RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 PDAP1Q13442 181 aaKnown RBP18.03■□□□□ 0.48
LINC01116-202ENST00000339037 EPC2Q52LR7 807 aa18.03■□□□□ 0.48
LINC01116-202ENST00000339037 TMEM31Q5JXX7 168 aa18.03■□□□□ 0.48
LINC01116-202ENST00000339037 ZNF579Q8NAF0 562 aaKnown RBP18.03■□□□□ 0.48
LINC01116-202ENST00000339037 MRPL38Q96DV4 380 aaKnown RBP18.03■□□□□ 0.48
LINC01116-202ENST00000339037 SAMD11Q96NU1 681 aa18.03■□□□□ 0.48
LINC01116-202ENST00000339037 LRFN3Q9BTN0 628 aa18.03■□□□□ 0.48
LINC01116-202ENST00000339037 HCN4Q9Y3Q4 1203 aa18.03■□□□□ 0.48
LINC01116-202ENST00000339037 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.02■□□□□ 0.48
LINC01116-202ENST00000339037 CHMLP26374 656 aa18.02■□□□□ 0.48
LINC01116-202ENST00000339037 SP4Q02446 784 aa18.02■□□□□ 0.48
LINC01116-202ENST00000339037 PTPROQ16827 1216 aa18.02■□□□□ 0.48
LINC01116-202ENST00000339037 LEXMQ3ZCV2 418 aa18.02■□□□□ 0.48
LINC01116-202ENST00000339037 SMARCC2Q8TAQ2 1214 aa18.02■□□□□ 0.48
LINC01116-202ENST00000339037 KHSRPQ92945 711 aaKnown RBP eCLIP18.02■□□□□ 0.48
LINC01116-202ENST00000339037 CUL5Q93034 780 aa18.02■□□□□ 0.48
LINC01116-202ENST00000339037 TOP1MTQ969P6 601 aa18.02■□□□□ 0.48
LINC01116-202ENST00000339037 IFIH1Q9BYX4 1025 aaKnown RBP18.02■□□□□ 0.48
LINC01116-202ENST00000339037 UPP2O95045 317 aa18.01■□□□□ 0.47
LINC01116-202ENST00000339037 KIF5BP33176 963 aa18.01■□□□□ 0.47
LINC01116-202ENST00000339037 ARHGAP4P98171 946 aa18.01■□□□□ 0.47
LINC01116-202ENST00000339037 TIGD5Q53EQ6 642 aa18.01■□□□□ 0.47
LINC01116-202ENST00000339037 UTP14CQ5TAP6 766 aaKnown RBP18.01■□□□□ 0.47
LINC01116-202ENST00000339037 PCNX4Q63HM2 1172 aa18.01■□□□□ 0.47
LINC01116-202ENST00000339037 XRRA1Q6P2D8 792 aa18.01■□□□□ 0.47
LINC01116-202ENST00000339037 USP17L6PQ6QN14 398 aa18.01■□□□□ 0.47
LINC01116-202ENST00000339037 CTCFLQ8NI51 663 aaPredicted RBP18.01■□□□□ 0.47
LINC01116-202ENST00000339037 LMBR1Q8WVP7 490 aa18.01■□□□□ 0.47
LINC01116-202ENST00000339037 APBB2Q92870 758 aa18.01■□□□□ 0.47
LINC01116-202ENST00000339037 RRP36Q96EU6 259 aaKnown RBP18.01■□□□□ 0.47
LINC01116-202ENST00000339037 SENP7Q9BQF6 1050 aa18.01■□□□□ 0.47
LINC01116-202ENST00000339037 SPZ1Q9BXG8 430 aa18.01■□□□□ 0.47
LINC01116-202ENST00000339037 OSBPL7Q9BZF2 842 aa18.01■□□□□ 0.47
LINC01116-202ENST00000339037 CD320Q9NPF0 282 aa18.01■□□□□ 0.47
LINC01116-202ENST00000339037 SEC63Q9UGP8 760 aaKnown RBP18.01■□□□□ 0.47
LINC01116-202ENST00000339037 WDFY4Q6ZS81 3184 aa18.01■□□□□ 0.47
LINC01116-202ENST00000339037 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18■□□□□ 0.47
LINC01116-202ENST00000339037 PIK3CDO00329 1044 aa18■□□□□ 0.47
LINC01116-202ENST00000339037 ANTXR2P58335 489 aa18■□□□□ 0.47
LINC01116-202ENST00000339037 IGDCC4Q8TDY8 1250 aa18■□□□□ 0.47
LINC01116-202ENST00000339037 MAP3K14Q99558 947 aa18■□□□□ 0.47
LINC01116-202ENST00000339037 COL4A6Q14031 1691 aa17.99■□□□□ 0.47
LINC01116-202ENST00000339037 NRCAMQ92823 1304 aa17.99■□□□□ 0.47
LINC01116-202ENST00000339037 MUC6Q6W4X9 2439 aa17.99■□□□□ 0.47
LINC01116-202ENST00000339037 H3BNC9 293 aa17.99■□□□□ 0.47
LINC01116-202ENST00000339037 SGSM2O43147 1006 aa17.99■□□□□ 0.47
LINC01116-202ENST00000339037 GPR37L1O60883 481 aa17.99■□□□□ 0.47
LINC01116-202ENST00000339037 DDAH1O94760 285 aa17.99■□□□□ 0.47
LINC01116-202ENST00000339037 ADAM17P78536 824 aa17.99■□□□□ 0.47
LINC01116-202ENST00000339037 GPM6BQ13491 265 aa17.99■□□□□ 0.47
LINC01116-202ENST00000339037 PTCRAQ6ISU1 281 aaPredicted RBP17.99■□□□□ 0.47
LINC01116-202ENST00000339037 NLRX1Q86UT6 975 aa17.99■□□□□ 0.47
LINC01116-202ENST00000339037 FAM178BQ8IXR5 827 aa17.99■□□□□ 0.47
LINC01116-202ENST00000339037 TMEM192Q8IY95 271 aa17.99■□□□□ 0.47
LINC01116-202ENST00000339037 MB21D2Q8IYB1 491 aaPredicted RBP17.99■□□□□ 0.47
LINC01116-202ENST00000339037 ZNF654Q8IZM8 581 aa17.99■□□□□ 0.47
LINC01116-202ENST00000339037 GJD3Q8N144 294 aa17.99■□□□□ 0.47
LINC01116-202ENST00000339037 GIMAP8Q8ND71 665 aaPredicted RBP17.99■□□□□ 0.47
LINC01116-202ENST00000339037 BANK1Q8NDB2 785 aa17.99■□□□□ 0.47
LINC01116-202ENST00000339037 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.99■□□□□ 0.47
LINC01116-202ENST00000339037 KIF12Q96FN5 646 aa17.99■□□□□ 0.47
LINC01116-202ENST00000339037 C11orf16Q9NQ32 467 aa17.99■□□□□ 0.47
LINC01116-202ENST00000339037 TELO2Q9Y4R8 837 aa17.99■□□□□ 0.47
LINC01116-202ENST00000339037 ARIH1Q9Y4X5 557 aaPredicted RBP17.99■□□□□ 0.47
LINC01116-202ENST00000339037 MEIS2O14770 477 aa17.98■□□□□ 0.47
LINC01116-202ENST00000339037 CD44P16070 742 aaKnown RBP17.98■□□□□ 0.47
LINC01116-202ENST00000339037 FAM26DQ5JW98 314 aa17.98■□□□□ 0.47
LINC01116-202ENST00000339037 TAF2Q6P1X5 1199 aa17.98■□□□□ 0.47
LINC01116-202ENST00000339037 MYL10Q9BUA6 226 aa17.98■□□□□ 0.47
LINC01116-202ENST00000339037 LY9Q9HBG7 655 aa17.98■□□□□ 0.47
LINC01116-202ENST00000339037 FAM86C2PA6NEL3 165 aa17.97■□□□□ 0.47
LINC01116-202ENST00000339037 PI4K2BG5E9Z4 385 aa17.97■□□□□ 0.47
LINC01116-202ENST00000339037 H3BQ06 376 aaPredicted RBP17.97■□□□□ 0.47
LINC01116-202ENST00000339037 MAP3K13O43283 966 aa17.97■□□□□ 0.47
LINC01116-202ENST00000339037 IL9P15248 144 aa17.97■□□□□ 0.47
LINC01116-202ENST00000339037 SMARCA1P28370 1054 aa17.97■□□□□ 0.47
LINC01116-202ENST00000339037 SSTR3P32745 418 aaPredicted RBP17.97■□□□□ 0.47
LINC01116-202ENST00000339037 TCF7P36402 384 aaPredicted RBP17.97■□□□□ 0.47
LINC01116-202ENST00000339037 PUS10Q3MIT2 529 aaKnown RBP17.97■□□□□ 0.47
LINC01116-202ENST00000339037 NEK9Q8TD19 979 aa17.97■□□□□ 0.47
LINC01116-202ENST00000339037 MAP4K1Q92918 833 aa17.97■□□□□ 0.47
LINC01116-202ENST00000339037 GPRASP2Q96D09 838 aa17.97■□□□□ 0.47
LINC01116-202ENST00000339037 IL17RAQ96F46 866 aa17.97■□□□□ 0.47
LINC01116-202ENST00000339037 CDHR1Q96JP9 859 aa17.97■□□□□ 0.47
LINC01116-202ENST00000339037 LZTS2Q9BRK4 669 aa17.97■□□□□ 0.47
LINC01116-202ENST00000339037 GRXCR2A6NFK2 248 aa17.96■□□□□ 0.47
LINC01116-202ENST00000339037 CHRNA1P02708 482 aa17.96■□□□□ 0.47
LINC01116-202ENST00000339037 GHRP10912 638 aa17.96■□□□□ 0.47
LINC01116-202ENST00000339037 GNAQP50148 359 aa17.96■□□□□ 0.47
LINC01116-202ENST00000339037 PPFIA1Q13136 1202 aa17.96■□□□□ 0.47
LINC01116-202ENST00000339037 TCEAL5Q5H9L2 206 aa17.96■□□□□ 0.47
LINC01116-202ENST00000339037 CASC1Q6TDU7 716 aa17.96■□□□□ 0.47
LINC01116-202ENST00000339037 RPAINQ86UA6 219 aa17.96■□□□□ 0.47
LINC01116-202ENST00000339037 RSPH3Q86UC2 560 aa17.96■□□□□ 0.47
LINC01116-202ENST00000339037 PABPC5Q96DU9 382 aaKnown RBP17.96■□□□□ 0.47
LINC01116-202ENST00000339037 NSUN3Q9H649 340 aaKnown RBP17.96■□□□□ 0.47
LINC01116-202ENST00000339037 PSTPIP2Q9H939 334 aa17.96■□□□□ 0.47
LINC01116-202ENST00000339037 ERAP1Q9NZ08 941 aa17.96■□□□□ 0.47
LINC01116-202ENST00000339037 TUBE1Q9UJT0 475 aa17.96■□□□□ 0.47
LINC01116-202ENST00000339037 RBM8AQ9Y5S9 174 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms