RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 CAP1Q01518 475 aa5.53□□□□□ -1.52
SKP1-201ENST00000328392 PAK1Q13153 545 aa5.53□□□□□ -1.52
SKP1-201ENST00000328392 STEAP3Q658P3 488 aa5.53□□□□□ -1.52
SKP1-201ENST00000328392 LIPIQ6XZB0 460 aa5.53□□□□□ -1.52
SKP1-201ENST00000328392 CISD2Q8N5K1 135 aaKnown RBP5.53□□□□□ -1.52
SKP1-201ENST00000328392 ARRDC4Q8NCT1 418 aa5.53□□□□□ -1.52
SKP1-201ENST00000328392 PCDH19Q8TAB3 1148 aa5.53□□□□□ -1.52
SKP1-201ENST00000328392 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.53□□□□□ -1.52
SKP1-201ENST00000328392 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.53□□□□□ -1.52
SKP1-201ENST00000328392 CHAC2Q8WUX2 184 aa5.53□□□□□ -1.52
SKP1-201ENST00000328392 SPATA25Q9BR10 227 aa5.53□□□□□ -1.52
SKP1-201ENST00000328392 ADAM7Q9H2U9 754 aa5.53□□□□□ -1.52
SKP1-201ENST00000328392 CATSPERZQ9NTU4 200 aa5.53□□□□□ -1.52
SKP1-201ENST00000328392 SAMD15Q9P1V8 674 aa5.53□□□□□ -1.52
SKP1-201ENST00000328392 SH3D21A4FU49 640 aa5.52□□□□□ -1.53
SKP1-201ENST00000328392 HGSO14964 777 aaPredicted RBP5.52□□□□□ -1.53
SKP1-201ENST00000328392 TADA3O75528 432 aa5.52□□□□□ -1.53
SKP1-201ENST00000328392 ASLP04424 464 aa5.52□□□□□ -1.53
SKP1-201ENST00000328392 CYP2C8P10632 490 aa5.52□□□□□ -1.53
SKP1-201ENST00000328392 GRK2P25098 689 aa5.52□□□□□ -1.53
SKP1-201ENST00000328392 GRK3P35626 688 aa5.52□□□□□ -1.53
SKP1-201ENST00000328392 EVA1CP58658 441 aa5.52□□□□□ -1.53
SKP1-201ENST00000328392 ST5P78524 1137 aa5.52□□□□□ -1.53
SKP1-201ENST00000328392 STRN3Q13033 797 aa5.52□□□□□ -1.53
SKP1-201ENST00000328392 KIZQ2M2Z5 673 aa5.52□□□□□ -1.53
SKP1-201ENST00000328392 CR1LQ2VPA4 569 aa5.52□□□□□ -1.53
SKP1-201ENST00000328392 PKN3Q6P5Z2 889 aa5.52□□□□□ -1.53
SKP1-201ENST00000328392 RSPO2Q6UXX9 243 aaPredicted RBP5.52□□□□□ -1.53
SKP1-201ENST00000328392 THNSL2Q86YJ6 484 aa5.52□□□□□ -1.53
SKP1-201ENST00000328392 FAM126BQ8IXS8 530 aa5.52□□□□□ -1.53
SKP1-201ENST00000328392 RBM12BQ8IXT5 1001 aaKnown RBP5.52□□□□□ -1.53
SKP1-201ENST00000328392 DDX1Q92499 740 aaKnown RBP5.52□□□□□ -1.53
SKP1-201ENST00000328392 C11orf84Q9BUA3 381 aaPredicted RBP5.52□□□□□ -1.53
SKP1-201ENST00000328392 PCDH12Q9NPG4 1184 aa5.52□□□□□ -1.53
SKP1-201ENST00000328392 LUC7LQ9NQ29 371 aaKnown RBP5.52□□□□□ -1.53
SKP1-201ENST00000328392 RAPGEFL1Q9UHV5 662 aa5.52□□□□□ -1.53
SKP1-201ENST00000328392 TCRBV5S2A0A599 114 aa5.51□□□□□ -1.53
SKP1-201ENST00000328392 CCDC66A2RUB6 948 aa5.51□□□□□ -1.53
SKP1-201ENST00000328392 GSG1L2A8MUP6 293 aa5.51□□□□□ -1.53
SKP1-201ENST00000328392 KCNQ2O43526 872 aa5.51□□□□□ -1.53
SKP1-201ENST00000328392 GLRX3O76003 335 aaKnown RBP5.51□□□□□ -1.53
SKP1-201ENST00000328392 KRT37O76014 449 aa5.51□□□□□ -1.53
SKP1-201ENST00000328392 FLT3P36888 993 aa5.51□□□□□ -1.53
SKP1-201ENST00000328392 STAT3P40763 770 aa5.51□□□□□ -1.53
SKP1-201ENST00000328392 KCNC1P48547 511 aa5.51□□□□□ -1.53
SKP1-201ENST00000328392 ANAPC15P60006 121 aa5.51□□□□□ -1.53
SKP1-201ENST00000328392 AMPD3Q01432 767 aa5.51□□□□□ -1.53
SKP1-201ENST00000328392 CDCA2Q69YH5 1023 aaPredicted RBP5.51□□□□□ -1.53
SKP1-201ENST00000328392 ZCCHC8Q6NZY4 707 aaKnown RBP5.51□□□□□ -1.53
SKP1-201ENST00000328392 UBE2R2Q712K3 238 aaPredicted RBP5.51□□□□□ -1.53
SKP1-201ENST00000328392 STRA8Q7Z7C7 330 aa5.51□□□□□ -1.53
SKP1-201ENST00000328392 SP8Q8IXZ3 490 aa5.51□□□□□ -1.53
SKP1-201ENST00000328392 NXPE1Q8N323 547 aa5.51□□□□□ -1.53
SKP1-201ENST00000328392 LINC00482Q8N8I6 264 aa5.51□□□□□ -1.53
SKP1-201ENST00000328392 PIP4K2CQ8TBX8 421 aa5.51□□□□□ -1.53
SKP1-201ENST00000328392 WNK4Q96J92 1243 aa5.51□□□□□ -1.53
SKP1-201ENST00000328392 PUS7Q96PZ0 661 aaKnown RBP5.51□□□□□ -1.53
SKP1-201ENST00000328392 ZFYVE21Q9BQ24 234 aa5.51□□□□□ -1.53
SKP1-201ENST00000328392 KRTAP4-7Q9BYR0 210 aa5.51□□□□□ -1.53
SKP1-201ENST00000328392 EPB41L1Q9H4G0 881 aa5.51□□□□□ -1.53
SKP1-201ENST00000328392 CAAP1Q9H8G2 361 aa5.51□□□□□ -1.53
SKP1-201ENST00000328392 ZNF652Q9Y2D9 606 aa5.51□□□□□ -1.53
SKP1-201ENST00000328392 PCDHB4Q9Y5E5 795 aa5.51□□□□□ -1.53
SKP1-201ENST00000328392 FAM83GA6ND36 823 aa5.5□□□□□ -1.53
SKP1-201ENST00000328392 FAM47E-STBD1D6RA91 191 aa5.5□□□□□ -1.53
SKP1-201ENST00000328392 M0R2C6 588 aa5.5□□□□□ -1.53
SKP1-201ENST00000328392 ARVCFO00192 962 aa5.5□□□□□ -1.53
SKP1-201ENST00000328392 DGKIO75912 1065 aa5.5□□□□□ -1.53
SKP1-201ENST00000328392 GNAT1P11488 350 aa5.5□□□□□ -1.53
SKP1-201ENST00000328392 ITGA1P56199 1179 aa5.5□□□□□ -1.53
SKP1-201ENST00000328392 IGBP1P78318 339 aa5.5□□□□□ -1.53
SKP1-201ENST00000328392 RBM10P98175 930 aaKnown RBP5.5□□□□□ -1.53
SKP1-201ENST00000328392 NFKB2Q00653 900 aa5.5□□□□□ -1.53
SKP1-201ENST00000328392 FAM50AQ14320 339 aaKnown RBP5.5□□□□□ -1.53
SKP1-201ENST00000328392 SEPT7Q16181 437 aaKnown RBP5.5□□□□□ -1.53
SKP1-201ENST00000328392 EMC4Q5J8M3 183 aa5.5□□□□□ -1.53
SKP1-201ENST00000328392 RNF180Q86T96 592 aa5.5□□□□□ -1.53
SKP1-201ENST00000328392 DDX53Q86TM3 631 aaKnown RBP5.5□□□□□ -1.53
SKP1-201ENST00000328392 CARFQ8N187 725 aa5.5□□□□□ -1.53
SKP1-201ENST00000328392 ZCRB1Q8TBF4 217 aaKnown RBP5.5□□□□□ -1.53
SKP1-201ENST00000328392 FBXW5Q969U6 566 aa5.5□□□□□ -1.53
SKP1-201ENST00000328392 INTS7Q9NVH2 962 aaKnown RBP5.5□□□□□ -1.53
SKP1-201ENST00000328392 CBLCQ9ULV8 474 aa5.5□□□□□ -1.53
SKP1-201ENST00000328392 WASF3Q9UPY6 502 aa5.5□□□□□ -1.53
SKP1-201ENST00000328392 ZNF891A8MT65 544 aaPredicted RBP5.49□□□□□ -1.53
SKP1-201ENST00000328392 SLC27A2O14975 620 aa5.49□□□□□ -1.53
SKP1-201ENST00000328392 PDE6AP16499 860 aa5.49□□□□□ -1.53
SKP1-201ENST00000328392 KCNA6P17658 529 aa5.49□□□□□ -1.53
SKP1-201ENST00000328392 NAT1P18440 290 aa5.49□□□□□ -1.53
SKP1-201ENST00000328392 SOX5P35711 763 aa5.49□□□□□ -1.53
SKP1-201ENST00000328392 NFIXQ14938 502 aa5.49□□□□□ -1.53
SKP1-201ENST00000328392 FAM47CQ5HY64 1035 aa5.49□□□□□ -1.53
SKP1-201ENST00000328392 NT5DC1Q5TFE4 455 aa5.49□□□□□ -1.53
SKP1-201ENST00000328392 OSTM1Q86WC4 334 aa5.49□□□□□ -1.53
SKP1-201ENST00000328392 ANKRD13AQ8IZ07 590 aa5.49□□□□□ -1.53
SKP1-201ENST00000328392 PPM1KQ8N3J5 372 aa5.49□□□□□ -1.53
SKP1-201ENST00000328392 ATL2Q8NHH9 583 aa5.49□□□□□ -1.53
SKP1-201ENST00000328392 RELTQ969Z4 430 aa5.49□□□□□ -1.53
SKP1-201ENST00000328392 YIPF4Q9BSR8 244 aa5.49□□□□□ -1.53
SKP1-201ENST00000328392 MTFR1LQ9H019 292 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms