RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 PDCLQ13371 301 aa14.89□□□□□ -0.03
RTN4-202ENST00000337526 IQCB1Q15051 598 aa14.89□□□□□ -0.03
RTN4-202ENST00000337526 DCAF15Q66K64 600 aa14.89□□□□□ -0.03
RTN4-202ENST00000337526 CC2D2BQ6DHV5 1058 aa14.89□□□□□ -0.03
RTN4-202ENST00000337526 SCYL3Q8IZE3 742 aa14.89□□□□□ -0.03
RTN4-202ENST00000337526 CNKSR1Q969H4 720 aa14.89□□□□□ -0.03
RTN4-202ENST00000337526 DHX36Q9H2U1 1008 aaKnown RBP14.89□□□□□ -0.03
RTN4-202ENST00000337526 AFG3L2Q9Y4W6 797 aa14.89□□□□□ -0.03
RTN4-202ENST00000337526 KIF28PB7ZC32 967 aa14.89□□□□□ -0.03
RTN4-202ENST00000337526 EVI5O60447 810 aa14.89□□□□□ -0.03
RTN4-202ENST00000337526 CEP170P1Q96L14 293 aa14.89□□□□□ -0.03
RTN4-202ENST00000337526 POTEMA6NI47 508 aa14.89□□□□□ -0.03
RTN4-202ENST00000337526 PALMO75781 387 aa14.89□□□□□ -0.03
RTN4-202ENST00000337526 EXOSC10Q01780 885 aaKnown RBP14.89□□□□□ -0.03
RTN4-202ENST00000337526 PPP2R5AQ15172 486 aa14.89□□□□□ -0.03
RTN4-202ENST00000337526 TMEM47Q9BQJ4 181 aa14.89□□□□□ -0.03
RTN4-202ENST00000337526 ANO3Q9BYT9 981 aa14.89□□□□□ -0.03
RTN4-202ENST00000337526 MRPL47Q9HD33 250 aaKnown RBP14.89□□□□□ -0.03
RTN4-202ENST00000337526 PI4KBQ9UBF8 816 aa14.89□□□□□ -0.03
RTN4-202ENST00000337526 RPS6KA2Q15349 733 aa14.88□□□□□ -0.03
RTN4-202ENST00000337526 ZMYND12Q9H0C1 365 aa14.88□□□□□ -0.03
RTN4-202ENST00000337526 SEPT9Q9UHD8 586 aaPredicted RBP14.88□□□□□ -0.03
RTN4-202ENST00000337526 LRRC53A6NM62 1247 aa14.88□□□□□ -0.03
RTN4-202ENST00000337526 KCNF1Q9H3M0 494 aa14.88□□□□□ -0.03
RTN4-202ENST00000337526 MORC2Q9Y6X9 1032 aaPredicted RBP14.88□□□□□ -0.03
RTN4-202ENST00000337526 PPEF1O14829 653 aaPredicted RBP14.88□□□□□ -0.03
RTN4-202ENST00000337526 SH3BP5O60239 455 aa14.88□□□□□ -0.03
RTN4-202ENST00000337526 PDE1BQ01064 536 aa14.88□□□□□ -0.03
RTN4-202ENST00000337526 CDC37Q16543 378 aaPredicted RBP14.88□□□□□ -0.03
RTN4-202ENST00000337526 NXNQ6DKJ4 435 aa14.88□□□□□ -0.03
RTN4-202ENST00000337526 CDKL2Q92772 493 aa14.88□□□□□ -0.03
RTN4-202ENST00000337526 DBNDD1Q9H9R9 158 aa14.88□□□□□ -0.03
RTN4-202ENST00000337526 PVALEFA0A1B0GWK0 134 aa14.88□□□□□ -0.03
RTN4-202ENST00000337526 GSG1L2A8MUP6 293 aa14.88□□□□□ -0.03
RTN4-202ENST00000337526 STAT2P52630 851 aa14.88□□□□□ -0.03
RTN4-202ENST00000337526 SCARF1Q14162 830 aa14.88□□□□□ -0.03
RTN4-202ENST00000337526 TMC4Q7Z404 712 aa14.88□□□□□ -0.03
RTN4-202ENST00000337526 FLAD1Q8NFF5 587 aa14.88□□□□□ -0.03
RTN4-202ENST00000337526 CSADQ9Y600 493 aa14.88□□□□□ -0.03
RTN4-202ENST00000337526 SFI1A8K8P3 1242 aa14.87□□□□□ -0.03
RTN4-202ENST00000337526 GOLGA8SH3BPF8 625 aa14.87□□□□□ -0.03
RTN4-202ENST00000337526 NMT2O60551 498 aa14.87□□□□□ -0.03
RTN4-202ENST00000337526 FAM133BQ5BKY9 247 aaKnown RBP14.87□□□□□ -0.03
RTN4-202ENST00000337526 FAM81BQ96LP2 452 aa14.87□□□□□ -0.03
RTN4-202ENST00000337526 KIF3CO14782 793 aa14.87□□□□□ -0.03
RTN4-202ENST00000337526 TMED2Q15363 201 aa14.87□□□□□ -0.03
RTN4-202ENST00000337526 TXNRD1Q16881 649 aa14.87□□□□□ -0.03
RTN4-202ENST00000337526 SYDE2Q5VT97 1194 aa14.87□□□□□ -0.03
RTN4-202ENST00000337526 CLEC4GQ6UXB4 293 aa14.87□□□□□ -0.03
RTN4-202ENST00000337526 PDZD4Q76G19 769 aaPredicted RBP14.87□□□□□ -0.03
RTN4-202ENST00000337526 DPF2Q92785 391 aa14.87□□□□□ -0.03
RTN4-202ENST00000337526 WDR24Q96S15 920 aa14.87□□□□□ -0.03
RTN4-202ENST00000337526 DCP1AQ9NPI6 582 aaPredicted RBP14.87□□□□□ -0.03
RTN4-202ENST00000337526 CEP72Q9P209 647 aa14.87□□□□□ -0.03
RTN4-202ENST00000337526 TET3O43151 1660 aa14.87□□□□□ -0.03
RTN4-202ENST00000337526 PEX19P40855 299 aa14.87□□□□□ -0.03
RTN4-202ENST00000337526 TRIP13Q15645 432 aaPredicted RBP14.87□□□□□ -0.03
RTN4-202ENST00000337526 RINT1Q6NUQ1 792 aa14.87□□□□□ -0.03
RTN4-202ENST00000337526 RHOT2Q8IXI1 618 aa14.87□□□□□ -0.03
RTN4-202ENST00000337526 PROM2Q8N271 834 aa14.87□□□□□ -0.03
RTN4-202ENST00000337526 NACA2Q9H009 215 aa14.87□□□□□ -0.03
RTN4-202ENST00000337526 ACTR5Q9H9F9 607 aaPredicted RBP14.87□□□□□ -0.03
RTN4-202ENST00000337526 PLAAQ9Y263 795 aa14.87□□□□□ -0.03
RTN4-202ENST00000337526 HOXA13P31271 388 aaPredicted RBP14.86□□□□□ -0.03
RTN4-202ENST00000337526 GGCXP38435 758 aa14.86□□□□□ -0.03
RTN4-202ENST00000337526 E2F4Q16254 413 aa14.86□□□□□ -0.03
RTN4-202ENST00000337526 E4F1Q66K89 784 aaPredicted RBP14.86□□□□□ -0.03
RTN4-202ENST00000337526 NME8Q8N427 588 aa14.86□□□□□ -0.03
RTN4-202ENST00000337526 OPHN1O60890 802 aa14.86□□□□□ -0.03
RTN4-202ENST00000337526 RNASELQ05823 741 aaKnown RBP14.86□□□□□ -0.03
RTN4-202ENST00000337526 CTTNQ14247 550 aaKnown RBP14.86□□□□□ -0.03
RTN4-202ENST00000337526 MTF1Q14872 753 aa14.86□□□□□ -0.03
RTN4-202ENST00000337526 C6orf118Q5T5N4 469 aa14.86□□□□□ -0.03
RTN4-202ENST00000337526 METTL16Q86W50 562 aaKnown RBP14.86□□□□□ -0.03
RTN4-202ENST00000337526 FAM83BQ5T0W9 1011 aa14.86□□□□□ -0.03
RTN4-202ENST00000337526 RASIP1Q5U651 963 aa14.86□□□□□ -0.03
RTN4-202ENST00000337526 RFX6Q8HWS3 928 aa14.86□□□□□ -0.03
RTN4-202ENST00000337526 JPH2Q9BR39 696 aaPredicted RBP14.86□□□□□ -0.03
RTN4-202ENST00000337526 IRX2Q9BZI1 471 aaPredicted RBP14.86□□□□□ -0.03
RTN4-202ENST00000337526 ABCC3O15438 1527 aa14.86□□□□□ -0.03
RTN4-202ENST00000337526 LRRC7Q96NW7 1537 aa14.86□□□□□ -0.03
RTN4-202ENST00000337526 LUC7L3O95232 432 aaKnown RBP14.86□□□□□ -0.03
RTN4-202ENST00000337526 SAT1P21673 171 aa14.86□□□□□ -0.03
RTN4-202ENST00000337526 MSH2P43246 934 aa14.86□□□□□ -0.03
RTN4-202ENST00000337526 GABPAQ06546 454 aa14.86□□□□□ -0.03
RTN4-202ENST00000337526 SH3RF3Q8TEJ3 882 aaPredicted RBP14.86□□□□□ -0.03
RTN4-202ENST00000337526 HDAC6Q9UBN7 1215 aa14.86□□□□□ -0.03
RTN4-202ENST00000337526 SRP68Q9UHB9 627 aaKnown RBP14.86□□□□□ -0.03
RTN4-202ENST00000337526 SNX24Q9Y343 169 aa14.86□□□□□ -0.03
RTN4-202ENST00000337526 MRFAP1Q9Y605 127 aa14.86□□□□□ -0.03
RTN4-202ENST00000337526 ADGRL3Q9HAR2 1447 aa14.86□□□□□ -0.03
RTN4-202ENST00000337526 EXOC1LA0A1B0GW35 172 aa14.85□□□□□ -0.03
RTN4-202ENST00000337526 EIF3CLB5ME19 914 aaKnown RBP14.85□□□□□ -0.03
RTN4-202ENST00000337526 SART1O43290 800 aaKnown RBP14.85□□□□□ -0.03
RTN4-202ENST00000337526 GFPT1Q06210 699 aaPredicted RBP14.85□□□□□ -0.03
RTN4-202ENST00000337526 HACE1Q8IYU2 909 aa14.85□□□□□ -0.03
RTN4-202ENST00000337526 EIF3CQ99613 913 aaKnown RBP14.85□□□□□ -0.03
RTN4-202ENST00000337526 ISCA1Q9BUE6 129 aa14.85□□□□□ -0.03
RTN4-202ENST00000337526 MXD3Q9BW11 206 aa14.85□□□□□ -0.03
RTN4-202ENST00000337526 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms