RNA–Protein interactions for RNA: ENST00000337019.7

PACRG-201, Transcript of parkin coregulated, humanhuman

TSL 2 BASIC

Gene PACRG, Length 1,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-201ENST00000337019 SENP7Q9BQF6 1050 aa9.55□□□□□ -0.88
PACRG-201ENST00000337019 SDF4Q9BRK5 362 aa9.55□□□□□ -0.88
PACRG-201ENST00000337019 ALG1Q9BT22 464 aa9.55□□□□□ -0.88
PACRG-201ENST00000337019 TRPV6Q9H1D0 765 aa9.55□□□□□ -0.88
PACRG-201ENST00000337019 SH2B1Q9NRF2 756 aaPredicted RBP9.55□□□□□ -0.88
PACRG-201ENST00000337019 BAZ2BQ9UIF8 2168 aaKnown RBP9.54□□□□□ -0.88
PACRG-201ENST00000337019 SPATA31C2B4DYI2 1134 aa9.54□□□□□ -0.88
PACRG-201ENST00000337019 MAFGO15525 162 aa9.54□□□□□ -0.88
PACRG-201ENST00000337019 STX6O43752 255 aa9.54□□□□□ -0.88
PACRG-201ENST00000337019 RGS20O76081 388 aa9.54□□□□□ -0.88
PACRG-201ENST00000337019 CD4P01730 458 aa9.54□□□□□ -0.88
PACRG-201ENST00000337019 HMGN5P82970 282 aaKnown RBP9.54□□□□□ -0.88
PACRG-201ENST00000337019 KIAA0753Q2KHM9 967 aa9.54□□□□□ -0.88
PACRG-201ENST00000337019 JAKMIP3Q5VZ66 844 aa9.54□□□□□ -0.88
PACRG-201ENST00000337019 PGBD1Q96JS3 809 aa9.54□□□□□ -0.88
PACRG-201ENST00000337019 PRIMPOLQ96LW4 560 aa9.54□□□□□ -0.88
PACRG-201ENST00000337019 PKD2L1Q9P0L9 805 aa9.54□□□□□ -0.88
PACRG-201ENST00000337019 SMC3Q9UQE7 1217 aa9.54□□□□□ -0.88
PACRG-201ENST00000337019 PPFIA3O75145 1194 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 F13A1P00488 732 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 F2P00734 622 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 LGALS2P05162 132 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 CYP2C18P33260 490 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 SREBF1P36956 1147 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 ARHGAP4P98171 946 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 SETQ01105 290 aaPredicted RBP9.53□□□□□ -0.88
PACRG-201ENST00000337019 PTGISQ16647 500 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 HSDL1Q3SXM5 330 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 LRIT3Q3SXY7 679 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 TYW1BQ6NUM6 668 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 RPUSD2Q8IZ73 545 aaKnown RBP9.53□□□□□ -0.88
PACRG-201ENST00000337019 FAM177A1Q8N128 213 aaPredicted RBP9.53□□□□□ -0.88
PACRG-201ENST00000337019 RNF214Q8ND24 703 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 WASF1Q92558 559 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 MXRA8Q9BRK3 442 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 LARP6Q9BRS8 491 aaKnown RBP9.53□□□□□ -0.88
PACRG-201ENST00000337019 ZMYND12Q9H0C1 365 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 JADE2Q9NQC1 790 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 SH3GLB2Q9NR46 395 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 TRMT13Q9NUP7 481 aaKnown RBP9.53□□□□□ -0.88
PACRG-201ENST00000337019 VPS54Q9P1Q0 977 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 UBIAD1Q9Y5Z9 338 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.53□□□□□ -0.88
PACRG-201ENST00000337019 CEP290O15078 2479 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 GRIN2DO15399 1336 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 GADD45BO75293 160 aaPredicted RBP9.53□□□□□ -0.88
PACRG-201ENST00000337019 GNAT1P11488 350 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 CYP2C9P11712 490 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 AK2P54819 239 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 CCL23P55773 120 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 CEP55Q53EZ4 464 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 UTP14CQ5TAP6 766 aaKnown RBP9.53□□□□□ -0.88
PACRG-201ENST00000337019 CAGE1Q8TC20 777 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 NOC4LQ9BVI4 516 aaKnown RBP9.53□□□□□ -0.88
PACRG-201ENST00000337019 AZI2Q9H6S1 392 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 BRMS1Q9HCU9 246 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 JPH1Q9HDC5 661 aaPredicted RBP9.53□□□□□ -0.88
PACRG-201ENST00000337019 TMEM260Q9NX78 707 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 GTF2IRD1Q9UHL9 959 aa9.53□□□□□ -0.88
PACRG-201ENST00000337019 C17orf102A2RUQ5 167 aa9.52□□□□□ -0.89
PACRG-201ENST00000337019 H3BRB1 525 aa9.52□□□□□ -0.89
PACRG-201ENST00000337019 PITPNM1O00562 1244 aa9.52□□□□□ -0.89
PACRG-201ENST00000337019 PFKFB2O60825 505 aa9.52□□□□□ -0.89
PACRG-201ENST00000337019 PFKMP08237 780 aa9.52□□□□□ -0.89
PACRG-201ENST00000337019 HOXD8P13378 290 aaPredicted RBP9.52□□□□□ -0.89
PACRG-201ENST00000337019 CSF2RAP15509 400 aa9.52□□□□□ -0.89
PACRG-201ENST00000337019 ITGB5P18084 799 aa9.52□□□□□ -0.89
PACRG-201ENST00000337019 SYT1P21579 422 aa9.52□□□□□ -0.89
PACRG-201ENST00000337019 ITGB8P26012 769 aa9.52□□□□□ -0.89
PACRG-201ENST00000337019 SP2Q02086 613 aa9.52□□□□□ -0.89
PACRG-201ENST00000337019 SEMA3FQ13275 785 aa9.52□□□□□ -0.89
PACRG-201ENST00000337019 SHHQ15465 462 aa9.52□□□□□ -0.89
PACRG-201ENST00000337019 NTRK3Q16288 839 aa9.52□□□□□ -0.89
PACRG-201ENST00000337019 PKN1Q16512 942 aa9.52□□□□□ -0.89
PACRG-201ENST00000337019 GALNT17Q6IS24 598 aa9.52□□□□□ -0.89
PACRG-201ENST00000337019 SESTD1Q86VW0 696 aa9.52□□□□□ -0.89
PACRG-201ENST00000337019 PLA2G4DQ86XP0 818 aa9.52□□□□□ -0.89
PACRG-201ENST00000337019 MYRIPQ8NFW9 859 aa9.52□□□□□ -0.89
PACRG-201ENST00000337019 AFAP1L1Q8TED9 768 aa9.52□□□□□ -0.89
PACRG-201ENST00000337019 KAT2BQ92831 832 aa9.52□□□□□ -0.89
PACRG-201ENST00000337019 GLG1Q92896 1179 aa9.52□□□□□ -0.89
PACRG-201ENST00000337019 CHAMP1Q96JM3 812 aa9.52□□□□□ -0.89
PACRG-201ENST00000337019 GPR20Q99678 358 aa9.52□□□□□ -0.89
PACRG-201ENST00000337019 TUT1Q9H6E5 874 aaKnown RBP9.52□□□□□ -0.89
PACRG-201ENST00000337019 IL23AQ9NPF7 189 aa9.52□□□□□ -0.89
PACRG-201ENST00000337019 KCNH7Q9NS40 1196 aa9.52□□□□□ -0.89
PACRG-201ENST00000337019 SLC9A2Q9UBY0 812 aa9.52□□□□□ -0.89
PACRG-201ENST00000337019 LTBP2Q14767 1821 aa9.52□□□□□ -0.89
PACRG-201ENST00000337019 KIAA1217Q5T5P2 1943 aa9.52□□□□□ -0.89
PACRG-201ENST00000337019 STK36Q9NRP7 1315 aa9.51□□□□□ -0.89
PACRG-201ENST00000337019 ACTN1P12814 892 aa9.51□□□□□ -0.89
PACRG-201ENST00000337019 KCNA2P16389 499 aa9.51□□□□□ -0.89
PACRG-201ENST00000337019 RFC2P35250 354 aa9.51□□□□□ -0.89
PACRG-201ENST00000337019 TCF7P36402 384 aaPredicted RBP9.51□□□□□ -0.89
PACRG-201ENST00000337019 CLK2P49760 499 aaKnown RBP9.51□□□□□ -0.89
PACRG-201ENST00000337019 TRIM29Q14134 588 aa9.51□□□□□ -0.89
PACRG-201ENST00000337019 C9orf50Q5SZB4 431 aa9.51□□□□□ -0.89
PACRG-201ENST00000337019 GDF6Q6KF10 455 aaPredicted RBP9.51□□□□□ -0.89
PACRG-201ENST00000337019 NIPA1Q7RTP0 329 aa9.51□□□□□ -0.89
PACRG-201ENST00000337019 PPP1R13LQ8WUF5 828 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms