RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 FAM114A1Q8IWE2 563 aa19.86■□□□□ 0.77
RAB39A-201ENST00000320578 OTUD5Q96G74 571 aa19.86■□□□□ 0.77
RAB39A-201ENST00000320578 DUSP9Q99956 384 aaKnown RBP19.86■□□□□ 0.77
RAB39A-201ENST00000320578 SLC39A2Q9NP94 309 aa19.86■□□□□ 0.77
RAB39A-201ENST00000320578 A1CFQ9NQ94 594 aaKnown RBP19.86■□□□□ 0.77
RAB39A-201ENST00000320578 PCDHA2Q9Y5H9 948 aa19.86■□□□□ 0.77
RAB39A-201ENST00000320578 A0A0G2JMZ2 1700 aa19.85■□□□□ 0.77
RAB39A-201ENST00000320578 KCNJ18B7U540 433 aa19.85■□□□□ 0.77
RAB39A-201ENST00000320578 SSBP05455 408 aaKnown RBP eCLIP19.85■□□□□ 0.77
RAB39A-201ENST00000320578 NR3C2P08235 984 aa19.85■□□□□ 0.77
RAB39A-201ENST00000320578 COPB2P35606 906 aa19.85■□□□□ 0.77
RAB39A-201ENST00000320578 PMS1P54277 932 aaKnown RBP19.85■□□□□ 0.77
RAB39A-201ENST00000320578 KCNJ12Q14500 433 aa19.85■□□□□ 0.77
RAB39A-201ENST00000320578 FAM26FQ5R3K3 315 aa19.85■□□□□ 0.77
RAB39A-201ENST00000320578 SPECC1LQ69YQ0 1117 aa19.85■□□□□ 0.77
RAB39A-201ENST00000320578 NLRX1Q86UT6 975 aa19.85■□□□□ 0.77
RAB39A-201ENST00000320578 IRF2BP1Q8IU81 584 aa19.85■□□□□ 0.77
RAB39A-201ENST00000320578 DNERQ8NFT8 737 aa19.85■□□□□ 0.77
RAB39A-201ENST00000320578 RDM1Q8NG50 284 aa19.85■□□□□ 0.77
RAB39A-201ENST00000320578 DYDC2Q96IM9 177 aa19.85■□□□□ 0.77
RAB39A-201ENST00000320578 CLMNQ96JQ2 1002 aa19.85■□□□□ 0.77
RAB39A-201ENST00000320578 TRIM47Q96LD4 638 aa19.85■□□□□ 0.77
RAB39A-201ENST00000320578 IWS1Q96ST2 819 aa19.85■□□□□ 0.77
RAB39A-201ENST00000320578 RGL1Q9NZL6 768 aa19.85■□□□□ 0.77
RAB39A-201ENST00000320578 LYPLA2O95372 231 aa19.84■□□□□ 0.77
RAB39A-201ENST00000320578 FGFR1OPO95684 399 aaKnown RBP19.84■□□□□ 0.77
RAB39A-201ENST00000320578 PBX1P40424 430 aa19.84■□□□□ 0.77
RAB39A-201ENST00000320578 GIT2Q14161 759 aa19.84■□□□□ 0.77
RAB39A-201ENST00000320578 KRT31Q15323 416 aa19.84■□□□□ 0.77
RAB39A-201ENST00000320578 GADL1Q6ZQY3 521 aa19.84■□□□□ 0.77
RAB39A-201ENST00000320578 INPP4AQ96PE3 977 aaPredicted RBP19.84■□□□□ 0.77
RAB39A-201ENST00000320578 SPTLC3Q9NUV7 552 aa19.84■□□□□ 0.77
RAB39A-201ENST00000320578 COL11A1P12107 1806 aaPredicted RBP19.84■□□□□ 0.77
RAB39A-201ENST00000320578 PFASO15067 1338 aa19.84■□□□□ 0.77
RAB39A-201ENST00000320578 P4HBP07237 508 aaKnown RBP19.83■□□□□ 0.77
RAB39A-201ENST00000320578 IRX3P78415 501 aaPredicted RBP19.83■□□□□ 0.77
RAB39A-201ENST00000320578 ITGB3BPQ13352 177 aaPredicted RBP19.83■□□□□ 0.77
RAB39A-201ENST00000320578 HSP90AA4PQ58FG1 418 aa19.83■□□□□ 0.77
RAB39A-201ENST00000320578 ANKRD40Q6AI12 368 aa19.83■□□□□ 0.77
RAB39A-201ENST00000320578 MYOCDQ8IZQ8 938 aa19.83■□□□□ 0.77
RAB39A-201ENST00000320578 CSGALNACT2Q8N6G5 542 aa19.83■□□□□ 0.77
RAB39A-201ENST00000320578 CDHR1Q96JP9 859 aa19.83■□□□□ 0.77
RAB39A-201ENST00000320578 SENP7Q9BQF6 1050 aa19.83■□□□□ 0.77
RAB39A-201ENST00000320578 SRRTQ9BXP5 876 aaKnown RBP19.83■□□□□ 0.77
RAB39A-201ENST00000320578 ITIH6Q6UXX5 1313 aa19.83■□□□□ 0.77
RAB39A-201ENST00000320578 TRIM49BA6NDI0 452 aa19.83■□□□□ 0.76
RAB39A-201ENST00000320578 NRDCO43847 1150 aa19.83■□□□□ 0.76
RAB39A-201ENST00000320578 KRT18P05783 430 aaKnown RBP19.83■□□□□ 0.76
RAB39A-201ENST00000320578 SFPQP23246 707 aaKnown RBP eCLIP19.83■□□□□ 0.76
RAB39A-201ENST00000320578 SFNP31947 248 aa19.83■□□□□ 0.76
RAB39A-201ENST00000320578 KCNJ6P48051 423 aa19.83■□□□□ 0.76
RAB39A-201ENST00000320578 COPB1P53618 953 aaKnown RBP19.83■□□□□ 0.76
RAB39A-201ENST00000320578 FKBP1BP68106 108 aa19.83■□□□□ 0.76
RAB39A-201ENST00000320578 CYP4A11Q02928 519 aa19.83■□□□□ 0.76
RAB39A-201ENST00000320578 MOGSQ13724 837 aa19.83■□□□□ 0.76
RAB39A-201ENST00000320578 MIER3Q7Z3K6 550 aa19.83■□□□□ 0.76
RAB39A-201ENST00000320578 TPH2Q8IWU9 490 aa19.83■□□□□ 0.76
RAB39A-201ENST00000320578 SEMA6BQ9H3T3 888 aa19.83■□□□□ 0.76
RAB39A-201ENST00000320578 MAGEC2Q9UBF1 373 aaPredicted RBP19.83■□□□□ 0.76
RAB39A-201ENST00000320578 PYCARDQ9ULZ3 195 aa19.83■□□□□ 0.76
RAB39A-201ENST00000320578 MYCLP12524 364 aaPredicted RBP19.82■□□□□ 0.76
RAB39A-201ENST00000320578 GAP43P17677 238 aa19.82■□□□□ 0.76
RAB39A-201ENST00000320578 JAK3P52333 1124 aa19.82■□□□□ 0.76
RAB39A-201ENST00000320578 KRT76Q01546 638 aa19.82■□□□□ 0.76
RAB39A-201ENST00000320578 LRMPQ12912 555 aa19.82■□□□□ 0.76
RAB39A-201ENST00000320578 CTTNQ14247 550 aaKnown RBP19.82■□□□□ 0.76
RAB39A-201ENST00000320578 PLS1Q14651 629 aa19.82■□□□□ 0.76
RAB39A-201ENST00000320578 ARMCX5Q6P1M9 558 aa19.82■□□□□ 0.76
RAB39A-201ENST00000320578 MOB2Q70IA6 237 aa19.82■□□□□ 0.76
RAB39A-201ENST00000320578 CCDC112Q8NEF3 446 aa19.82■□□□□ 0.76
RAB39A-201ENST00000320578 OPTNQ96CV9 577 aa19.82■□□□□ 0.76
RAB39A-201ENST00000320578 ASCC2Q9H1I8 757 aaPredicted RBP19.82■□□□□ 0.76
RAB39A-201ENST00000320578 BHMT2Q9H2M3 363 aa19.82■□□□□ 0.76
RAB39A-201ENST00000320578 ZSWIM4Q9H7M6 989 aa19.82■□□□□ 0.76
RAB39A-201ENST00000320578 CHMP2AO43633 222 aa19.81■□□□□ 0.76
RAB39A-201ENST00000320578 SLC25A27O95847 323 aa19.81■□□□□ 0.76
RAB39A-201ENST00000320578 OSBPP22059 807 aa19.81■□□□□ 0.76
RAB39A-201ENST00000320578 CCZ1BP86790 482 aa19.81■□□□□ 0.76
RAB39A-201ENST00000320578 CCZ1P86791 482 aaPredicted RBP19.81■□□□□ 0.76
RAB39A-201ENST00000320578 NOLC1Q14978 699 aaKnown RBP eCLIP19.81■□□□□ 0.76
RAB39A-201ENST00000320578 HERC4Q5GLZ8 1057 aaPredicted RBP19.81■□□□□ 0.76
RAB39A-201ENST00000320578 RINT1Q6NUQ1 792 aa19.81■□□□□ 0.76
RAB39A-201ENST00000320578 C1orf186Q6ZWK4 172 aa19.81■□□□□ 0.76
RAB39A-201ENST00000320578 HPS3Q969F9 1004 aa19.81■□□□□ 0.76
RAB39A-201ENST00000320578 TSG101Q99816 390 aa19.81■□□□□ 0.76
RAB39A-201ENST00000320578 SPATC1LQ9H0A9 340 aa19.81■□□□□ 0.76
RAB39A-201ENST00000320578 KCND1Q9NSA2 647 aa19.81■□□□□ 0.76
RAB39A-201ENST00000320578 BTBD7Q9P203 1132 aa19.81■□□□□ 0.76
RAB39A-201ENST00000320578 HERVK_113P62684 666 aa19.81■□□□□ 0.76
RAB39A-201ENST00000320578 GTF3C2Q8WUA4 911 aaPredicted RBP19.81■□□□□ 0.76
RAB39A-201ENST00000320578 ZFP91Q96JP5 570 aaPredicted RBP19.81■□□□□ 0.76
RAB39A-201ENST00000320578 LXNQ9BS40 222 aa19.81■□□□□ 0.76
RAB39A-201ENST00000320578 DBR1Q9UK59 544 aaKnown RBP19.81■□□□□ 0.76
RAB39A-201ENST00000320578 COL4A3BPQ9Y5P4 624 aa19.81■□□□□ 0.76
RAB39A-201ENST00000320578 NFASCO94856 1347 aa19.81■□□□□ 0.76
RAB39A-201ENST00000320578 N4BP3O15049 544 aa19.8■□□□□ 0.76
RAB39A-201ENST00000320578 SKILP12757 684 aa19.8■□□□□ 0.76
RAB39A-201ENST00000320578 SNAPC2Q13487 334 aa19.8■□□□□ 0.76
RAB39A-201ENST00000320578 ARID5BQ14865 1188 aa19.8■□□□□ 0.76
RAB39A-201ENST00000320578 ZCWPW2Q504Y3 356 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms