RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 PPP4R3CPQ6ZMV5 832 aa13.9□□□□□ -0.19
DNMT3A-202ENST00000321117 ADGRA1Q86SQ6 560 aa13.9□□□□□ -0.19
DNMT3A-202ENST00000321117 USP37Q86T82 979 aa13.9□□□□□ -0.19
DNMT3A-202ENST00000321117 PACS2Q86VP3 889 aa13.9□□□□□ -0.19
DNMT3A-202ENST00000321117 NCAPGQ9BPX3 1015 aa13.9□□□□□ -0.19
DNMT3A-202ENST00000321117 LTN1O94822 1766 aa13.89□□□□□ -0.19
DNMT3A-202ENST00000321117 RNF225M0QZC1 329 aaPredicted RBP13.89□□□□□ -0.19
DNMT3A-202ENST00000321117 SYF2O95926 243 aaKnown RBP13.89□□□□□ -0.19
DNMT3A-202ENST00000321117 MAGOHP61326 146 aaKnown RBP13.89□□□□□ -0.19
DNMT3A-202ENST00000321117 RIC1Q4ADV7 1423 aa13.89□□□□□ -0.19
DNMT3A-202ENST00000321117 TPH2Q8IWU9 490 aa13.89□□□□□ -0.19
DNMT3A-202ENST00000321117 NEK9Q8TD19 979 aa13.89□□□□□ -0.19
DNMT3A-202ENST00000321117 ARHGAP20Q9P2F6 1191 aa13.89□□□□□ -0.19
DNMT3A-202ENST00000321117 STXBP3O00186 592 aa13.89□□□□□ -0.19
DNMT3A-202ENST00000321117 CLIC2O15247 247 aa13.89□□□□□ -0.19
DNMT3A-202ENST00000321117 FGGP02679 453 aa13.89□□□□□ -0.19
DNMT3A-202ENST00000321117 EEF2P13639 858 aaKnown RBP13.89□□□□□ -0.19
DNMT3A-202ENST00000321117 PPP2R2AP63151 447 aa13.89□□□□□ -0.19
DNMT3A-202ENST00000321117 CCDC6Q16204 474 aa13.89□□□□□ -0.19
DNMT3A-202ENST00000321117 FAM205AQ6ZU69 1335 aa13.89□□□□□ -0.19
DNMT3A-202ENST00000321117 ARHGEF35A5YM69 484 aa13.89□□□□□ -0.19
DNMT3A-202ENST00000321117 SEC24CP53992 1094 aa13.89□□□□□ -0.19
DNMT3A-202ENST00000321117 MEA1Q16626 185 aa13.89□□□□□ -0.19
DNMT3A-202ENST00000321117 CLEC4GQ6UXB4 293 aa13.89□□□□□ -0.19
DNMT3A-202ENST00000321117 HDAC7Q8WUI4 952 aa13.89□□□□□ -0.19
DNMT3A-202ENST00000321117 RNPC3Q96LT9 517 aaKnown RBP13.89□□□□□ -0.19
DNMT3A-202ENST00000321117 USP17L5A8MUK1 530 aa13.88□□□□□ -0.19
DNMT3A-202ENST00000321117 SLC16A2P36021 539 aa13.88□□□□□ -0.19
DNMT3A-202ENST00000321117 GPATCH4Q5T3I0 446 aaKnown RBP13.88□□□□□ -0.19
DNMT3A-202ENST00000321117 VSIG1Q86XK7 387 aa13.88□□□□□ -0.19
DNMT3A-202ENST00000321117 NGLY1Q96IV0 654 aa13.88□□□□□ -0.19
DNMT3A-202ENST00000321117 SPZ1Q9BXG8 430 aa13.88□□□□□ -0.19
DNMT3A-202ENST00000321117 LEMD3Q9Y2U8 911 aa13.88□□□□□ -0.19
DNMT3A-202ENST00000321117 E9PMD0 336 aa13.88□□□□□ -0.19
DNMT3A-202ENST00000321117 PDE2AO00408 941 aaPredicted RBP13.88□□□□□ -0.19
DNMT3A-202ENST00000321117 MEIS1O00470 390 aa13.88□□□□□ -0.19
DNMT3A-202ENST00000321117 HNRNPH1P31943 449 aaKnown RBP13.88□□□□□ -0.19
DNMT3A-202ENST00000321117 FBXL5Q9UKA1 691 aa13.88□□□□□ -0.19
DNMT3A-202ENST00000321117 KLRC1P26715 233 aa13.88□□□□□ -0.19
DNMT3A-202ENST00000321117 ALDH3A1P30838 453 aa13.88□□□□□ -0.19
DNMT3A-202ENST00000321117 ZNF365Q70YC5 407 aa13.88□□□□□ -0.19
DNMT3A-202ENST00000321117 FAM186BQ8IYM0 893 aa13.88□□□□□ -0.19
DNMT3A-202ENST00000321117 FBF1Q8TES7 1133 aa13.88□□□□□ -0.19
DNMT3A-202ENST00000321117 MED15Q96RN5 788 aa13.88□□□□□ -0.19
DNMT3A-202ENST00000321117 PSMD1Q99460 953 aa13.88□□□□□ -0.19
DNMT3A-202ENST00000321117 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.88□□□□□ -0.192e-7■■□□□ 12.2
DNMT3A-202ENST00000321117 STK38LQ9Y2H1 464 aa13.88□□□□□ -0.19
DNMT3A-202ENST00000321117 TOPAZ1Q8N9V7 1692 aa13.88□□□□□ -0.19
DNMT3A-202ENST00000321117 GBP1P32455 592 aa13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 GTF2IP78347 998 aa13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 DR1Q01658 176 aa13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.87□□□□□ -0.191e-8■■■■■ 66.3
DNMT3A-202ENST00000321117 SART1O43290 800 aaKnown RBP13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 PRPF6O94906 941 aaKnown RBP13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 RPSAP08865 295 aaKnown RBP13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 STX2P32856 288 aa13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 WDR59Q6PJI9 974 aa13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 MAEAQ7L5Y9 396 aa13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 FAM178BQ8IXR5 827 aa13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 CEP95Q96GE4 821 aa13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 DUSP9Q99956 384 aaKnown RBP13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 ZMYND12Q9H0C1 365 aa13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 REXO2Q9Y3B8 237 aaKnown RBP13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 NOC2LQ9Y3T9 749 aaKnown RBP13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 ATP2A1O14983 1001 aa13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 DAPK3O43293 454 aa13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 RAD51CO43502 376 aa13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 ACTN3Q08043 901 aaPredicted RBP13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 CDC37Q16543 378 aaPredicted RBP13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 TMEM132AQ24JP5 1023 aa13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 AENQ8WTP8 325 aaKnown RBP13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 KLC4Q9NSK0 619 aa13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 AMACRQ9UHK6 382 aa13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 RABGAP1Q9Y3P9 1069 aa13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 ATRNO75882 1429 aa13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 WNT7AO00755 349 aa13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 FANCGO15287 622 aa13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 TTLL1O95922 423 aa13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 SLCO1A2P46721 670 aa13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 TRAPPC3LQ5T215 181 aa13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 MEX3CQ5U5Q3 659 aaKnown RBP13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 KCTD1Q719H9 257 aa13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 N4BP2L2Q92802 583 aaPredicted RBP13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 RUNDC3BQ96NL0 473 aa13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 TACO1Q9BSH4 297 aaKnown RBP13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 CCNL1Q9UK58 526 aaPredicted RBP13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 CD2APQ9Y5K6 639 aa13.87□□□□□ -0.19
DNMT3A-202ENST00000321117 SLIT3O75094 1523 aa13.86□□□□□ -0.19
DNMT3A-202ENST00000321117 PNMA6FA0A0J9YX94 578 aa13.86□□□□□ -0.19
DNMT3A-202ENST00000321117 GAS8O95995 478 aa13.86□□□□□ -0.19
DNMT3A-202ENST00000321117 PSMC2P35998 433 aaKnown RBP13.86□□□□□ -0.19
DNMT3A-202ENST00000321117 KCNQ4P56696 695 aa13.86□□□□□ -0.19
DNMT3A-202ENST00000321117 ITIH3Q06033 890 aa13.86□□□□□ -0.19
DNMT3A-202ENST00000321117 NAB2Q15742 525 aa13.86□□□□□ -0.19
DNMT3A-202ENST00000321117 CREG2Q8IUH2 290 aa13.86□□□□□ -0.19
DNMT3A-202ENST00000321117 BICD1Q96G01 975 aa13.86□□□□□ -0.19
DNMT3A-202ENST00000321117 MRC1P22897 1456 aa13.86□□□□□ -0.19
DNMT3A-202ENST00000321117 SMIM22K7EJ46 135 aa13.86□□□□□ -0.19
DNMT3A-202ENST00000321117 MYBL2P10244 700 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms