RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 DUSP28Q4G0W2 176 aa18.59■□□□□ 0.57
SHOX-201ENST00000334060 ARL6IP4Q66PJ3 421 aaKnown RBP18.59■□□□□ 0.57
SHOX-201ENST00000334060 POTEBQ6S5H4 581 aa18.59■□□□□ 0.57
SHOX-201ENST00000334060 MSL3Q8N5Y2 521 aaKnown RBP18.59■□□□□ 0.57
SHOX-201ENST00000334060 DYDC2Q96IM9 177 aa18.59■□□□□ 0.57
SHOX-201ENST00000334060 PNMA5Q96PV4 448 aa18.59■□□□□ 0.57
SHOX-201ENST00000334060 SLC9A2Q9UBY0 812 aa18.59■□□□□ 0.57
SHOX-201ENST00000334060 LRWD1Q9UFC0 647 aa18.59■□□□□ 0.57
SHOX-201ENST00000334060 PFKFB1P16118 471 aa18.59■□□□□ 0.57
SHOX-201ENST00000334060 PPP2R5CQ13362 524 aa18.59■□□□□ 0.57
SHOX-201ENST00000334060 ORC2Q13416 577 aaPredicted RBP18.59■□□□□ 0.57
SHOX-201ENST00000334060 RESP18Q5W5W9 173 aa18.59■□□□□ 0.57
SHOX-201ENST00000334060 POTEGQ6S5H5 508 aa18.59■□□□□ 0.57
SHOX-201ENST00000334060 SLFN12Q8IYM2 578 aa18.59■□□□□ 0.57
SHOX-201ENST00000334060 PXYLP1Q8TE99 480 aa18.59■□□□□ 0.57
SHOX-201ENST00000334060 RIT2Q99578 217 aa18.59■□□□□ 0.57
SHOX-201ENST00000334060 NAP1L4Q99733 375 aaKnown RBP18.59■□□□□ 0.57
SHOX-201ENST00000334060 LOC102724159A0A0B4J2E5 919 aa18.58■□□□□ 0.56
SHOX-201ENST00000334060 CUTAO60888 179 aa18.58■□□□□ 0.56
SHOX-201ENST00000334060 GNRH1P01148 92 aa18.58■□□□□ 0.56
SHOX-201ENST00000334060 ZNF286BP0CG31 522 aa18.58■□□□□ 0.56
SHOX-201ENST00000334060 GRB10Q13322 594 aa18.58■□□□□ 0.56
SHOX-201ENST00000334060 PWP2Q15269 919 aaKnown RBP18.58■□□□□ 0.56
SHOX-201ENST00000334060 ADALQ6DHV7 355 aa18.58■□□□□ 0.56
SHOX-201ENST00000334060 CTU1Q7Z7A3 348 aaKnown RBP18.58■□□□□ 0.56
SHOX-201ENST00000334060 TLK2Q86UE8 772 aa18.58■□□□□ 0.56
SHOX-201ENST00000334060 CATSPER3Q86XQ3 398 aa18.58■□□□□ 0.56
SHOX-201ENST00000334060 DHX37Q8IY37 1157 aaKnown RBP18.58■□□□□ 0.56
SHOX-201ENST00000334060 FSIP1Q8NA03 581 aa18.58■□□□□ 0.56
SHOX-201ENST00000334060 SPATA33Q96N06 139 aa18.58■□□□□ 0.56
SHOX-201ENST00000334060 MPHOSPH6Q99547 160 aaKnown RBP18.58■□□□□ 0.56
SHOX-201ENST00000334060 GPR20Q99678 358 aa18.58■□□□□ 0.56
SHOX-201ENST00000334060 EIF2AK1Q9BQI3 630 aaKnown RBP18.58■□□□□ 0.56
SHOX-201ENST00000334060 MLXIPQ9HAP2 919 aa18.58■□□□□ 0.56
SHOX-201ENST00000334060 SAMM50Q9Y512 469 aa18.58■□□□□ 0.56
SHOX-201ENST00000334060 LAD1O00515 517 aa18.57■□□□□ 0.56
SHOX-201ENST00000334060 NR1I2O75469 434 aa18.57■□□□□ 0.56
SHOX-201ENST00000334060 MYCNP04198 464 aaPredicted RBP18.57■□□□□ 0.56
SHOX-201ENST00000334060 GRAMD1CQ8IYS0 662 aa18.57■□□□□ 0.56
SHOX-201ENST00000334060 SNX29Q8TEQ0 813 aa18.57■□□□□ 0.56
SHOX-201ENST00000334060 STAMQ92783 540 aa18.57■□□□□ 0.56
SHOX-201ENST00000334060 ERCC4Q92889 916 aaPredicted RBP18.57■□□□□ 0.56
SHOX-201ENST00000334060 FERMT2Q96AC1 680 aa18.57■□□□□ 0.56
SHOX-201ENST00000334060 ZBTB10Q96DT7 871 aa18.57■□□□□ 0.56
SHOX-201ENST00000334060 SENP7Q9BQF6 1050 aa18.57■□□□□ 0.56
SHOX-201ENST00000334060 SDF4Q9BRK5 362 aa18.57■□□□□ 0.56
SHOX-201ENST00000334060 DISC1Q9NRI5 854 aa18.57■□□□□ 0.56
SHOX-201ENST00000334060 NFASCO94856 1347 aa18.57■□□□□ 0.56
SHOX-201ENST00000334060 B4DLN1 442 aa18.57■□□□□ 0.56
SHOX-201ENST00000334060 ZNF862O60290 1169 aa18.57■□□□□ 0.56
SHOX-201ENST00000334060 BMP15O95972 392 aa18.57■□□□□ 0.56
SHOX-201ENST00000334060 ATP4AP20648 1035 aa18.57■□□□□ 0.56
SHOX-201ENST00000334060 CASP1P29466 404 aa18.57■□□□□ 0.56
SHOX-201ENST00000334060 NAALADL2Q58DX5 795 aa18.57■□□□□ 0.56
SHOX-201ENST00000334060 UTP14CQ5TAP6 766 aaKnown RBP18.57■□□□□ 0.56
SHOX-201ENST00000334060 METTL7BQ6UX53 244 aa18.57■□□□□ 0.56
SHOX-201ENST00000334060 MIER3Q7Z3K6 550 aa18.57■□□□□ 0.56
SHOX-201ENST00000334060 ZNF579Q8NAF0 562 aaKnown RBP18.57■□□□□ 0.56
SHOX-201ENST00000334060 SLAIN1Q8ND83 568 aa18.57■□□□□ 0.56
SHOX-201ENST00000334060 OR6J1Q8NGC5 347 aa18.57■□□□□ 0.56
SHOX-201ENST00000334060 SYNRGQ9UMZ2 1314 aa18.56■□□□□ 0.56
SHOX-201ENST00000334060 MAFGO15525 162 aa18.56■□□□□ 0.56
SHOX-201ENST00000334060 SLITRK3O94933 977 aa18.56■□□□□ 0.56
SHOX-201ENST00000334060 TCF7P36402 384 aaPredicted RBP18.56■□□□□ 0.56
SHOX-201ENST00000334060 SNW1Q13573 536 aaKnown RBP18.56■□□□□ 0.56
SHOX-201ENST00000334060 SWSAP1Q6NVH7 229 aa18.56■□□□□ 0.56
SHOX-201ENST00000334060 ABHD15Q6UXT9 468 aa18.56■□□□□ 0.56
SHOX-201ENST00000334060 POLD4Q9HCU8 107 aa18.56■□□□□ 0.56
SHOX-201ENST00000334060 TBC1D22BQ9NU19 505 aa18.56■□□□□ 0.56
SHOX-201ENST00000334060 HPSEQ9Y251 543 aa18.56■□□□□ 0.56
SHOX-201ENST00000334060 SEPT4O43236 478 aa18.55■□□□□ 0.56
SHOX-201ENST00000334060 TGFB3P10600 412 aa18.55■□□□□ 0.56
SHOX-201ENST00000334060 AKR1A1P14550 325 aa18.55■□□□□ 0.56
SHOX-201ENST00000334060 MARK3P27448 753 aa18.55■□□□□ 0.56
SHOX-201ENST00000334060 LONP1P36776 959 aaKnown RBP18.55■□□□□ 0.56
SHOX-201ENST00000334060 SLC9C1Q4G0N8 1177 aa18.55■□□□□ 0.56
SHOX-201ENST00000334060 IQSEC1Q6DN90 963 aa18.55■□□□□ 0.56
SHOX-201ENST00000334060 CABP7Q86V35 215 aa18.55■□□□□ 0.56
SHOX-201ENST00000334060 PIGOQ8TEQ8 1089 aa18.55■□□□□ 0.56
SHOX-201ENST00000334060 CDHR1Q96JP9 859 aa18.55■□□□□ 0.56
SHOX-201ENST00000334060 HSD17B14Q9BPX1 270 aa18.55■□□□□ 0.56
SHOX-201ENST00000334060 GABBR1Q9UBS5 961 aa18.55■□□□□ 0.56
SHOX-201ENST00000334060 FAM184BQ9ULE4 1060 aa18.55■□□□□ 0.56
SHOX-201ENST00000334060 MORC2Q9Y6X9 1032 aaPredicted RBP18.55■□□□□ 0.56
SHOX-201ENST00000334060 E9PMD0 336 aa18.55■□□□□ 0.56
SHOX-201ENST00000334060 GH1P01241 217 aa18.55■□□□□ 0.56
SHOX-201ENST00000334060 PLCG1P19174 1290 aa18.55■□□□□ 0.56
SHOX-201ENST00000334060 NEDD9Q14511 834 aa18.55■□□□□ 0.56
SHOX-201ENST00000334060 TMEM266Q2M3C6 531 aa18.55■□□□□ 0.56
SHOX-201ENST00000334060 L1TD1Q5T7N2 865 aaKnown RBP18.55■□□□□ 0.56
SHOX-201ENST00000334060 LHX8Q68G74 356 aa18.55■□□□□ 0.56
SHOX-201ENST00000334060 TPH2Q8IWU9 490 aa18.55■□□□□ 0.56
SHOX-201ENST00000334060 ENGASEQ8NFI3 743 aa18.55■□□□□ 0.56
SHOX-201ENST00000334060 LXNQ9BS40 222 aa18.55■□□□□ 0.56
SHOX-201ENST00000334060 PCDH10Q9P2E7 1040 aa18.55■□□□□ 0.56
SHOX-201ENST00000334060 WDR81Q562E7 1941 aa18.54■□□□□ 0.56
SHOX-201ENST00000334060 POLR2DO15514 142 aaKnown RBP18.54■□□□□ 0.56
SHOX-201ENST00000334060 MMP3P08254 477 aa18.54■□□□□ 0.56
SHOX-201ENST00000334060 CMA1P23946 247 aa18.54■□□□□ 0.56
SHOX-201ENST00000334060 CCT6AP40227 531 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms