RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 TRIM15Q9C019 465 aa22.7■■□□□ 1.22
RNF40-201ENST00000324685 NOVA2Q9UNW9 492 aaKnown RBP22.7■■□□□ 1.22
RNF40-201ENST00000324685 DYNLT1P63172 113 aa22.7■■□□□ 1.22
RNF40-201ENST00000324685 TMC4Q7Z404 712 aa22.7■■□□□ 1.22
RNF40-201ENST00000324685 FMO2Q99518 471 aa22.7■■□□□ 1.22
RNF40-201ENST00000324685 ARHGEF37A1IGU5 675 aa22.69■■□□□ 1.22
RNF40-201ENST00000324685 PRPSAP2O60256 369 aa22.69■■□□□ 1.22
RNF40-201ENST00000324685 PCIF1Q9H4Z3 704 aa22.69■■□□□ 1.22
RNF40-201ENST00000324685 E2F5Q15329 346 aa22.69■■□□□ 1.22
RNF40-201ENST00000324685 SPOPLQ6IQ16 392 aa22.69■■□□□ 1.22
RNF40-201ENST00000324685 PLS3P13797 630 aa22.69■■□□□ 1.22
RNF40-201ENST00000324685 LRRC63Q05C16 580 aa22.69■■□□□ 1.22
RNF40-201ENST00000324685 CFAP36Q96G28 342 aa22.69■■□□□ 1.22
RNF40-201ENST00000324685 PIGSQ96S52 555 aa22.69■■□□□ 1.22
RNF40-201ENST00000324685 KANSL2Q9H9L4 492 aa22.69■■□□□ 1.22
RNF40-201ENST00000324685 CPSF3Q9UKF6 684 aaKnown RBP22.69■■□□□ 1.22
RNF40-201ENST00000324685 INO80B-WBP1J3KQ70 363 aa22.69■■□□□ 1.22
RNF40-201ENST00000324685 PPEF1O14829 653 aaPredicted RBP22.69■■□□□ 1.22
RNF40-201ENST00000324685 CEP170P1Q96L14 293 aa22.69■■□□□ 1.22
RNF40-201ENST00000324685 INO80BQ9C086 356 aaPredicted RBP22.69■■□□□ 1.22
RNF40-201ENST00000324685 CACNB1Q02641 598 aaPredicted RBP22.68■■□□□ 1.22
RNF40-201ENST00000324685 KCTD1Q719H9 257 aa22.68■■□□□ 1.22
RNF40-201ENST00000324685 PCGF5Q86SE9 256 aa22.68■■□□□ 1.22
RNF40-201ENST00000324685 GRAMD1CQ8IYS0 662 aa22.68■■□□□ 1.22
RNF40-201ENST00000324685 PUS3Q9BZE2 481 aaKnown RBP22.68■■□□□ 1.22
RNF40-201ENST00000324685 PARVGQ9HBI0 331 aa22.68■■□□□ 1.22
RNF40-201ENST00000324685 CXCR5P32302 372 aa22.68■■□□□ 1.22
RNF40-201ENST00000324685 MYO1EQ12965 1108 aa22.68■■□□□ 1.22
RNF40-201ENST00000324685 CENPUQ71F23 418 aa22.68■■□□□ 1.22
RNF40-201ENST00000324685 PAGE5Q96GU1 130 aa22.68■■□□□ 1.22
RNF40-201ENST00000324685 TLR7Q9NYK1 1049 aaKnown RBP22.68■■□□□ 1.22
RNF40-201ENST00000324685 KRT80Q6KB66 452 aa22.68■■□□□ 1.22
RNF40-201ENST00000324685 ZC3H15Q8WU90 426 aaKnown RBP22.68■■□□□ 1.22
RNF40-201ENST00000324685 NBPF3Q9H094 633 aa22.68■■□□□ 1.22
RNF40-201ENST00000324685 ATG3Q9NT62 314 aa22.68■■□□□ 1.22
RNF40-201ENST00000324685 IFNAR1P17181 557 aa22.68■■□□□ 1.22
RNF40-201ENST00000324685 MXI1P50539 228 aa22.68■■□□□ 1.22
RNF40-201ENST00000324685 ZNF589Q86UQ0 364 aaPredicted RBP22.68■■□□□ 1.22
RNF40-201ENST00000324685 ZNF526Q8TF50 670 aaPredicted RBP22.68■■□□□ 1.22
RNF40-201ENST00000324685 SAMSN1Q9NSI8 373 aaKnown RBP22.68■■□□□ 1.22
RNF40-201ENST00000324685 NRBF2Q96F24 287 aa22.68■■□□□ 1.22
RNF40-201ENST00000324685 MAPK13O15264 365 aa22.67■■□□□ 1.22
RNF40-201ENST00000324685 SLCO1A2P46721 670 aa22.67■■□□□ 1.22
RNF40-201ENST00000324685 SULF1Q8IWU6 871 aa22.67■■□□□ 1.22
RNF40-201ENST00000324685 CALN1Q9BXU9 219 aa22.67■■□□□ 1.22
RNF40-201ENST00000324685 OSBPP22059 807 aa22.67■■□□□ 1.22
RNF40-201ENST00000324685 UBXN2AP68543 259 aa22.67■■□□□ 1.22
RNF40-201ENST00000324685 OR6B2Q6IFH4 312 aa22.67■■□□□ 1.22
RNF40-201ENST00000324685 EMBQ6PCB8 327 aa22.67■■□□□ 1.22
RNF40-201ENST00000324685 ABI1Q8IZP0 508 aa22.67■■□□□ 1.22
RNF40-201ENST00000324685 GDAP1Q8TB36 358 aa22.67■■□□□ 1.22
RNF40-201ENST00000324685 FGD4Q96M96 766 aa22.67■■□□□ 1.22
RNF40-201ENST00000324685 TBK1Q9UHD2 729 aa22.67■■□□□ 1.22
RNF40-201ENST00000324685 YEATS2Q9ULM3 1422 aa22.67■■□□□ 1.22
RNF40-201ENST00000324685 ESRRAP11474 423 aaPredicted RBP22.67■■□□□ 1.22
RNF40-201ENST00000324685 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.67■■□□□ 1.22
RNF40-201ENST00000324685 PGBD1Q96JS3 809 aa22.67■■□□□ 1.22
RNF40-201ENST00000324685 PLA2G4BP0C869 781 aa22.67■■□□□ 1.22
RNF40-201ENST00000324685 RHOT2Q8IXI1 618 aa22.67■■□□□ 1.22
RNF40-201ENST00000324685 SCINQ9Y6U3 715 aa22.67■■□□□ 1.22
RNF40-201ENST00000324685 KAT6BQ8WYB5 2073 aa22.66■■□□□ 1.22
RNF40-201ENST00000324685 CLCN6P51797 869 aa22.66■■□□□ 1.22
RNF40-201ENST00000324685 CASP8Q14790 479 aa22.66■■□□□ 1.22
RNF40-201ENST00000324685 CALR3Q96L12 384 aaKnown RBP22.66■■□□□ 1.22
RNF40-201ENST00000324685 NDST4Q9H3R1 872 aa22.66■■□□□ 1.22
RNF40-201ENST00000324685 TFAMQ00059 246 aaKnown RBP22.66■■□□□ 1.22
RNF40-201ENST00000324685 GLE1Q53GS7 698 aaKnown RBP22.66■■□□□ 1.22
RNF40-201ENST00000324685 ADAMTS12P58397 1594 aa22.66■■□□□ 1.22
RNF40-201ENST00000324685 TRPA1O75762 1119 aa22.66■■□□□ 1.22
RNF40-201ENST00000324685 CHEK2O96017 543 aa22.66■■□□□ 1.22
RNF40-201ENST00000324685 LMNAP02545 664 aaKnown RBP22.66■■□□□ 1.22
RNF40-201ENST00000324685 SYDE2Q5VT97 1194 aa22.66■■□□□ 1.22
RNF40-201ENST00000324685 DPY19L2Q6NUT2 758 aa22.66■■□□□ 1.22
RNF40-201ENST00000324685 KLC3Q6P597 504 aa22.66■■□□□ 1.22
RNF40-201ENST00000324685 RYBPQ8N488 228 aaPredicted RBP22.66■■□□□ 1.22
RNF40-201ENST00000324685 MB21D1Q8N884 522 aa22.66■■□□□ 1.22
RNF40-201ENST00000324685 LRRC4Q9HBW1 653 aa22.66■■□□□ 1.22
RNF40-201ENST00000324685 KRT82Q9NSB4 513 aa22.66■■□□□ 1.22
RNF40-201ENST00000324685 SPTLC3Q9NUV7 552 aa22.66■■□□□ 1.22
RNF40-201ENST00000324685 F8W8V4 182 aa22.66■■□□□ 1.22
RNF40-201ENST00000324685 BMP3P12645 472 aa22.66■■□□□ 1.22
RNF40-201ENST00000324685 NT5C2P49902 561 aa22.66■■□□□ 1.22
RNF40-201ENST00000324685 ARL6IP4Q66PJ3 421 aaKnown RBP22.66■■□□□ 1.22
RNF40-201ENST00000324685 BZW1Q7L1Q6 419 aaKnown RBP22.66■■□□□ 1.22
RNF40-201ENST00000324685 GUCY2CP25092 1073 aa22.66■■□□□ 1.22
RNF40-201ENST00000324685 RWDD2BP57060 319 aa22.66■■□□□ 1.22
RNF40-201ENST00000324685 SLC12A1Q13621 1099 aa22.66■■□□□ 1.22
RNF40-201ENST00000324685 FBXL13Q8NEE6 735 aa22.66■■□□□ 1.22
RNF40-201ENST00000324685 GIPC2Q8TF65 315 aa22.66■■□□□ 1.22
RNF40-201ENST00000324685 DHX38Q92620 1227 aaKnown RBP22.66■■□□□ 1.22
RNF40-201ENST00000324685 BCS1LQ9Y276 419 aa22.66■■□□□ 1.22
RNF40-201ENST00000324685 CCDC188H7C350 402 aa22.65■■□□□ 1.22
RNF40-201ENST00000324685 UBN1Q9NPG3 1134 aa22.65■■□□□ 1.22
RNF40-201ENST00000324685 LCMT1Q9UIC8 334 aa22.65■■□□□ 1.22
RNF40-201ENST00000324685 PLCG1P19174 1290 aa22.65■■□□□ 1.22
RNF40-201ENST00000324685 NCF2P19878 526 aaPredicted RBP22.65■■□□□ 1.22
RNF40-201ENST00000324685 RESTQ13127 1097 aa22.65■■□□□ 1.22
RNF40-201ENST00000324685 SIX6OS1Q8N1H7 587 aa22.65■■□□□ 1.22
RNF40-201ENST00000324685 TRAIPQ9BWF2 469 aa22.65■■□□□ 1.22
RNF40-201ENST00000324685 FIS1Q9Y3D6 152 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms