RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 KRT27Q7Z3Y8 459 aa9.02□□□□□ -0.97
HPS4-201ENST00000336873 OTUD6BQ8N6M0 293 aa9.02□□□□□ -0.97
HPS4-201ENST00000336873 KIAA0895Q8NCT3 520 aa9.02□□□□□ -0.97
HPS4-201ENST00000336873 SPATA4Q8NEY3 305 aa9.02□□□□□ -0.97
HPS4-201ENST00000336873 KCNK9Q9NPC2 374 aa9.02□□□□□ -0.97
HPS4-201ENST00000336873 RBM12Q9NTZ6 932 aaKnown RBP9.02□□□□□ -0.97
HPS4-201ENST00000336873 MYO1CO00159 1063 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 PDE2AO00408 941 aaPredicted RBP9.01□□□□□ -0.97
HPS4-201ENST00000336873 GLI3P10071 1580 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 KLRC1P26715 233 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 BIRC3Q13489 604 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 LRCH2Q5VUJ6 765 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 CDKAL1Q5VV42 579 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 ALKBH5Q6P6C2 394 aaKnown RBP9.01□□□□□ -0.97
HPS4-201ENST00000336873 EEPD1Q7L9B9 569 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 THOC1Q96FV9 657 aaKnown RBP9.01□□□□□ -0.97
HPS4-201ENST00000336873 OSBPL9Q96SU4 736 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 THAP9Q9H5L6 903 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 DDX4Q9NQI0 724 aaKnown RBP9.01□□□□□ -0.97
HPS4-201ENST00000336873 LCMT1Q9UIC8 334 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 RABGAP1Q9Y3P9 1069 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 SEMA3EO15041 775 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 NF2P35240 595 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 CARSP49589 748 aaKnown RBP9.01□□□□□ -0.97
HPS4-201ENST00000336873 FUT2Q10981 343 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 TBX2Q13207 712 aaPredicted RBP9.01□□□□□ -0.97
HPS4-201ENST00000336873 BEND6Q5SZJ8 279 aaPredicted RBP9.01□□□□□ -0.97
HPS4-201ENST00000336873 GLYCTKQ8IVS8 523 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 GIMAP8Q8ND71 665 aaPredicted RBP9.01□□□□□ -0.97
HPS4-201ENST00000336873 NEDD1Q8NHV4 660 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 TBC1D22AQ8WUA7 517 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 SPIRE2Q8WWL2 714 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 FAM84AQ96KN4 292 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 CCDC114Q96M63 670 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 LRRC27Q9C0I9 530 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 FBXO28Q9NVF7 368 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 ARHGAP20Q9P2F6 1191 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 CAPN11Q9UMQ6 739 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 USP20Q9Y2K6 914 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 LMO7Q8WWI1 1683 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 EIF2AK2P19525 551 aaKnown RBP9.01□□□□□ -0.97
HPS4-201ENST00000336873 STAT1P42224 750 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 CASP4P49662 377 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 PLTPP55058 493 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 HP1BP3Q5SSJ5 553 aaPredicted RBP9.01□□□□□ -0.97
HPS4-201ENST00000336873 TTI2Q6NXR4 508 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 SCLT1Q96NL6 688 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 LZTS2Q9BRK4 669 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 CAPS2Q9BXY5 557 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 FGFBP2Q9BYJ0 223 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 JMJD4Q9H9V9 463 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.01□□□□□ -0.97
HPS4-201ENST00000336873 JRKLQ9Y4A0 524 aa9.01□□□□□ -0.97
HPS4-201ENST00000336873 A0A087X0T9 212 aa9□□□□□ -0.97
HPS4-201ENST00000336873 PNMA6FA0A0J9YX94 578 aa9□□□□□ -0.97
HPS4-201ENST00000336873 OPA1O60313 960 aa9□□□□□ -0.97
HPS4-201ENST00000336873 FAM228BP0C875 321 aa9□□□□□ -0.97
HPS4-201ENST00000336873 MYBP10242 640 aa9□□□□□ -0.97
HPS4-201ENST00000336873 CYP2C19P33261 490 aa9□□□□□ -0.97
HPS4-201ENST00000336873 ECE1P42892 770 aa9□□□□□ -0.97
HPS4-201ENST00000336873 ARHGAP4P98171 946 aa9□□□□□ -0.97
HPS4-201ENST00000336873 GUCY1A3Q02108 690 aa9□□□□□ -0.97
HPS4-201ENST00000336873 CETN1Q12798 172 aa9□□□□□ -0.97
HPS4-201ENST00000336873 GRB10Q13322 594 aa9□□□□□ -0.97
HPS4-201ENST00000336873 TRADDQ15628 312 aa9□□□□□ -0.97
HPS4-201ENST00000336873 LMBRD2Q68DH5 695 aaPredicted RBP9□□□□□ -0.97
HPS4-201ENST00000336873 PPP1R18Q6NYC8 613 aa9□□□□□ -0.97
HPS4-201ENST00000336873 UNC13DQ70J99 1090 aa9□□□□□ -0.97
HPS4-201ENST00000336873 IRF2BP1Q8IU81 584 aa9□□□□□ -0.97
HPS4-201ENST00000336873 IFT20Q8IY31 132 aa9□□□□□ -0.97
HPS4-201ENST00000336873 FAM118BQ9BPY3 351 aa9□□□□□ -0.97
HPS4-201ENST00000336873 AMNQ9BXJ7 453 aa9□□□□□ -0.97
HPS4-201ENST00000336873 TSGA10Q9BZW7 698 aa9□□□□□ -0.97
HPS4-201ENST00000336873 TMOD4Q9NZQ9 345 aa9□□□□□ -0.97
HPS4-201ENST00000336873 AMACRQ9UHK6 382 aa9□□□□□ -0.97
HPS4-201ENST00000336873 TNS2Q63HR2 1409 aa9□□□□□ -0.97
HPS4-201ENST00000336873 K7ENM7 598 aa9□□□□□ -0.97
HPS4-201ENST00000336873 RHOBTB3O94955 611 aa9□□□□□ -0.97
HPS4-201ENST00000336873 VIMP08670 466 aaKnown RBP9□□□□□ -0.97
HPS4-201ENST00000336873 RPL13P26373 211 aaKnown RBP9□□□□□ -0.97
HPS4-201ENST00000336873 RDXP35241 583 aaKnown RBP9□□□□□ -0.97
HPS4-201ENST00000336873 CRKP46108 304 aa9□□□□□ -0.97
HPS4-201ENST00000336873 TNNC1P63316 161 aa9□□□□□ -0.97
HPS4-201ENST00000336873 FAM102BQ5T8I3 360 aa9□□□□□ -0.97
HPS4-201ENST00000336873 OTUD6AQ7L8S5 288 aa9□□□□□ -0.97
HPS4-201ENST00000336873 FBXL16Q8N461 479 aa9□□□□□ -0.97
HPS4-201ENST00000336873 RAD54LQ92698 747 aa9□□□□□ -0.97
HPS4-201ENST00000336873 DUSP9Q99956 384 aaKnown RBP9□□□□□ -0.97
HPS4-201ENST00000336873 CELF4Q9BZC1 486 aaKnown RBP9□□□□□ -0.97
HPS4-201ENST00000336873 GGT7Q9UJ14 662 aa9□□□□□ -0.97
HPS4-201ENST00000336873 LOC102724159A0A0B4J2E5 919 aa9□□□□□ -0.97
HPS4-201ENST00000336873 H0YIN7 160 aa9□□□□□ -0.97
HPS4-201ENST00000336873 ZBTB5O15062 677 aa9□□□□□ -0.97
HPS4-201ENST00000336873 IVLP07476 585 aa9□□□□□ -0.97
HPS4-201ENST00000336873 SRGNP10124 158 aa9□□□□□ -0.97
HPS4-201ENST00000336873 PCP11498 1178 aaKnown RBP9□□□□□ -0.97
HPS4-201ENST00000336873 GCLMP48507 274 aa9□□□□□ -0.97
HPS4-201ENST00000336873 NNTQ13423 1086 aa9□□□□□ -0.97
HPS4-201ENST00000336873 TNIP1Q15025 636 aa9□□□□□ -0.97
HPS4-201ENST00000336873 PWP2Q15269 919 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms