RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 LRRC55Q6ZSA7 311 aa16.48■□□□□ 0.23
CHFR-202ENST00000315585 DNAJC19Q96DA6 116 aa16.48■□□□□ 0.23
CHFR-202ENST00000315585 EEF2KMTQ96G04 330 aa16.48■□□□□ 0.23
CHFR-202ENST00000315585 TMEM39BQ9GZU3 492 aa16.48■□□□□ 0.23
CHFR-202ENST00000315585 VIPAS39Q9H9C1 493 aa16.48■□□□□ 0.23
CHFR-202ENST00000315585 JADE2Q9NQC1 790 aa16.48■□□□□ 0.23
CHFR-202ENST00000315585 GINM1Q9NU53 330 aa16.48■□□□□ 0.23
CHFR-202ENST00000315585 TSKSQ9UJT2 592 aa16.48■□□□□ 0.23
CHFR-202ENST00000315585 PCDHA13Q9Y5I0 950 aa16.48■□□□□ 0.23
CHFR-202ENST00000315585 EDIL3O43854 480 aa16.47■□□□□ 0.23
CHFR-202ENST00000315585 PPP1R11O60927 126 aaPredicted RBP16.47■□□□□ 0.23
CHFR-202ENST00000315585 USP14P54578 494 aa16.47■□□□□ 0.23
CHFR-202ENST00000315585 MARSP56192 900 aaKnown RBP16.47■□□□□ 0.23
CHFR-202ENST00000315585 RNF10Q8N5U6 811 aaKnown RBP16.47■□□□□ 0.23
CHFR-202ENST00000315585 MBOAT7Q96N66 472 aa16.47■□□□□ 0.23
CHFR-202ENST00000315585 FAM207AQ9NSI2 230 aaPredicted RBP16.47■□□□□ 0.23
CHFR-202ENST00000315585 TRIM10Q9UDY6 481 aa16.47■□□□□ 0.23
CHFR-202ENST00000315585 POLR3GO15318 223 aaPredicted RBP16.47■□□□□ 0.23
CHFR-202ENST00000315585 ATP1A1P05023 1023 aaKnown RBP16.47■□□□□ 0.23
CHFR-202ENST00000315585 ASNSP08243 561 aa16.47■□□□□ 0.23
CHFR-202ENST00000315585 PLA2G4BP0C869 781 aa16.47■□□□□ 0.23
CHFR-202ENST00000315585 TCP1P17987 556 aaKnown RBP16.47■□□□□ 0.23
CHFR-202ENST00000315585 KLK7P49862 253 aa16.47■□□□□ 0.23
CHFR-202ENST00000315585 KIF11P52732 1056 aa16.47■□□□□ 0.23
CHFR-202ENST00000315585 MAPK8IP2Q13387 824 aaPredicted RBP16.47■□□□□ 0.23
CHFR-202ENST00000315585 NBPF9Q3BBW0 867 aa16.47■□□□□ 0.23
CHFR-202ENST00000315585 SLC9C1Q4G0N8 1177 aa16.47■□□□□ 0.23
CHFR-202ENST00000315585 NCAPH2Q6IBW4 605 aa16.47■□□□□ 0.23
CHFR-202ENST00000315585 FBXO11Q86XK2 927 aa16.47■□□□□ 0.23
CHFR-202ENST00000315585 HPS3Q969F9 1004 aa16.47■□□□□ 0.23
CHFR-202ENST00000315585 PNKPQ96T60 521 aa16.47■□□□□ 0.23
CHFR-202ENST00000315585 ANO3Q9BYT9 981 aa16.47■□□□□ 0.23
CHFR-202ENST00000315585 ABCB6Q9NP58 842 aa16.47■□□□□ 0.23
CHFR-202ENST00000315585 KCNMB3Q9NPA1 279 aa16.47■□□□□ 0.23
CHFR-202ENST00000315585 PSD3Q9NYI0 1048 aa16.47■□□□□ 0.23
CHFR-202ENST00000315585 CEP72Q9P209 647 aa16.47■□□□□ 0.23
CHFR-202ENST00000315585 SSBP05455 408 aaKnown RBP eCLIP16.46■□□□□ 0.23
CHFR-202ENST00000315585 KRT18P05783 430 aaKnown RBP16.46■□□□□ 0.23
CHFR-202ENST00000315585 CAP2P40123 477 aa16.46■□□□□ 0.23
CHFR-202ENST00000315585 RRP1BQ14684 758 aaKnown RBP16.46■□□□□ 0.23
CHFR-202ENST00000315585 EDRF1Q3B7T1 1238 aa16.46■□□□□ 0.23
CHFR-202ENST00000315585 RRAGAQ7L523 313 aa16.46■□□□□ 0.23
CHFR-202ENST00000315585 EXOC4Q96A65 974 aa16.46■□□□□ 0.23
CHFR-202ENST00000315585 FAM20AQ96MK3 541 aa16.46■□□□□ 0.23
CHFR-202ENST00000315585 MED4Q9NPJ6 270 aa16.46■□□□□ 0.23
CHFR-202ENST00000315585 CALCOCO1Q9P1Z2 691 aa16.46■□□□□ 0.23
CHFR-202ENST00000315585 KIAA1024Q9UPX6 916 aa16.46■□□□□ 0.23
CHFR-202ENST00000315585 FZD9O00144 591 aa16.46■□□□□ 0.23
CHFR-202ENST00000315585 ENC1O14682 589 aa16.46■□□□□ 0.23
CHFR-202ENST00000315585 STAT2P52630 851 aa16.46■□□□□ 0.23
CHFR-202ENST00000315585 ZCWPW2Q504Y3 356 aa16.46■□□□□ 0.23
CHFR-202ENST00000315585 HERC4Q5GLZ8 1057 aaPredicted RBP16.46■□□□□ 0.23
CHFR-202ENST00000315585 CHURC1Q8WUH1 139 aa16.46■□□□□ 0.23
CHFR-202ENST00000315585 NUDT12Q9BQG2 462 aa16.46■□□□□ 0.23
CHFR-202ENST00000315585 LACRTQ9GZZ8 138 aa16.46■□□□□ 0.23
CHFR-202ENST00000315585 ST7Q9NRC1 585 aa16.46■□□□□ 0.23
CHFR-202ENST00000315585 SPDYE3A6NKU9 549 aa16.45■□□□□ 0.22
CHFR-202ENST00000315585 EPS15P42566 896 aa16.45■□□□□ 0.22
CHFR-202ENST00000315585 VSNL1P62760 191 aa16.45■□□□□ 0.22
CHFR-202ENST00000315585 JAG1P78504 1218 aa16.45■□□□□ 0.22
CHFR-202ENST00000315585 ARHGAP20Q9P2F6 1191 aa16.45■□□□□ 0.22
CHFR-202ENST00000315585 RNF14Q9UBS8 474 aa16.45■□□□□ 0.22
CHFR-202ENST00000315585 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.45■□□□□ 0.22
CHFR-202ENST00000315585 A0A1W2PRG0 241 aa16.45■□□□□ 0.22
CHFR-202ENST00000315585 MACROD2A1Z1Q3 448 aa16.45■□□□□ 0.22
CHFR-202ENST00000315585 CETN3O15182 167 aa16.45■□□□□ 0.22
CHFR-202ENST00000315585 PJA2O43164 708 aa16.45■□□□□ 0.22
CHFR-202ENST00000315585 PLA2G6O60733 806 aa16.45■□□□□ 0.22
CHFR-202ENST00000315585 PTGER2P43116 358 aa16.45■□□□□ 0.22
CHFR-202ENST00000315585 MAGEA1P43355 309 aa16.45■□□□□ 0.22
CHFR-202ENST00000315585 Q4G0T1 1027 aa16.45■□□□□ 0.22
CHFR-202ENST00000315585 PDXDC1Q6P996 788 aa16.45■□□□□ 0.22
CHFR-202ENST00000315585 KCNK18Q7Z418 384 aa16.45■□□□□ 0.22
CHFR-202ENST00000315585 GPBP1Q86WP2 473 aa16.45■□□□□ 0.22
CHFR-202ENST00000315585 VCPKMTQ9H867 229 aa16.45■□□□□ 0.22
CHFR-202ENST00000315585 EMILIN3Q9NT22 766 aa16.45■□□□□ 0.22
CHFR-202ENST00000315585 DNM3Q9UQ16 869 aa16.45■□□□□ 0.22
CHFR-202ENST00000315585 LRRC53A6NM62 1247 aa16.44■□□□□ 0.22
CHFR-202ENST00000315585 SERPING1P05155 500 aa16.44■□□□□ 0.22
CHFR-202ENST00000315585 EIF4A3P38919 411 aaKnown RBP16.44■□□□□ 0.22
CHFR-202ENST00000315585 CYP27A1Q02318 531 aa16.44■□□□□ 0.22
CHFR-202ENST00000315585 RASA3Q14644 834 aa16.44■□□□□ 0.22
CHFR-202ENST00000315585 CASP8Q14790 479 aa16.44■□□□□ 0.22
CHFR-202ENST00000315585 SFMBT2Q5VUG0 894 aa16.44■□□□□ 0.22
CHFR-202ENST00000315585 FAM160B2Q86V87 743 aa16.44■□□□□ 0.22
CHFR-202ENST00000315585 NOA1Q8NC60 698 aaKnown RBP16.44■□□□□ 0.22
CHFR-202ENST00000315585 HOOK2Q96ED9 719 aa16.44■□□□□ 0.22
CHFR-202ENST00000315585 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.44■□□□□ 0.22
CHFR-202ENST00000315585 PGAP2Q9UHJ9 254 aa16.44■□□□□ 0.22
CHFR-202ENST00000315585 SNX12Q9UMY4 172 aa16.44■□□□□ 0.22
CHFR-202ENST00000315585 PAFAH1B1P43034 410 aa16.44■□□□□ 0.22
CHFR-202ENST00000315585 GMPSP49915 693 aaPredicted RBP16.44■□□□□ 0.22
CHFR-202ENST00000315585 MIGA2Q7L4E1 593 aa16.44■□□□□ 0.22
CHFR-202ENST00000315585 MICALL2Q8IY33 904 aa16.44■□□□□ 0.22
CHFR-202ENST00000315585 FAM71BQ8TC56 605 aa16.44■□□□□ 0.22
CHFR-202ENST00000315585 NOX5Q96PH1 765 aa16.44■□□□□ 0.22
CHFR-202ENST00000315585 FRMD3A2A2Y4 597 aa16.43■□□□□ 0.22
CHFR-202ENST00000315585 RPA1P27694 616 aa16.43■□□□□ 0.22
CHFR-202ENST00000315585 ARHGAP4P98171 946 aa16.43■□□□□ 0.22
CHFR-202ENST00000315585 ZNF572Q7Z3I7 529 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms