RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 ZNF233A6NK53 670 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 PPP6R2O75170 966 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 EVCP57679 992 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 TUBB4BP68371 445 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 TAOK1Q7L7X3 1001 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 CCNYQ8ND76 341 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 MTRQ99707 1265 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 TMEM260Q9NX78 707 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 SLC8A2Q9UPR5 921 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 AP3B2Q13367 1082 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 SLC39A14Q15043 492 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 ARMCX2Q7L311 632 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 DEFB129Q9H1M3 183 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 EMILIN3Q9NT22 766 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 MYO3AQ8NEV4 1616 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 MED7O43513 233 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 ARHGAP4P98171 946 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 LGSNQ5TDP6 509 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 AFAP1L2Q8N4X5 818 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 STK17AQ9UEE5 414 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 FAM184BQ9ULE4 1060 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 KRT15P19012 456 aa14.67□□□□□ -0.06
RFFL-201ENST00000315249 MUM1L1Q5H9M0 696 aa14.67□□□□□ -0.06
RFFL-201ENST00000315249 GCNT4Q9P109 453 aa14.67□□□□□ -0.06
RFFL-201ENST00000315249 RGS12O14924 1447 aa14.67□□□□□ -0.06
RFFL-201ENST00000315249 PRELPP51888 382 aa14.67□□□□□ -0.06
RFFL-201ENST00000315249 FAM117BQ6P1L5 589 aa14.67□□□□□ -0.06
RFFL-201ENST00000315249 CYFIP1Q7L576 1253 aa14.67□□□□□ -0.06
RFFL-201ENST00000315249 LMBRD1Q9NUN5 540 aa14.67□□□□□ -0.06
RFFL-201ENST00000315249 MAP2P11137 1827 aaKnown RBP14.67□□□□□ -0.06
RFFL-201ENST00000315249 TFRCP02786 760 aaKnown RBP14.67□□□□□ -0.06
RFFL-201ENST00000315249 TMTC3Q6ZXV5 915 aa14.67□□□□□ -0.06
RFFL-201ENST00000315249 RFX6Q8HWS3 928 aa14.67□□□□□ -0.06
RFFL-201ENST00000315249 FEZ2Q9UHY8 353 aaPredicted RBP14.67□□□□□ -0.06
RFFL-201ENST00000315249 ANAPC4Q9UJX5 808 aa14.67□□□□□ -0.06
RFFL-201ENST00000315249 DPYSL4O14531 572 aa14.67□□□□□ -0.06
RFFL-201ENST00000315249 TXNP10599 105 aaKnown RBP14.67□□□□□ -0.06
RFFL-201ENST00000315249 ZNF18P17022 549 aa14.67□□□□□ -0.06
RFFL-201ENST00000315249 KCNJ6P48051 423 aa14.67□□□□□ -0.06
RFFL-201ENST00000315249 SPATA1Q5VX52 437 aa14.67□□□□□ -0.06
RFFL-201ENST00000315249 TRIML1Q8N9V2 468 aa14.67□□□□□ -0.06
RFFL-201ENST00000315249 ASB14A6NK59 587 aa14.67□□□□□ -0.06
RFFL-201ENST00000315249 RASSF7Q02833 373 aa14.67□□□□□ -0.06
RFFL-201ENST00000315249 RRAGCQ9HB90 399 aa14.67□□□□□ -0.06
RFFL-201ENST00000315249 MYO1FO00160 1098 aa14.67□□□□□ -0.06
RFFL-201ENST00000315249 QRICH1Q2TAL8 776 aa14.67□□□□□ -0.06
RFFL-201ENST00000315249 RBM46Q8TBY0 533 aaKnown RBP14.67□□□□□ -0.06
RFFL-201ENST00000315249 VPS18Q9P253 973 aa14.67□□□□□ -0.06
RFFL-201ENST00000315249 TPD52P55327 224 aaPredicted RBP14.66□□□□□ -0.06
RFFL-201ENST00000315249 PSPC1Q8WXF1 523 aaKnown RBP14.66□□□□□ -0.06
RFFL-201ENST00000315249 ADCY8P40145 1251 aa14.66□□□□□ -0.06
RFFL-201ENST00000315249 KIF23Q02241 960 aaPredicted RBP14.66□□□□□ -0.06
RFFL-201ENST00000315249 SURF1Q15526 300 aa14.66□□□□□ -0.06
RFFL-201ENST00000315249 TICAM2Q86XR7 235 aa14.66□□□□□ -0.06
RFFL-201ENST00000315249 TTC30BQ8N4P2 665 aa14.66□□□□□ -0.06
RFFL-201ENST00000315249 CHAMP1Q96JM3 812 aa14.66□□□□□ -0.06
RFFL-201ENST00000315249 ARHGAP6O43182 974 aa14.66□□□□□ -0.06
RFFL-201ENST00000315249 LLGL1Q15334 1064 aa14.66□□□□□ -0.06
RFFL-201ENST00000315249 OR6B2Q6IFH4 312 aa14.66□□□□□ -0.06
RFFL-201ENST00000315249 IQCDQ96DY2 449 aa14.66□□□□□ -0.06
RFFL-201ENST00000315249 TOPORSQ9NS56 1045 aaPredicted RBP14.66□□□□□ -0.06
RFFL-201ENST00000315249 DAGLAQ9Y4D2 1042 aa14.66□□□□□ -0.06
RFFL-201ENST00000315249 PCDHA5Q9Y5H7 936 aa14.66□□□□□ -0.06
RFFL-201ENST00000315249 ZNF394Q53GI3 561 aa14.66□□□□□ -0.06
RFFL-201ENST00000315249 SLFN12LQ6IEE8 588 aa14.66□□□□□ -0.06
RFFL-201ENST00000315249 OSBPL5Q9H0X9 879 aaPredicted RBP14.66□□□□□ -0.06
RFFL-201ENST00000315249 UBN1Q9NPG3 1134 aa14.66□□□□□ -0.06
RFFL-201ENST00000315249 GJB4Q9NTQ9 266 aa14.66□□□□□ -0.06
RFFL-201ENST00000315249 PFDN6O15212 129 aa14.66□□□□□ -0.06
RFFL-201ENST00000315249 LDHDQ86WU2 507 aa14.66□□□□□ -0.06
RFFL-201ENST00000315249 ATP2A3Q93084 1043 aa14.66□□□□□ -0.06
RFFL-201ENST00000315249 P2RX5Q93086 422 aa14.66□□□□□ -0.06
RFFL-201ENST00000315249 TBC1D22BQ9NU19 505 aa14.66□□□□□ -0.06
RFFL-201ENST00000315249 ZNF148Q9UQR1 794 aa14.66□□□□□ -0.06
RFFL-201ENST00000315249 MADDQ8WXG6 1647 aa14.66□□□□□ -0.06
RFFL-201ENST00000315249 POTEMA6NI47 508 aa14.66□□□□□ -0.06
RFFL-201ENST00000315249 CDC42EP5Q6NZY7 148 aa14.66□□□□□ -0.06
RFFL-201ENST00000315249 MAD1L1Q9Y6D9 718 aa14.66□□□□□ -0.06
RFFL-201ENST00000315249 UBE2Q2LH0YL09 131 aa14.65□□□□□ -0.06
RFFL-201ENST00000315249 HGSO14964 777 aaPredicted RBP14.65□□□□□ -0.06
RFFL-201ENST00000315249 DYNC1LI2O43237 492 aaPredicted RBP14.65□□□□□ -0.06
RFFL-201ENST00000315249 COPB2P35606 906 aa14.65□□□□□ -0.06
RFFL-201ENST00000315249 NBPF11Q86T75 865 aa14.65□□□□□ -0.06
RFFL-201ENST00000315249 MAP7D3Q8IWC1 876 aa14.65□□□□□ -0.06
RFFL-201ENST00000315249 DESI2Q9BSY9 194 aa14.65□□□□□ -0.06
RFFL-201ENST00000315249 USP31Q70CQ4 1352 aa14.65□□□□□ -0.06
RFFL-201ENST00000315249 USP42Q9H9J4 1324 aaKnown RBP14.65□□□□□ -0.06
RFFL-201ENST00000315249 FKBP3Q00688 224 aaKnown RBP14.65□□□□□ -0.06
RFFL-201ENST00000315249 ZNF34Q8IZ26 560 aa14.65□□□□□ -0.06
RFFL-201ENST00000315249 DYDC2Q96IM9 177 aa14.65□□□□□ -0.06
RFFL-201ENST00000315249 EPSTI1Q96J88 318 aa14.65□□□□□ -0.06
RFFL-201ENST00000315249 CACYBPQ9HB71 228 aaKnown RBP14.65□□□□□ -0.06
RFFL-201ENST00000315249 KRIT1O00522 736 aa14.65□□□□□ -0.06
RFFL-201ENST00000315249 ECE1P42892 770 aa14.65□□□□□ -0.06
RFFL-201ENST00000315249 MXI1P50539 228 aa14.65□□□□□ -0.06
RFFL-201ENST00000315249 SF3B3Q15393 1217 aaKnown RBP14.65□□□□□ -0.06
RFFL-201ENST00000315249 SCYL1Q96KG9 808 aa14.65□□□□□ -0.06
RFFL-201ENST00000315249 IPO5O00410 1097 aaKnown RBP14.65□□□□□ -0.06
RFFL-201ENST00000315249 CTSHP09668 335 aa14.65□□□□□ -0.06
RFFL-201ENST00000315249 COPB1P53618 953 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms