RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 TRIM50Q86XT4 487 aa17.3■□□□□ 0.36
UBE3B-201ENST00000340074 TRIM43Q96BQ3 446 aaPredicted RBP17.3■□□□□ 0.36
UBE3B-201ENST00000340074 MBOAT7Q96N66 472 aa17.3■□□□□ 0.36
UBE3B-201ENST00000340074 TUT1Q9H6E5 874 aaKnown RBP17.3■□□□□ 0.36
UBE3B-201ENST00000340074 TRMT13Q9NUP7 481 aaKnown RBP17.3■□□□□ 0.36
UBE3B-201ENST00000340074 KIAA0355O15063 1070 aa17.29■□□□□ 0.36
UBE3B-201ENST00000340074 MSH4O15457 936 aa17.29■□□□□ 0.36
UBE3B-201ENST00000340074 ACTR2P61160 394 aa17.29■□□□□ 0.36
UBE3B-201ENST00000340074 PTPN11Q06124 597 aaPredicted RBP17.29■□□□□ 0.36
UBE3B-201ENST00000340074 CUL4AQ13619 759 aa17.29■□□□□ 0.36
UBE3B-201ENST00000340074 TBC1D22BQ9NU19 505 aa17.29■□□□□ 0.36
UBE3B-201ENST00000340074 DDX25Q9UHL0 483 aaKnown RBP17.29■□□□□ 0.36
UBE3B-201ENST00000340074 KIF3AQ9Y496 699 aa17.29■□□□□ 0.36
UBE3B-201ENST00000340074 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.29■□□□□ 0.36
UBE3B-201ENST00000340074 SLC37A4O43826 429 aa17.28■□□□□ 0.36
UBE3B-201ENST00000340074 CCNT1O60563 726 aaKnown RBP17.28■□□□□ 0.36
UBE3B-201ENST00000340074 CCNE2O96020 404 aa17.28■□□□□ 0.36
UBE3B-201ENST00000340074 ITGB8P26012 769 aa17.28■□□□□ 0.36
UBE3B-201ENST00000340074 MDM2Q00987 491 aaPredicted RBP17.28■□□□□ 0.36
UBE3B-201ENST00000340074 GDF6Q6KF10 455 aaPredicted RBP17.28■□□□□ 0.36
UBE3B-201ENST00000340074 SESTD1Q86VW0 696 aa17.28■□□□□ 0.36
UBE3B-201ENST00000340074 C7orf31Q8N865 590 aa17.28■□□□□ 0.36
UBE3B-201ENST00000340074 GJA10Q969M2 543 aa17.28■□□□□ 0.36
UBE3B-201ENST00000340074 HDAC6Q9UBN7 1215 aa17.28■□□□□ 0.36
UBE3B-201ENST00000340074 TBX21Q9UL17 535 aa17.28■□□□□ 0.36
UBE3B-201ENST00000340074 ZNF215Q9UL58 517 aaPredicted RBP17.28■□□□□ 0.36
UBE3B-201ENST00000340074 SMC3Q9UQE7 1217 aa17.28■□□□□ 0.36
UBE3B-201ENST00000340074 SCN5AQ14524 2016 aa17.27■□□□□ 0.36
UBE3B-201ENST00000340074 ATG7O95352 703 aa17.27■□□□□ 0.35
UBE3B-201ENST00000340074 RAG1P15918 1043 aa17.27■□□□□ 0.35
UBE3B-201ENST00000340074 MAGEA10P43363 369 aaPredicted RBP17.27■□□□□ 0.35
UBE3B-201ENST00000340074 PPP4R3AQ6IN85 833 aa17.27■□□□□ 0.35
UBE3B-201ENST00000340074 SLC5A5Q92911 643 aa17.27■□□□□ 0.35
UBE3B-201ENST00000340074 PCYT2Q99447 389 aa17.27■□□□□ 0.35
UBE3B-201ENST00000340074 FOXP1Q9H334 677 aaPredicted RBP17.27■□□□□ 0.35
UBE3B-201ENST00000340074 GTF2IRD1Q9UHL9 959 aa17.27■□□□□ 0.35
UBE3B-201ENST00000340074 LAMA2P24043 3122 aaKnown RBP17.27■□□□□ 0.35
UBE3B-201ENST00000340074 TANC1Q9C0D5 1861 aa17.27■□□□□ 0.35
UBE3B-201ENST00000340074 EMSYQ7Z589 1322 aa17.26■□□□□ 0.35
UBE3B-201ENST00000340074 GAS7O60861 476 aa17.26■□□□□ 0.35
UBE3B-201ENST00000340074 LGR5O75473 907 aa17.26■□□□□ 0.35
UBE3B-201ENST00000340074 GCFC2P16383 781 aaKnown RBP17.26■□□□□ 0.35
UBE3B-201ENST00000340074 PTGISQ16647 500 aa17.26■□□□□ 0.35
UBE3B-201ENST00000340074 LRCH2Q5VUJ6 765 aa17.26■□□□□ 0.35
UBE3B-201ENST00000340074 CHRDL2Q6WN34 429 aa17.26■□□□□ 0.35
UBE3B-201ENST00000340074 ETNPPLQ8TBG4 499 aa17.26■□□□□ 0.35
UBE3B-201ENST00000340074 GLG1Q92896 1179 aa17.26■□□□□ 0.35
UBE3B-201ENST00000340074 LBHD1Q9BQE6 289 aaPredicted RBP17.26■□□□□ 0.35
UBE3B-201ENST00000340074 RNPEPQ9H4A4 650 aa17.26■□□□□ 0.35
UBE3B-201ENST00000340074 SMARCAD1Q9H4L7 1026 aa17.26■□□□□ 0.35
UBE3B-201ENST00000340074 KIF28PB7ZC32 967 aa17.25■□□□□ 0.35
UBE3B-201ENST00000340074 K7ELQ4 463 aaPredicted RBP17.25■□□□□ 0.35
UBE3B-201ENST00000340074 WNT7AO00755 349 aa17.25■□□□□ 0.35
UBE3B-201ENST00000340074 TIMP1P01033 207 aa17.25■□□□□ 0.35
UBE3B-201ENST00000340074 SUPT20HL2P0C7V6 817 aa17.25■□□□□ 0.35
UBE3B-201ENST00000340074 SMIM10L2AP0DMW4 78 aa17.25■□□□□ 0.35
UBE3B-201ENST00000340074 SMIM10L2BP0DMW5 78 aa17.25■□□□□ 0.35
UBE3B-201ENST00000340074 CYP2C9P11712 490 aa17.25■□□□□ 0.35
UBE3B-201ENST00000340074 MARK3P27448 753 aa17.25■□□□□ 0.35
UBE3B-201ENST00000340074 KRT76Q01546 638 aa17.25■□□□□ 0.35
UBE3B-201ENST00000340074 GNL2Q13823 731 aaKnown RBP17.25■□□□□ 0.35
UBE3B-201ENST00000340074 HIC1Q14526 733 aa17.25■□□□□ 0.35
UBE3B-201ENST00000340074 ZNF746Q6NUN9 644 aaPredicted RBP17.25■□□□□ 0.35
UBE3B-201ENST00000340074 ABHD15Q6UXT9 468 aa17.25■□□□□ 0.35
UBE3B-201ENST00000340074 BADQ92934 168 aa17.25■□□□□ 0.35
UBE3B-201ENST00000340074 SNX21Q969T3 373 aa17.25■□□□□ 0.35
UBE3B-201ENST00000340074 RIT2Q99578 217 aa17.25■□□□□ 0.35
UBE3B-201ENST00000340074 NAP1L4Q99733 375 aaKnown RBP17.25■□□□□ 0.35
UBE3B-201ENST00000340074 GDF15Q99988 308 aa17.25■□□□□ 0.35
UBE3B-201ENST00000340074 TEKT3Q9BXF9 490 aa17.25■□□□□ 0.35
UBE3B-201ENST00000340074 PPP1R12CQ9BZL4 782 aa17.25■□□□□ 0.35
UBE3B-201ENST00000340074 ERAP1Q9NZ08 941 aa17.25■□□□□ 0.35
UBE3B-201ENST00000340074 TCEAL9Q9UHQ7 104 aa17.25■□□□□ 0.35
UBE3B-201ENST00000340074 EVPLQ92817 2033 aa17.25■□□□□ 0.35
UBE3B-201ENST00000340074 IGKV6D-21A0A0A0MT36 114 aa17.24■□□□□ 0.35
UBE3B-201ENST00000340074 PSMD10O75832 226 aa17.24■□□□□ 0.35
UBE3B-201ENST00000340074 ZNF200P98182 395 aaPredicted RBP17.24■□□□□ 0.35
UBE3B-201ENST00000340074 MIS18BP1Q6P0N0 1132 aa17.24■□□□□ 0.35
UBE3B-201ENST00000340074 POTEDQ86YR6 584 aa17.24■□□□□ 0.35
UBE3B-201ENST00000340074 SMAP1Q8IYB5 467 aaPredicted RBP17.24■□□□□ 0.35
UBE3B-201ENST00000340074 CTAGE1Q96RT6 745 aa17.24■□□□□ 0.35
UBE3B-201ENST00000340074 HIPK3Q9H422 1215 aa17.24■□□□□ 0.35
UBE3B-201ENST00000340074 AZI2Q9H6S1 392 aa17.24■□□□□ 0.35
UBE3B-201ENST00000340074 KCNMB3Q9NPA1 279 aa17.24■□□□□ 0.35
UBE3B-201ENST00000340074 NOD1Q9Y239 953 aa17.24■□□□□ 0.35
UBE3B-201ENST00000340074 CHMP2AO43633 222 aa17.23■□□□□ 0.35
UBE3B-201ENST00000340074 U2AF2P26368 475 aaKnown RBP eCLIP17.23■□□□□ 0.35
UBE3B-201ENST00000340074 CYP2C18P33260 490 aa17.23■□□□□ 0.35
UBE3B-201ENST00000340074 STAT5BP51692 787 aa17.23■□□□□ 0.35
UBE3B-201ENST00000340074 NOSTRINQ8IVI9 506 aa17.23■□□□□ 0.35
UBE3B-201ENST00000340074 CCDC60Q8IWA6 550 aaPredicted RBP17.23■□□□□ 0.35
UBE3B-201ENST00000340074 NOC4LQ9BVI4 516 aaKnown RBP17.23■□□□□ 0.35
UBE3B-201ENST00000340074 PRO3102Q9H379 93 aa17.23■□□□□ 0.35
UBE3B-201ENST00000340074 UNC45AQ9H3U1 944 aa17.23■□□□□ 0.35
UBE3B-201ENST00000340074 COLQQ9Y215 455 aaPredicted RBP17.23■□□□□ 0.35
UBE3B-201ENST00000340074 SAMM50Q9Y512 469 aa17.23■□□□□ 0.35
UBE3B-201ENST00000340074 UMODL1Q5DID0 1318 aa17.23■□□□□ 0.35
UBE3B-201ENST00000340074 LOXHD1Q8IVV2 1947 aa17.23■□□□□ 0.35
UBE3B-201ENST00000340074 C17orf102A2RUQ5 167 aa17.22■□□□□ 0.35
UBE3B-201ENST00000340074 H3BQV1 296 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms