RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 NLRP5P59047 1200 aa19.74■□□□□ 0.75
SPSB4-201ENST00000310546 PDE4DQ08499 809 aa19.74■□□□□ 0.75
SPSB4-201ENST00000310546 STK4Q13043 487 aa19.74■□□□□ 0.75
SPSB4-201ENST00000310546 RIPK1Q13546 671 aa19.74■□□□□ 0.75
SPSB4-201ENST00000310546 ALX1Q15699 326 aa19.74■□□□□ 0.75
SPSB4-201ENST00000310546 CCDC152Q4G0S7 254 aa19.74■□□□□ 0.75
SPSB4-201ENST00000310546 MAEAQ7L5Y9 396 aa19.74■□□□□ 0.75
SPSB4-201ENST00000310546 SPICE1Q8N0Z3 855 aa19.74■□□□□ 0.75
SPSB4-201ENST00000310546 ELAC2Q9BQ52 826 aaKnown RBP19.74■□□□□ 0.75
SPSB4-201ENST00000310546 TCRBV5S4A2TA0A5A2 114 aa19.74■□□□□ 0.75
SPSB4-201ENST00000310546 BICDL2A1A5D9 508 aa19.74■□□□□ 0.75
SPSB4-201ENST00000310546 GRID2IPA4D2P6 1211 aa19.74■□□□□ 0.75
SPSB4-201ENST00000310546 RPS6KA4O75676 772 aa19.74■□□□□ 0.75
SPSB4-201ENST00000310546 FCER1AP12319 257 aa19.74■□□□□ 0.75
SPSB4-201ENST00000310546 PECAM1P16284 738 aaPredicted RBP19.74■□□□□ 0.75
SPSB4-201ENST00000310546 KLRC1P26715 233 aa19.74■□□□□ 0.75
SPSB4-201ENST00000310546 ZSCAN29Q8IWY8 852 aaPredicted RBP19.74■□□□□ 0.75
SPSB4-201ENST00000310546 HPS3Q969F9 1004 aa19.74■□□□□ 0.75
SPSB4-201ENST00000310546 GPR101Q96P66 508 aaPredicted RBP19.74■□□□□ 0.75
SPSB4-201ENST00000310546 SELENOSQ9BQE4 189 aa19.74■□□□□ 0.75
SPSB4-201ENST00000310546 NLRC4Q9NPP4 1024 aa19.74■□□□□ 0.75
SPSB4-201ENST00000310546 HOMER3Q9NSC5 361 aa19.74■□□□□ 0.75
SPSB4-201ENST00000310546 AGAP1Q9UPQ3 857 aa19.74■□□□□ 0.75
SPSB4-201ENST00000310546 COL5A3P25940 1745 aaPredicted RBP19.74■□□□□ 0.75
SPSB4-201ENST00000310546 MYH6P13533 1939 aa19.74■□□□□ 0.75
SPSB4-201ENST00000310546 AKAP11Q9UKA4 1901 aa19.73■□□□□ 0.75
SPSB4-201ENST00000310546 MINDY4BA8MYZ0 360 aa19.73■□□□□ 0.75
SPSB4-201ENST00000310546 ADAMTS3O15072 1205 aa19.73■□□□□ 0.75
SPSB4-201ENST00000310546 MMEP08473 750 aa19.73■□□□□ 0.75
SPSB4-201ENST00000310546 IGHMBP2P38935 993 aaKnown RBP19.73■□□□□ 0.75
SPSB4-201ENST00000310546 UBA7P41226 1012 aa19.73■□□□□ 0.75
SPSB4-201ENST00000310546 CHRNDQ07001 517 aa19.73■□□□□ 0.75
SPSB4-201ENST00000310546 CUL1Q13616 776 aa19.73■□□□□ 0.75
SPSB4-201ENST00000310546 GRIPAP1Q4V328 841 aa19.73■□□□□ 0.75
SPSB4-201ENST00000310546 TRAPPC3LQ5T215 181 aa19.73■□□□□ 0.75
SPSB4-201ENST00000310546 ERMARDQ5T6L9 678 aa19.73■□□□□ 0.75
SPSB4-201ENST00000310546 AGBL2Q5U5Z8 902 aa19.73■□□□□ 0.75
SPSB4-201ENST00000310546 ABCF2Q9UG63 623 aa19.73■□□□□ 0.75
SPSB4-201ENST00000310546 KLRK1P26718 216 aa19.73■□□□□ 0.75
SPSB4-201ENST00000310546 TAF4BQ92750 862 aa19.73■□□□□ 0.75
SPSB4-201ENST00000310546 CORO1CQ9ULV4 474 aaPredicted RBP19.73■□□□□ 0.75
SPSB4-201ENST00000310546 STK38LQ9Y2H1 464 aa19.73■□□□□ 0.75
SPSB4-201ENST00000310546 LONP1P36776 959 aaKnown RBP19.72■□□□□ 0.75
SPSB4-201ENST00000310546 ARID5AQ03989 594 aa19.72■□□□□ 0.75
SPSB4-201ENST00000310546 TRPM8Q7Z2W7 1104 aa19.72■□□□□ 0.75
SPSB4-201ENST00000310546 DDX47Q9H0S4 455 aaKnown RBP19.72■□□□□ 0.75
SPSB4-201ENST00000310546 GOLPH3Q9H4A6 298 aa19.72■□□□□ 0.75
SPSB4-201ENST00000310546 SLC5A4Q9NY91 659 aa19.72■□□□□ 0.75
SPSB4-201ENST00000310546 SAMD15Q9P1V8 674 aa19.72■□□□□ 0.75
SPSB4-201ENST00000310546 SIK3Q9Y2K2 1263 aa19.72■□□□□ 0.75
SPSB4-201ENST00000310546 NHSQ6T4R5 1651 aa19.72■□□□□ 0.75
SPSB4-201ENST00000310546 MPHOSPH10O00566 681 aaKnown RBP19.72■□□□□ 0.75
SPSB4-201ENST00000310546 DAPK3O43293 454 aa19.72■□□□□ 0.75
SPSB4-201ENST00000310546 PRPF3O43395 683 aaKnown RBP19.72■□□□□ 0.75
SPSB4-201ENST00000310546 CHN1P15882 459 aa19.72■□□□□ 0.75
SPSB4-201ENST00000310546 DHX9Q08211 1270 aaKnown RBP19.72■□□□□ 0.75
SPSB4-201ENST00000310546 GNPTABQ3T906 1256 aa19.72■□□□□ 0.75
SPSB4-201ENST00000310546 VWA3BQ502W6 1294 aa19.72■□□□□ 0.75
SPSB4-201ENST00000310546 PARP10Q53GL7 1025 aa19.72■□□□□ 0.75
SPSB4-201ENST00000310546 STAG2Q8N3U4 1231 aa19.72■□□□□ 0.75
SPSB4-201ENST00000310546 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.72■□□□□ 0.75
SPSB4-201ENST00000310546 FAM129AQ9BZQ8 928 aa19.72■□□□□ 0.75
SPSB4-201ENST00000310546 ABCF3Q9NUQ8 709 aa19.72■□□□□ 0.75
SPSB4-201ENST00000310546 TFCP2L1Q9NZI6 479 aa19.72■□□□□ 0.75
SPSB4-201ENST00000310546 ABCC12Q96J65 1359 aa19.72■□□□□ 0.75
SPSB4-201ENST00000310546 A8MUI8 341 aa19.72■□□□□ 0.75
SPSB4-201ENST00000310546 CEP104O60308 925 aa19.72■□□□□ 0.75
SPSB4-201ENST00000310546 VIMP08670 466 aaKnown RBP19.72■□□□□ 0.75
SPSB4-201ENST00000310546 ALDH5A1P51649 535 aaPredicted RBP19.72■□□□□ 0.75
SPSB4-201ENST00000310546 MAP3K12Q12852 859 aa19.72■□□□□ 0.75
SPSB4-201ENST00000310546 SEMA3FQ13275 785 aa19.72■□□□□ 0.75
SPSB4-201ENST00000310546 ZNF268Q14587 947 aaPredicted RBP19.72■□□□□ 0.75
SPSB4-201ENST00000310546 SLMAPQ14BN4 828 aa19.72■□□□□ 0.75
SPSB4-201ENST00000310546 SLC4A8Q2Y0W8 1093 aa19.72■□□□□ 0.75
SPSB4-201ENST00000310546 ERICH1Q86X53 443 aa19.72■□□□□ 0.75
SPSB4-201ENST00000310546 NACAP1Q9BZK3 213 aa19.72■□□□□ 0.75
SPSB4-201ENST00000310546 IRAK4Q9NWZ3 460 aa19.72■□□□□ 0.75
SPSB4-201ENST00000310546 CICQ96RK0 1608 aaPredicted RBP19.71■□□□□ 0.75
SPSB4-201ENST00000310546 SMIM23A6NLE4 172 aa19.71■□□□□ 0.75
SPSB4-201ENST00000310546 SMIM22K7EJ46 135 aa19.71■□□□□ 0.75
SPSB4-201ENST00000310546 SART1O43290 800 aaKnown RBP19.71■□□□□ 0.75
SPSB4-201ENST00000310546 GSTA1P08263 222 aa19.71■□□□□ 0.75
SPSB4-201ENST00000310546 TAF1P21675 1872 aa19.71■□□□□ 0.75
SPSB4-201ENST00000310546 FUT2Q10981 343 aa19.71■□□□□ 0.75
SPSB4-201ENST00000310546 MEI1Q5TIA1 1274 aa19.71■□□□□ 0.75
SPSB4-201ENST00000310546 KIF2BQ8N4N8 673 aa19.71■□□□□ 0.75
SPSB4-201ENST00000310546 NARFQ9UHQ1 456 aa19.71■□□□□ 0.75
SPSB4-201ENST00000310546 CD2APQ9Y5K6 639 aa19.71■□□□□ 0.75
SPSB4-201ENST00000310546 CFAP73A6NFT4 308 aa19.71■□□□□ 0.75
SPSB4-201ENST00000310546 MTMR3Q13615 1198 aa19.71■□□□□ 0.75
SPSB4-201ENST00000310546 KIAA0753Q2KHM9 967 aa19.71■□□□□ 0.75
SPSB4-201ENST00000310546 TRIM68Q6AZZ1 485 aa19.71■□□□□ 0.75
SPSB4-201ENST00000310546 MIGA1Q8NAN2 632 aa19.71■□□□□ 0.75
SPSB4-201ENST00000310546 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.71■□□□□ 0.75
SPSB4-201ENST00000310546 ZNF317Q96PQ6 595 aaPredicted RBP19.71■□□□□ 0.75
SPSB4-201ENST00000310546 TANGO6Q9C0B7 1094 aa19.71■□□□□ 0.75
SPSB4-201ENST00000310546 TLDC2A0PJX2 215 aa19.7■□□□□ 0.74
SPSB4-201ENST00000310546 EVI5O60447 810 aa19.7■□□□□ 0.74
SPSB4-201ENST00000310546 CAND2O75155 1236 aa19.7■□□□□ 0.74
SPSB4-201ENST00000310546 MYBP10242 640 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms