RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 PPIGQ13427 754 aaKnown RBP eCLIP12.85□□□□□ -0.359e-7■■■■■ 27.7
SLC28A1-202ENST00000338602 BFSP2Q13515 415 aa12.85□□□□□ -0.35
SLC28A1-202ENST00000338602 TDHQ8IZJ6 230 aa12.85□□□□□ -0.35
SLC28A1-202ENST00000338602 GLG1Q92896 1179 aa12.85□□□□□ -0.35
SLC28A1-202ENST00000338602 C16orf70Q9BSU1 422 aa12.85□□□□□ -0.35
SLC28A1-202ENST00000338602 BACH2Q9BYV9 841 aa12.85□□□□□ -0.35
SLC28A1-202ENST00000338602 SMARCAD1Q9H4L7 1026 aa12.85□□□□□ -0.35
SLC28A1-202ENST00000338602 BCAS3Q9H6U6 928 aa12.85□□□□□ -0.35
SLC28A1-202ENST00000338602 ERAP1Q9NZ08 941 aa12.85□□□□□ -0.35
SLC28A1-202ENST00000338602 HDAC6Q9UBN7 1215 aa12.85□□□□□ -0.35
SLC28A1-202ENST00000338602 GTF2IRD1Q9UHL9 959 aa12.85□□□□□ -0.35
SLC28A1-202ENST00000338602 KIF3AQ9Y496 699 aa12.85□□□□□ -0.35
SLC28A1-202ENST00000338602 C17orf102A2RUQ5 167 aa12.84□□□□□ -0.35
SLC28A1-202ENST00000338602 JAK2O60674 1132 aa12.84□□□□□ -0.35
SLC28A1-202ENST00000338602 FDPSP14324 419 aaKnown RBP12.84□□□□□ -0.35
SLC28A1-202ENST00000338602 RPUSD2Q8IZ73 545 aaKnown RBP12.84□□□□□ -0.35
SLC28A1-202ENST00000338602 NOC4LQ9BVI4 516 aaKnown RBP12.84□□□□□ -0.35
SLC28A1-202ENST00000338602 STXBP5LQ9Y2K9 1186 aa12.84□□□□□ -0.35
SLC28A1-202ENST00000338602 DNAH12Q6ZR08 3092 aa12.84□□□□□ -0.35
SLC28A1-202ENST00000338602 IGLV3-22A0A075B6J6 115 aa12.83□□□□□ -0.36
SLC28A1-202ENST00000338602 GSTTP1A0A1W2PQM5 241 aa12.83□□□□□ -0.36
SLC28A1-202ENST00000338602 M0R2N6 131 aa12.83□□□□□ -0.36
SLC28A1-202ENST00000338602 ADAMTS3O15072 1205 aa12.83□□□□□ -0.36
SLC28A1-202ENST00000338602 CYP2C9P11712 490 aa12.83□□□□□ -0.36
SLC28A1-202ENST00000338602 CYP2C18P33260 490 aa12.83□□□□□ -0.36
SLC28A1-202ENST00000338602 ACTR2P61160 394 aa12.83□□□□□ -0.36
SLC28A1-202ENST00000338602 KRT76Q01546 638 aa12.83□□□□□ -0.36
SLC28A1-202ENST00000338602 FAM160B1Q5W0V3 765 aa12.83□□□□□ -0.36
SLC28A1-202ENST00000338602 GDF6Q6KF10 455 aaPredicted RBP12.83□□□□□ -0.36
SLC28A1-202ENST00000338602 MIS18BP1Q6P0N0 1132 aa12.83□□□□□ -0.36
SLC28A1-202ENST00000338602 MOXD1Q6UVY6 613 aa12.83□□□□□ -0.36
SLC28A1-202ENST00000338602 CAGE1Q8TC20 777 aa12.83□□□□□ -0.36
SLC28A1-202ENST00000338602 VCANP13611 3396 aa12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 CYP3A7-CYP3A51PA0A087WV96 503 aa12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 DDX39AO00148 427 aaKnown RBP12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 PITPNM1O00562 1244 aa12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 BACH1O14867 736 aa12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 MARCH6O60337 910 aa12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 MMP1P03956 469 aa12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 SMIM10L2AP0DMW4 78 aa12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 SMIM10L2BP0DMW5 78 aa12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 GCFC2P16383 781 aaKnown RBP12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 CYP3A7P24462 503 aa12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 ITGB8P26012 769 aa12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 SLC26A2P50443 739 aa12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 CCL23P55773 120 aa12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 PTK7Q13308 1070 aa12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 ITGB3BPQ13352 177 aaPredicted RBP12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 NPY5RQ15761 445 aa12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 INF2Q27J81 1249 aa12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 LETM2Q2VYF4 491 aa12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 Q4G0T1 1027 aa12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 ZNF746Q6NUN9 644 aaPredicted RBP12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 PSRC1Q6PGN9 363 aaPredicted RBP12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 PIK3AP1Q6ZUJ8 805 aa12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 PLPPR4Q7Z2D5 763 aa12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 NEK8Q86SG6 692 aa12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 DEFB123Q8N688 67 aa12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 PPP1R13LQ8WUF5 828 aa12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 ATP6V0A1Q93050 837 aa12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 C8orf76Q96K31 380 aa12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 MTIF3Q9H2K0 278 aaKnown RBP12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 PRDM6Q9NQX0 595 aa12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 EMSYQ7Z589 1322 aa12.82□□□□□ -0.36
SLC28A1-202ENST00000338602 GAS7O60861 476 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 DTNBO60941 627 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 LGR5O75473 907 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 PARNO95453 639 aaKnown RBP12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 CSF2RAP15509 400 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 RFC2P35250 354 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 STAT5BP51692 787 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 GNL2Q13823 731 aaKnown RBP12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 KRT40Q6A162 431 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 GPR153Q6NV75 609 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 TRIM50Q86XT4 487 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 SMAP1Q8IYB5 467 aaPredicted RBP12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 DIS3L2Q8IYB7 885 aaKnown RBP12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 AFAP1L1Q8TED9 768 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 RIT2Q99578 217 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 TEKT3Q9BXF9 490 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 IL23AQ9NPF7 189 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 GJB4Q9NTQ9 266 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 DDX25Q9UHL0 483 aaKnown RBP12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 SAMM50Q9Y512 469 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 NRCAMQ92823 1304 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 RRN3P2A6NIE6 340 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 WDR64B1ANS9 1081 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 CCNT1O60563 726 aaKnown RBP12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 ATG7O95352 703 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 PSAPP07602 524 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 PFKMP08237 780 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 MARK3P27448 753 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 FOSBP53539 338 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 ST3GAL1Q11201 340 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 PPFIA1Q13136 1202 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 LRIT3Q3SXY7 679 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 LRCH2Q5VUJ6 765 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 PPP4R3AQ6IN85 833 aa12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.81□□□□□ -0.36
SLC28A1-202ENST00000338602 OXER1Q8TDS5 423 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms