RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 SRGAP1Q7Z6B7 1085 aa12.94□□□□□ -0.34
DDR1-223ENST00000324771 PLVAPQ9BX97 442 aa12.94□□□□□ -0.34
DDR1-223ENST00000324771 WDR11Q9BZH6 1224 aa12.94□□□□□ -0.34
DDR1-223ENST00000324771 ZMYND12Q9H0C1 365 aa12.94□□□□□ -0.34
DDR1-223ENST00000324771 FZD1Q9UP38 647 aa12.94□□□□□ -0.34
DDR1-223ENST00000324771 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.94□□□□□ -0.34
DDR1-223ENST00000324771 POLRMTO00411 1230 aaKnown RBP12.94□□□□□ -0.34
DDR1-223ENST00000324771 CLCN6P51797 869 aa12.94□□□□□ -0.34
DDR1-223ENST00000324771 TTC19Q6DKK2 380 aaPredicted RBP12.94□□□□□ -0.34
DDR1-223ENST00000324771 PACSIN2Q9UNF0 486 aaPredicted RBP12.94□□□□□ -0.34
DDR1-223ENST00000324771 HPSEQ9Y251 543 aa12.94□□□□□ -0.34
DDR1-223ENST00000324771 hCG_1984214I3L0E3 225 aa12.94□□□□□ -0.34
DDR1-223ENST00000324771 DESP17661 470 aa12.94□□□□□ -0.34
DDR1-223ENST00000324771 KCNH2Q12809 1159 aa12.94□□□□□ -0.34
DDR1-223ENST00000324771 SLC15A2Q16348 729 aa12.94□□□□□ -0.34
DDR1-223ENST00000324771 SHROOM1Q2M3G4 852 aaPredicted RBP12.94□□□□□ -0.34
DDR1-223ENST00000324771 Q3C1V9 767 aa12.94□□□□□ -0.34
DDR1-223ENST00000324771 RAD9BQ6WBX8 426 aa12.94□□□□□ -0.34
DDR1-223ENST00000324771 ZNF713Q8N859 430 aaPredicted RBP12.94□□□□□ -0.34
DDR1-223ENST00000324771 AGBL1Q96MI9 1066 aa12.94□□□□□ -0.34
DDR1-223ENST00000324771 BPIFA3Q9BQP9 254 aa12.94□□□□□ -0.34
DDR1-223ENST00000324771 ZNF70Q9UC06 446 aaPredicted RBP12.94□□□□□ -0.34
DDR1-223ENST00000324771 SALL1Q9NSC2 1324 aa12.94□□□□□ -0.34
DDR1-223ENST00000324771 INO80B-WBP1J3KQ70 363 aa12.94□□□□□ -0.34
DDR1-223ENST00000324771 GCLMP48507 274 aa12.94□□□□□ -0.34
DDR1-223ENST00000324771 MTMR1Q13613 665 aa12.94□□□□□ -0.34
DDR1-223ENST00000324771 MTMR2Q13614 643 aa12.94□□□□□ -0.34
DDR1-223ENST00000324771 MICALL2Q8IY33 904 aa12.94□□□□□ -0.34
DDR1-223ENST00000324771 PANX2Q96RD6 677 aa12.94□□□□□ -0.34
DDR1-223ENST00000324771 INO80BQ9C086 356 aaPredicted RBP12.94□□□□□ -0.34
DDR1-223ENST00000324771 CCSER1Q9C0I3 900 aa12.94□□□□□ -0.34
DDR1-223ENST00000324771 METTL14Q9HCE5 456 aaKnown RBP12.94□□□□□ -0.34
DDR1-223ENST00000324771 PDE11AQ9HCR9 933 aa12.94□□□□□ -0.34
DDR1-223ENST00000324771 RNF146Q9NTX7 359 aa12.94□□□□□ -0.34
DDR1-223ENST00000324771 SLC16A4O15374 487 aa12.93□□□□□ -0.34
DDR1-223ENST00000324771 NCK2O43639 380 aa12.93□□□□□ -0.34
DDR1-223ENST00000324771 SRGAP2CP0DJJ0 459 aa12.93□□□□□ -0.34
DDR1-223ENST00000324771 PSMC2P35998 433 aaKnown RBP12.93□□□□□ -0.34
DDR1-223ENST00000324771 GUCY2DQ02846 1103 aa12.93□□□□□ -0.34
DDR1-223ENST00000324771 DPY19L2Q6NUT2 758 aa12.93□□□□□ -0.34
DDR1-223ENST00000324771 DCUN1D2Q6PH85 259 aa12.93□□□□□ -0.34
DDR1-223ENST00000324771 ADSSL1Q8N142 457 aa12.93□□□□□ -0.34
DDR1-223ENST00000324771 KRT12Q99456 494 aa12.93□□□□□ -0.34
DDR1-223ENST00000324771 UBE2TQ9NPD8 197 aaPredicted RBP12.93□□□□□ -0.34
DDR1-223ENST00000324771 KMT5AQ9NQR1 393 aa12.93□□□□□ -0.34
DDR1-223ENST00000324771 ADD3Q9UEY8 706 aaKnown RBP12.93□□□□□ -0.34
DDR1-223ENST00000324771 IRX5P78411 483 aaPredicted RBP12.93□□□□□ -0.34
DDR1-223ENST00000324771 MAP2K1Q02750 393 aaPredicted RBP12.93□□□□□ -0.34
DDR1-223ENST00000324771 SEL1L2Q5TEA6 688 aa12.93□□□□□ -0.34
DDR1-223ENST00000324771 PDXDC2PQ6P474 469 aa12.93□□□□□ -0.34
DDR1-223ENST00000324771 HHIPL2Q6UWX4 724 aa12.93□□□□□ -0.34
DDR1-223ENST00000324771 ZBTB33Q86T24 672 aa12.93□□□□□ -0.34
DDR1-223ENST00000324771 TC2NQ8N9U0 490 aa12.93□□□□□ -0.34
DDR1-223ENST00000324771 CYP2W1Q8TAV3 490 aa12.93□□□□□ -0.34
DDR1-223ENST00000324771 EIF2AK1Q9BQI3 630 aaKnown RBP12.93□□□□□ -0.34
DDR1-223ENST00000324771 CNOT7Q9UIV1 285 aaKnown RBP12.93□□□□□ -0.34
DDR1-223ENST00000324771 KRIT1O00522 736 aa12.93□□□□□ -0.34
DDR1-223ENST00000324771 MYL7Q01449 175 aa12.93□□□□□ -0.34
DDR1-223ENST00000324771 LONRF2Q1L5Z9 754 aa12.93□□□□□ -0.34
DDR1-223ENST00000324771 KCTD16Q68DU8 428 aa12.93□□□□□ -0.34
DDR1-223ENST00000324771 CYFIP1Q7L576 1253 aa12.93□□□□□ -0.34
DDR1-223ENST00000324771 GSPT2Q8IYD1 628 aaKnown RBP12.93□□□□□ -0.34
DDR1-223ENST00000324771 KIFAP3Q92845 792 aa12.93□□□□□ -0.34
DDR1-223ENST00000324771 ZCCHC17Q9NP64 241 aaKnown RBP12.93□□□□□ -0.34
DDR1-223ENST00000324771 ZNRF3Q9ULT6 936 aa12.93□□□□□ -0.34
DDR1-223ENST00000324771 TACC3Q9Y6A5 838 aa12.93□□□□□ -0.34
DDR1-223ENST00000324771 ACTN2P35609 894 aa12.92□□□□□ -0.34
DDR1-223ENST00000324771 NBPF9Q3BBW0 867 aa12.92□□□□□ -0.34
DDR1-223ENST00000324771 ZNF746Q6NUN9 644 aaPredicted RBP12.92□□□□□ -0.34
DDR1-223ENST00000324771 PADI6Q6TGC4 694 aa12.92□□□□□ -0.34
DDR1-223ENST00000324771 CCDC105Q8IYK2 499 aa12.92□□□□□ -0.34
DDR1-223ENST00000324771 ASIC3Q9UHC3 531 aa12.92□□□□□ -0.34
DDR1-223ENST00000324771 PCDHA13Q9Y5I0 950 aa12.92□□□□□ -0.34
DDR1-223ENST00000324771 GOLGA6BA6NDN3 693 aa12.92□□□□□ -0.34
DDR1-223ENST00000324771 PPP1R3GB7ZBB8 358 aa12.92□□□□□ -0.34
DDR1-223ENST00000324771 IFNB1P01574 187 aa12.92□□□□□ -0.34
DDR1-223ENST00000324771 ACTN1P12814 892 aa12.92□□□□□ -0.34
DDR1-223ENST00000324771 NCAPHQ15003 741 aa12.92□□□□□ -0.34
DDR1-223ENST00000324771 ZC2HC1CQ53FD0 456 aaPredicted RBP12.92□□□□□ -0.34
DDR1-223ENST00000324771 ZNF394Q53GI3 561 aa12.92□□□□□ -0.34
DDR1-223ENST00000324771 CERS5Q8N5B7 392 aa12.92□□□□□ -0.34
DDR1-223ENST00000324771 AMFRQ9UKV5 643 aa12.92□□□□□ -0.34
DDR1-223ENST00000324771 CEP83Q9Y592 693 aa12.92□□□□□ -0.34
DDR1-223ENST00000324771 TCHHQ07283 1943 aa12.92□□□□□ -0.34
DDR1-223ENST00000324771 MYL1P05976 194 aa12.92□□□□□ -0.34
DDR1-223ENST00000324771 GBP2P32456 591 aaPredicted RBP12.92□□□□□ -0.34
DDR1-223ENST00000324771 ATP1A2P50993 1020 aa12.92□□□□□ -0.34
DDR1-223ENST00000324771 AP3B2Q13367 1082 aa12.92□□□□□ -0.34
DDR1-223ENST00000324771 WHAMMP3Q1A5X7 153 aa12.92□□□□□ -0.34
DDR1-223ENST00000324771 CAPN12Q6ZSI9 719 aa12.92□□□□□ -0.34
DDR1-223ENST00000324771 RNF169Q8NCN4 708 aa12.92□□□□□ -0.34
DDR1-223ENST00000324771 SAAL1Q96ER3 474 aa12.92□□□□□ -0.34
DDR1-223ENST00000324771 LXNQ9BS40 222 aa12.92□□□□□ -0.34
DDR1-223ENST00000324771 APOL6Q9BWW8 343 aa12.92□□□□□ -0.34
DDR1-223ENST00000324771 PRDM4Q9UKN5 801 aa12.92□□□□□ -0.34
DDR1-223ENST00000324771 NR3C1P04150 777 aa12.91□□□□□ -0.34
DDR1-223ENST00000324771 TMOD1P28289 359 aa12.91□□□□□ -0.34
DDR1-223ENST00000324771 PRPHP41219 470 aa12.91□□□□□ -0.34
DDR1-223ENST00000324771 LRRC63Q05C16 580 aa12.91□□□□□ -0.34
DDR1-223ENST00000324771 CALCOCO2Q13137 446 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms