RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 SLC27A3Q5K4L6 730 aa16.39■□□□□ 0.21
UBA1-201ENST00000335972 HHIPL2Q6UWX4 724 aa16.39■□□□□ 0.21
UBA1-201ENST00000335972 PROCA1Q8NCQ7 364 aaPredicted RBP16.39■□□□□ 0.21
UBA1-201ENST00000335972 HNRNPLLQ8WVV9 542 aaKnown RBP16.39■□□□□ 0.21
UBA1-201ENST00000335972 ADAMTS1Q9UHI8 967 aa16.39■□□□□ 0.21
UBA1-201ENST00000335972 A0A1W2PQJ5 194 aa16.39■□□□□ 0.21
UBA1-201ENST00000335972 APBA3O96018 575 aa16.39■□□□□ 0.21
UBA1-201ENST00000335972 ZNF76P36508 570 aa16.39■□□□□ 0.21
UBA1-201ENST00000335972 ZCWPW2Q504Y3 356 aa16.39■□□□□ 0.21
UBA1-201ENST00000335972 CREG2Q8IUH2 290 aa16.39■□□□□ 0.21
UBA1-201ENST00000335972 PKD2L1Q9P0L9 805 aa16.39■□□□□ 0.21
UBA1-201ENST00000335972 MYH4Q9Y623 1939 aa16.39■□□□□ 0.21
UBA1-201ENST00000335972 FGFR1OPO95684 399 aaKnown RBP16.38■□□□□ 0.21
UBA1-201ENST00000335972 SLC9A1P19634 815 aa16.38■□□□□ 0.21
UBA1-201ENST00000335972 NR2F2P24468 414 aa16.38■□□□□ 0.21
UBA1-201ENST00000335972 CTTNQ14247 550 aaKnown RBP16.38■□□□□ 0.21
UBA1-201ENST00000335972 EHBP1Q8NDI1 1231 aa16.38■□□□□ 0.21
UBA1-201ENST00000335972 PRMT6Q96LA8 375 aaPredicted RBP16.38■□□□□ 0.21
UBA1-201ENST00000335972 BHMT2Q9H2M3 363 aa16.38■□□□□ 0.21
UBA1-201ENST00000335972 PI4KBQ9UBF8 816 aa16.38■□□□□ 0.21
UBA1-201ENST00000335972 SNX12Q9UMY4 172 aa16.38■□□□□ 0.21
UBA1-201ENST00000335972 PPP1R2P41236 205 aa16.38■□□□□ 0.21
UBA1-201ENST00000335972 HGSNATQ68CP4 663 aa16.38■□□□□ 0.21
UBA1-201ENST00000335972 CDAN1Q8IWY9 1227 aa16.38■□□□□ 0.21
UBA1-201ENST00000335972 REEP2Q9BRK0 252 aa16.38■□□□□ 0.21
UBA1-201ENST00000335972 DHX36Q9H2U1 1008 aaKnown RBP16.38■□□□□ 0.21
UBA1-201ENST00000335972 PCDHA2Q9Y5H9 948 aa16.38■□□□□ 0.21
UBA1-201ENST00000335972 SPDYE3A6NKU9 549 aa16.38■□□□□ 0.21
UBA1-201ENST00000335972 EML1O00423 815 aa16.38■□□□□ 0.21
UBA1-201ENST00000335972 ONECUT3O60422 494 aaPredicted RBP16.38■□□□□ 0.21
UBA1-201ENST00000335972 CFBP00751 764 aa16.38■□□□□ 0.21
UBA1-201ENST00000335972 GJB7Q6PEY0 223 aa16.38■□□□□ 0.21
UBA1-201ENST00000335972 FBXO11Q86XK2 927 aa16.38■□□□□ 0.21
UBA1-201ENST00000335972 ACER1Q8TDN7 264 aa16.38■□□□□ 0.21
UBA1-201ENST00000335972 FIGNQ5HY92 759 aa16.37■□□□□ 0.21
UBA1-201ENST00000335972 SFMBT2Q5VUG0 894 aa16.37■□□□□ 0.21
UBA1-201ENST00000335972 ZDHHC15Q96MV8 337 aa16.37■□□□□ 0.21
UBA1-201ENST00000335972 OSBPL9Q96SU4 736 aa16.37■□□□□ 0.21
UBA1-201ENST00000335972 RABEP2Q9H5N1 569 aa16.37■□□□□ 0.21
UBA1-201ENST00000335972 KCNMB3Q9NPA1 279 aa16.37■□□□□ 0.21
UBA1-201ENST00000335972 ALDH1B1P30837 517 aa16.37■□□□□ 0.21
UBA1-201ENST00000335972 CASP4P49662 377 aa16.37■□□□□ 0.21
UBA1-201ENST00000335972 ORC2Q13416 577 aaPredicted RBP16.37■□□□□ 0.21
UBA1-201ENST00000335972 KIAA1755Q5JYT7 1200 aa16.37■□□□□ 0.21
UBA1-201ENST00000335972 DACT2Q5SW24 774 aa16.37■□□□□ 0.21
UBA1-201ENST00000335972 CCDC181Q5TID7 509 aa16.37■□□□□ 0.21
UBA1-201ENST00000335972 PPP1R18Q6NYC8 613 aa16.37■□□□□ 0.21
UBA1-201ENST00000335972 NLGN1Q8N2Q7 840 aa16.37■□□□□ 0.21
UBA1-201ENST00000335972 PURBQ96QR8 312 aaKnown RBP16.37■□□□□ 0.21
UBA1-201ENST00000335972 KCNH2Q12809 1159 aa16.37■□□□□ 0.21
UBA1-201ENST00000335972 PLS1Q14651 629 aa16.37■□□□□ 0.21
UBA1-201ENST00000335972 HSP90B2PQ58FF3 399 aa16.37■□□□□ 0.21
UBA1-201ENST00000335972 MASTLQ96GX5 879 aa16.37■□□□□ 0.21
UBA1-201ENST00000335972 RUSC1Q9BVN2 902 aa16.37■□□□□ 0.21
UBA1-201ENST00000335972 AMNQ9BXJ7 453 aa16.37■□□□□ 0.21
UBA1-201ENST00000335972 NT5C3AQ9H0P0 336 aa16.37■□□□□ 0.21
UBA1-201ENST00000335972 A0A087X0T9 212 aa16.36■□□□□ 0.21
UBA1-201ENST00000335972 ESYT3A0FGR9 886 aa16.36■□□□□ 0.21
UBA1-201ENST00000335972 ZSCAN5CA6NGD5 496 aaPredicted RBP16.36■□□□□ 0.21
UBA1-201ENST00000335972 FAM228BP0C875 321 aa16.36■□□□□ 0.21
UBA1-201ENST00000335972 SPATA31C1P0DKV0 1188 aa16.36■□□□□ 0.21
UBA1-201ENST00000335972 SLC12A3P55017 1021 aa16.36■□□□□ 0.21
UBA1-201ENST00000335972 PSMD2Q13200 908 aa16.36■□□□□ 0.21
UBA1-201ENST00000335972 CCDC17Q96LX7 622 aa16.36■□□□□ 0.21
UBA1-201ENST00000335972 CSRNP1Q96S65 589 aa16.36■□□□□ 0.21
UBA1-201ENST00000335972 KCTD10Q9H3F6 313 aa16.36■□□□□ 0.21
UBA1-201ENST00000335972 MSH4O15457 936 aa16.36■□□□□ 0.21
UBA1-201ENST00000335972 EIF3JO75822 258 aaKnown RBP16.36■□□□□ 0.21
UBA1-201ENST00000335972 CKAP4Q07065 602 aaKnown RBP16.36■□□□□ 0.21
UBA1-201ENST00000335972 TRIM58Q8NG06 486 aa16.36■□□□□ 0.21
UBA1-201ENST00000335972 JRKLQ9Y4A0 524 aa16.36■□□□□ 0.21
UBA1-201ENST00000335972 PCDHB13Q9Y5F0 798 aa16.36■□□□□ 0.21
UBA1-201ENST00000335972 GCFC2P16383 781 aaKnown RBP16.36■□□□□ 0.21
UBA1-201ENST00000335972 KLRC1P26715 233 aa16.36■□□□□ 0.21
UBA1-201ENST00000335972 GPS2Q13227 327 aa16.36■□□□□ 0.21
UBA1-201ENST00000335972 GIT2Q14161 759 aa16.36■□□□□ 0.21
UBA1-201ENST00000335972 COBLL1Q53SF7 1204 aa16.36■□□□□ 0.21
UBA1-201ENST00000335972 SYDE2Q5VT97 1194 aa16.36■□□□□ 0.21
UBA1-201ENST00000335972 FOXR1Q6PIV2 292 aa16.36■□□□□ 0.21
UBA1-201ENST00000335972 MAEAQ7L5Y9 396 aa16.36■□□□□ 0.21
UBA1-201ENST00000335972 TPH2Q8IWU9 490 aa16.36■□□□□ 0.21
UBA1-201ENST00000335972 ETNPPLQ8TBG4 499 aa16.36■□□□□ 0.21
UBA1-201ENST00000335972 LRRC27Q9C0I9 530 aa16.36■□□□□ 0.21
UBA1-201ENST00000335972 SUGT1Q9Y2Z0 365 aa16.36■□□□□ 0.21
UBA1-201ENST00000335972 OPLAHO14841 1288 aa16.35■□□□□ 0.21
UBA1-201ENST00000335972 PALMO75781 387 aa16.35■□□□□ 0.21
UBA1-201ENST00000335972 HOXD13P35453 343 aa16.35■□□□□ 0.21
UBA1-201ENST00000335972 PDE6BP35913 854 aa16.35■□□□□ 0.21
UBA1-201ENST00000335972 MIGA2Q7L4E1 593 aa16.35■□□□□ 0.21
UBA1-201ENST00000335972 LENG9Q96B70 501 aa16.35■□□□□ 0.21
UBA1-201ENST00000335972 DNM3Q9UQ16 869 aa16.35■□□□□ 0.21
UBA1-201ENST00000335972 KDM3AQ9Y4C1 1321 aa16.35■□□□□ 0.21
UBA1-201ENST00000335972 GCNT3O95395 438 aa16.35■□□□□ 0.21
UBA1-201ENST00000335972 CAPN2P17655 700 aa16.35■□□□□ 0.21
UBA1-201ENST00000335972 HNRNPH3P31942 346 aaKnown RBP16.35■□□□□ 0.21
UBA1-201ENST00000335972 SPIRE1Q08AE8 756 aa16.35■□□□□ 0.21
UBA1-201ENST00000335972 KLHL30Q0D2K2 578 aa16.35■□□□□ 0.21
UBA1-201ENST00000335972 SLC9C1Q4G0N8 1177 aa16.35■□□□□ 0.21
UBA1-201ENST00000335972 TBC1D10BQ4KMP7 808 aaPredicted RBP16.35■□□□□ 0.21
UBA1-201ENST00000335972 ZC2HC1CQ53FD0 456 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms