RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 RARS2Q5T160 578 aaKnown RBP16.65■□□□□ 0.26
HCFC1-201ENST00000310441 DTNBP1Q96EV8 351 aa16.65■□□□□ 0.26
HCFC1-201ENST00000310441 SERTAD1Q9UHV2 236 aa16.65■□□□□ 0.26
HCFC1-201ENST00000310441 MYH9P35579 1960 aaKnown RBP16.65■□□□□ 0.26
HCFC1-201ENST00000310441 KPNA7A9QM74 516 aa16.65■□□□□ 0.26
HCFC1-201ENST00000310441 WDR11Q9BZH6 1224 aa16.65■□□□□ 0.26
HCFC1-201ENST00000310441 EPB41L5Q9HCM4 733 aa16.65■□□□□ 0.26
HCFC1-201ENST00000310441 CCNL1Q9UK58 526 aaPredicted RBP16.65■□□□□ 0.26
HCFC1-201ENST00000310441 KCNJ14Q9UNX9 436 aa16.65■□□□□ 0.26
HCFC1-201ENST00000310441 TADA3O75528 432 aa16.64■□□□□ 0.26
HCFC1-201ENST00000310441 SERPING1P05155 500 aa16.64■□□□□ 0.26
HCFC1-201ENST00000310441 PYROXD1Q8WU10 500 aa16.64■□□□□ 0.26
HCFC1-201ENST00000310441 CTDSPL2Q05D32 466 aa16.64■□□□□ 0.25
HCFC1-201ENST00000310441 GYG2O15488 501 aa16.64■□□□□ 0.25
HCFC1-201ENST00000310441 IFNAR2P48551 515 aa16.64■□□□□ 0.25
HCFC1-201ENST00000310441 ANGPTL8Q6UXH0 198 aa16.64■□□□□ 0.25
HCFC1-201ENST00000310441 C19orf44Q9H6X5 657 aa16.64■□□□□ 0.25
HCFC1-201ENST00000310441 CCDC87Q9NVE4 849 aa16.64■□□□□ 0.25
HCFC1-201ENST00000310441 RWDD2AQ9UIY3 292 aa16.64■□□□□ 0.25
HCFC1-201ENST00000310441 ABCC10Q5T3U5 1492 aa16.64■□□□□ 0.25
HCFC1-201ENST00000310441 GPATCH8Q9UKJ3 1502 aaKnown RBP16.64■□□□□ 0.25
HCFC1-201ENST00000310441 ZBTB7BO15156 539 aaPredicted RBP16.64■□□□□ 0.25
HCFC1-201ENST00000310441 GSNP06396 782 aa16.64■□□□□ 0.25
HCFC1-201ENST00000310441 POLR3EQ9NVU0 708 aa16.64■□□□□ 0.25
HCFC1-201ENST00000310441 RHOT2Q8IXI1 618 aa16.64■□□□□ 0.25
HCFC1-201ENST00000310441 DACH2Q96NX9 599 aa16.64■□□□□ 0.25
HCFC1-201ENST00000310441 STAT2P52630 851 aa16.64■□□□□ 0.25
HCFC1-201ENST00000310441 C1orf228Q6PIY5 440 aa16.64■□□□□ 0.25
HCFC1-201ENST00000310441 CCNYQ8ND76 341 aa16.64■□□□□ 0.25
HCFC1-201ENST00000310441 KIF1CO43896 1103 aaKnown RBP16.64■□□□□ 0.25
HCFC1-201ENST00000310441 BRD1O95696 1058 aa16.64■□□□□ 0.25
HCFC1-201ENST00000310441 PLS3P13797 630 aa16.64■□□□□ 0.25
HCFC1-201ENST00000310441 POLE2P56282 527 aa16.64■□□□□ 0.25
HCFC1-201ENST00000310441 DHX9Q08211 1270 aaKnown RBP16.64■□□□□ 0.25
HCFC1-201ENST00000310441 PANX2Q96RD6 677 aa16.64■□□□□ 0.25
HCFC1-201ENST00000310441 CHGBP05060 677 aa16.63■□□□□ 0.25
HCFC1-201ENST00000310441 NR1H4Q96RI1 486 aaPredicted RBP16.63■□□□□ 0.25
HCFC1-201ENST00000310441 KRT1P04264 644 aa16.63■□□□□ 0.25
HCFC1-201ENST00000310441 KRT16P08779 473 aa16.63■□□□□ 0.25
HCFC1-201ENST00000310441 CTSWP56202 376 aa16.63■□□□□ 0.25
HCFC1-201ENST00000310441 SIX6OS1Q8N1H7 587 aa16.63■□□□□ 0.25
HCFC1-201ENST00000310441 FAM227BQ96M60 508 aa16.63■□□□□ 0.25
HCFC1-201ENST00000310441 CYP26B1Q9NR63 512 aa16.63■□□□□ 0.25
HCFC1-201ENST00000310441 LRRC63Q05C16 580 aa16.63■□□□□ 0.25
HCFC1-201ENST00000310441 RNF139Q8WU17 664 aa16.63■□□□□ 0.25
HCFC1-201ENST00000310441 TRPC5Q9UL62 973 aaPredicted RBP16.63■□□□□ 0.25
HCFC1-201ENST00000310441 CCDC188H7C350 402 aa16.63■□□□□ 0.25
HCFC1-201ENST00000310441 FAM47CQ5HY64 1035 aa16.63■□□□□ 0.25
HCFC1-201ENST00000310441 SYMPKQ92797 1274 aaKnown RBP16.63■□□□□ 0.25
HCFC1-201ENST00000310441 FOXP2O15409 715 aa16.63■□□□□ 0.25
HCFC1-201ENST00000310441 BASP1P80723 227 aaKnown RBP16.63■□□□□ 0.25
HCFC1-201ENST00000310441 ZYXQ15942 572 aaKnown RBP16.63■□□□□ 0.25
HCFC1-201ENST00000310441 CERKLQ49MI3 558 aaPredicted RBP16.63■□□□□ 0.25
HCFC1-201ENST00000310441 PNMA1Q8ND90 353 aa16.63■□□□□ 0.25
HCFC1-201ENST00000310441 FLAD1Q8NFF5 587 aa16.63■□□□□ 0.25
HCFC1-201ENST00000310441 ZNF263O14978 683 aa16.63■□□□□ 0.25
HCFC1-201ENST00000310441 SNX2O60749 519 aa16.63■□□□□ 0.25
HCFC1-201ENST00000310441 FAM133BQ5BKY9 247 aaKnown RBP16.63■□□□□ 0.25
HCFC1-201ENST00000310441 FANCBQ8NB91 859 aa16.63■□□□□ 0.25
HCFC1-201ENST00000310441 H0Y626 953 aa16.62■□□□□ 0.25
HCFC1-201ENST00000310441 TRIM16O95361 564 aa16.62■□□□□ 0.25
HCFC1-201ENST00000310441 SOX5P35711 763 aa16.62■□□□□ 0.25
HCFC1-201ENST00000310441 PTGDRQ13258 359 aa16.62■□□□□ 0.25
HCFC1-201ENST00000310441 TCP11X2Q5H9J9 407 aa16.62■□□□□ 0.25
HCFC1-201ENST00000310441 ENAHQ8N8S7 591 aaPredicted RBP16.62■□□□□ 0.25
HCFC1-201ENST00000310441 TCHHQ07283 1943 aa16.62■□□□□ 0.25
HCFC1-201ENST00000310441 GOLGA8IPA6NC78 632 aa16.62■□□□□ 0.25
HCFC1-201ENST00000310441 RASSF10A6NK89 507 aa16.62■□□□□ 0.25
HCFC1-201ENST00000310441 HSPD1P10809 573 aaKnown RBP16.62■□□□□ 0.25
HCFC1-201ENST00000310441 FBXW4P57775 412 aa16.62■□□□□ 0.25
HCFC1-201ENST00000310441 LRRC4Q9HBW1 653 aa16.62■□□□□ 0.25
HCFC1-201ENST00000310441 SEPT9Q9UHD8 586 aaPredicted RBP16.62■□□□□ 0.25
HCFC1-201ENST00000310441 DIABLOQ9NR28 239 aa16.62■□□□□ 0.25
HCFC1-201ENST00000310441 A0A1W2PP64 1363 aa16.62■□□□□ 0.25
HCFC1-201ENST00000310441 FRMD3A2A2Y4 597 aa16.62■□□□□ 0.25
HCFC1-201ENST00000310441 KLRF2D3W0D1 207 aa16.62■□□□□ 0.25
HCFC1-201ENST00000310441 ANO5Q75V66 913 aa16.62■□□□□ 0.25
HCFC1-201ENST00000310441 BAZ2BQ9UIF8 2168 aaKnown RBP16.62■□□□□ 0.25
HCFC1-201ENST00000310441 SF3A3Q12874 501 aaKnown RBP eCLIP16.62■□□□□ 0.254e-8■■■■■ 33.1
HCFC1-201ENST00000310441 TTC13Q8NBP0 860 aa16.62■□□□□ 0.25
HCFC1-201ENST00000310441 FANCLQ9NW38 375 aa16.62■□□□□ 0.25
HCFC1-201ENST00000310441 VGLL3A8MV65 326 aa16.62■□□□□ 0.25
HCFC1-201ENST00000310441 SKOR1P84550 965 aa16.62■□□□□ 0.25
HCFC1-201ENST00000310441 WARS2Q9UGM6 360 aaKnown RBP16.62■□□□□ 0.25
HCFC1-201ENST00000310441 CARMIL3Q8ND23 1372 aa16.62■□□□□ 0.25
HCFC1-201ENST00000310441 ZC3H12BQ5HYM0 836 aaKnown RBP16.62■□□□□ 0.25
HCFC1-201ENST00000310441 ADAT2Q7Z6V5 191 aaKnown RBP16.62■□□□□ 0.25
HCFC1-201ENST00000310441 NOP9Q86U38 636 aaKnown RBP16.62■□□□□ 0.25
HCFC1-201ENST00000310441 CCDC127Q96BQ5 260 aa16.62■□□□□ 0.25
HCFC1-201ENST00000310441 HSPA4LO95757 839 aa16.61■□□□□ 0.25
HCFC1-201ENST00000310441 ZBED1O96006 694 aa16.61■□□□□ 0.25
HCFC1-201ENST00000310441 TIMM10P62072 90 aa16.61■□□□□ 0.25
HCFC1-201ENST00000310441 CAPRIN1Q14444 709 aaKnown RBP16.61■□□□□ 0.25
HCFC1-201ENST00000310441 RNF169Q8NCN4 708 aa16.61■□□□□ 0.25
HCFC1-201ENST00000310441 AMNQ9BXJ7 453 aa16.61■□□□□ 0.25
HCFC1-201ENST00000310441 RNF26Q9BY78 433 aaPredicted RBP16.61■□□□□ 0.25
HCFC1-201ENST00000310441 CEP70Q8NHQ1 597 aa16.61■□□□□ 0.25
HCFC1-201ENST00000310441 RNF217Q8TC41 542 aa16.61■□□□□ 0.25
HCFC1-201ENST00000310441 TRIM62Q9BVG3 475 aa16.61■□□□□ 0.25
HCFC1-201ENST00000310441 EML4Q9HC35 981 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms