00000340437 RIC8AQ9NPQ8 531 aa15.8■□□□□ 0.12
CPSF7-201ENST00000340437 LRP5O75197 1615 aa15.8■□□□□ 0.12
CPSF7-201ENST00000340437 A0A087WUV0 522 aaPredicted RBP15.8■□□□□ 0.12
CPSF7-201ENST00000340437 MRPL12P52815 198 aaKnown RBP15.8■□□□□ 0.12
CPSF7-201ENST00000340437 CHMP2AO43633 222 aa15.79■□□□□ 0.12
CPSF7-201ENST00000340437 PPP1R11O60927 126 aaPredicted RBP15.79■□□□□ 0.12
CPSF7-201ENST00000340437 RPS6KA4O75676 772 aa15.79■□□□□ 0.12
CPSF7-201ENST00000340437 COPB2P35606 906 aa15.79■□□□□ 0.12
CPSF7-201ENST00000340437 MSL1Q68DK7 614 aa15.79■□□□□ 0.12
CPSF7-201ENST00000340437 RDH13Q8NBN7 331 aa15.79■□□□□ 0.12
CPSF7-201ENST00000340437 U2AF1L4Q8WU68 220 aaKnown RBP15.79■□□□□ 0.12
CPSF7-201ENST00000340437 HDAC9Q9UKV0 1011 aa15.79■□□□□ 0.12
CPSF7-201ENST00000340437 PLCH1Q4KWH8 1693 aa15.79■□□□□ 0.12
CPSF7-201ENST00000340437 ZNF662Q6ZS27 426 aa15.79■□□□□ 0.12
CPSF7-201ENST00000340437 KSR1Q8IVT5 923 aa15.79■□□□□ 0.12
CPSF7-201ENST00000340437 UHMK1Q8TAS1 419 aaKnown RBP15.79■□□□□ 0.12
CPSF7-201ENST00000340437 DNAJC19Q96DA6 116 aa15.79■□□□□ 0.12
CPSF7-201ENST00000340437 TMX4Q9H1E5 349 aaPredicted RBP15.79■□□□□ 0.12
CPSF7-201ENST00000340437 LEMD3Q9Y2U8 911 aa15.79■□□□□ 0.12
CPSF7-201ENST00000340437 EDIL3O43854 480 aa15.79■□□□□ 0.12
CPSF7-201ENST00000340437 NR1D1P20393 614 aa15.79■□□□□ 0.12
CPSF7-201ENST00000340437 HNRNPH3P31942 346 aaKnown RBP15.79■□□□□ 0.12
CPSF7-201ENST00000340437 FXR2P51116 673 aaKnown RBP eCLIP15.79■□□□□ 0.12
CPSF7-201ENST00000340437 IFT88Q13099 833 aa15.79■□□□□ 0.12
CPSF7-201ENST00000340437 TRAPPC3LQ5T215 181 aa15.79■□□□□ 0.12
CPSF7-201ENST00000340437 FAM196AQ6ZSG2 479 aa15.79■□□□□ 0.12
CPSF7-201ENST00000340437 PCDHA1Q9Y5I3 950 aa15.79■□□□□ 0.12
CPSF7-201ENST00000340437 MYO1FO00160 1098 aa15.78■□□□□ 0.12
CPSF7-201ENST00000340437 TNNC1P63316 161 aa15.78■□□□□ 0.12
CPSF7-201ENST00000340437 SLC20A2Q08357 652 aa15.78■□□□□ 0.12
CPSF7-201ENST00000340437 SLC18A3Q16572 532 aa15.78■□□□□ 0.12
CPSF7-201ENST00000340437 ALS2CLQ60I27 953 aa15.78■□□□□ 0.12
CPSF7-201ENST00000340437 SCFD1Q8WVM8 642 aa15.78■□□□□ 0.12
CPSF7-201ENST00000340437 LRRC27Q9C0I9 530 aa15.78■□□□□ 0.12
CPSF7-201ENST00000340437 USP40Q9NVE5 1235 aa15.78■□□□□ 0.12
CPSF7-201ENST00000340437 GRID2IPA4D2P6 1211 aa15.78■□□□□ 0.12
CPSF7-201ENST00000340437 RSPH10B2B2RC85 870 aa15.78■□□□□ 0.12
CPSF7-201ENST00000340437 RSPH10BP0C881 870 aa15.78■□□□□ 0.12
CPSF7-201ENST00000340437 TMOD1P28289 359 aa15.78■□□□□ 0.12
CPSF7-201ENST00000340437 PPP4CP60510 307 aa15.78■□□□□ 0.12
CPSF7-201ENST00000340437 NAB2Q15742 525 aa15.78■□□□□ 0.12
CPSF7-201ENST00000340437 CELF4Q9BZC1 486 aaKnown RBP15.78■□□□□ 0.12
CPSF7-201ENST00000340437 ARMCX3Q9UH62 379 aaPredicted RBP15.78■□□□□ 0.12
CPSF7-201ENST00000340437 AMACRQ9UHK6 382 aa15.78■□□□□ 0.12
CPSF7-201ENST00000340437 KRIT1O00522 736 aa15.78■□□□□ 0.12
CPSF7-201ENST00000340437 CTNNA1P35221 906 aaKnown RBP15.78■□□□□ 0.12
CPSF7-201ENST00000340437 ZNF76P36508 570 aa15.78■□□□□ 0.12
CPSF7-201ENST00000340437 DAAM2Q86T65 1068 aa15.78■□□□□ 0.12
CPSF7-201ENST00000340437 SFR1Q86XK3 245 aa15.78■□□□□ 0.12
CPSF7-201ENST00000340437 TLDC2A0PJX2 215 aa15.77■□□□□ 0.12
CPSF7-201ENST00000340437 MED24O75448 989 aa15.77■□□□□ 0.12
CPSF7-201ENST00000340437 GFPT2O94808 682 aa15.77■□□□□ 0.12
CPSF7-201ENST00000340437 GCNT3O95395 438 aa15.77■□□□□ 0.12
CPSF7-201ENST00000340437 ITGA4P13612 1032 aa15.77■□□□□ 0.12
CPSF7-201ENST00000340437 KCNA1Q09470 495 aa15.77■□□□□ 0.12
CPSF7-201ENST00000340437 ICE2Q659A1 982 aa15.77■□□□□ 0.12
CPSF7-201ENST00000340437 ALKBH5Q6P6C2 394 aaKnown RBP15.77■□□□□ 0.12
CPSF7-201ENST00000340437 PEX26Q7Z412 305 aa15.77■□□□□ 0.12
CPSF7-201ENST00000340437 RIOX1Q9H6W3 641 aa15.77■□□□□ 0.12
CPSF7-201ENST00000340437 PNMA6FA0A0J9YX94 578 aa15.77■□□□□ 0.11
CPSF7-201ENST00000340437 MYBP10242 640 aa15.77■□□□□ 0.11
CPSF7-201ENST00000340437 HOXA13P31271 388 aaPredicted RBP15.77■□□□□ 0.11
CPSF7-201ENST00000340437 CASP4P49662 377 aa15.77■□□□□ 0.11
CPSF7-201ENST00000340437 UBXN2AP68543 259 aa15.77■□□□□ 0.11
CPSF7-201ENST00000340437 MKRN4PQ13434 485 aaPredicted RBP15.77■□□□□ 0.11
CPSF7-201ENST00000340437 ASTE1Q2TB18 679 aaPredicted RBP15.77■□□□□ 0.11
CPSF7-201ENST00000340437 MAEAQ7L5Y9 396 aa15.77■□□□□ 0.11
CPSF7-201ENST00000340437 ZNF571Q7Z3V5 609 aaPredicted RBP15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms