RNA–Protein interactions for RNA: ENST00000307972.8

FOXP4-201, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 3,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-201ENST00000307972 SCLT1Q96NL6 688 aa12.84□□□□□ -0.35
FOXP4-201ENST00000307972 DPH5Q9H2P9 285 aa12.84□□□□□ -0.35
FOXP4-201ENST00000307972 CD248Q9HCU0 757 aa12.84□□□□□ -0.35
FOXP4-201ENST00000307972 KLC4Q9NSK0 619 aa12.84□□□□□ -0.35
FOXP4-201ENST00000307972 FAM170AA1A519 330 aa12.84□□□□□ -0.35
FOXP4-201ENST00000307972 PGRMC1O00264 195 aaKnown RBP12.84□□□□□ -0.35
FOXP4-201ENST00000307972 ERVK-9P63128 1117 aa12.84□□□□□ -0.35
FOXP4-201ENST00000307972 CUL1Q13616 776 aa12.84□□□□□ -0.35
FOXP4-201ENST00000307972 CD302Q8IX05 232 aa12.84□□□□□ -0.35
FOXP4-201ENST00000307972 CCDC13Q8IYE1 715 aa12.84□□□□□ -0.35
FOXP4-201ENST00000307972 WDR66Q8TBY9 1149 aa12.84□□□□□ -0.35
FOXP4-201ENST00000307972 INPP4AQ96PE3 977 aaPredicted RBP12.84□□□□□ -0.35
FOXP4-201ENST00000307972 ISCUQ9H1K1 167 aa12.84□□□□□ -0.35
FOXP4-201ENST00000307972 TMBIM4Q9HC24 238 aa12.84□□□□□ -0.35
FOXP4-201ENST00000307972 PCDHA12Q9UN75 941 aa12.84□□□□□ -0.35
FOXP4-201ENST00000307972 USP17L5A8MUK1 530 aa12.84□□□□□ -0.35
FOXP4-201ENST00000307972 SART1O43290 800 aaKnown RBP12.84□□□□□ -0.35
FOXP4-201ENST00000307972 KIF4AO95239 1232 aa12.84□□□□□ -0.35
FOXP4-201ENST00000307972 CCDC172P0C7W6 258 aa12.84□□□□□ -0.35
FOXP4-201ENST00000307972 CDK8P49336 464 aa12.84□□□□□ -0.35
FOXP4-201ENST00000307972 ITGB3BPQ13352 177 aaPredicted RBP12.84□□□□□ -0.35
FOXP4-201ENST00000307972 PPP4R3AQ6IN85 833 aa12.84□□□□□ -0.35
FOXP4-201ENST00000307972 TEX11Q8IYF3 940 aa12.84□□□□□ -0.35
FOXP4-201ENST00000307972 CACNA2D3Q8IZS8 1091 aa12.84□□□□□ -0.35
FOXP4-201ENST00000307972 CCDC26Q8TAB7 109 aa12.84□□□□□ -0.35
FOXP4-201ENST00000307972 SYN2Q92777 582 aaPredicted RBP12.84□□□□□ -0.35
FOXP4-201ENST00000307972 FBXL5Q9UKA1 691 aa12.84□□□□□ -0.35
FOXP4-201ENST00000307972 CACNA1SQ13698 1873 aa12.83□□□□□ -0.35
FOXP4-201ENST00000307972 CHUKO15111 745 aa12.83□□□□□ -0.36
FOXP4-201ENST00000307972 HSPA9P38646 679 aaKnown RBP12.83□□□□□ -0.36
FOXP4-201ENST00000307972 GPBP1Q86WP2 473 aa12.83□□□□□ -0.36
FOXP4-201ENST00000307972 PIK3R5Q8WYR1 880 aa12.83□□□□□ -0.36
FOXP4-201ENST00000307972 PBKQ96KB5 322 aa12.83□□□□□ -0.36
FOXP4-201ENST00000307972 DDX25Q9UHL0 483 aaKnown RBP12.83□□□□□ -0.36
FOXP4-201ENST00000307972 KIAA1024Q9UPX6 916 aa12.83□□□□□ -0.36
FOXP4-201ENST00000307972 PCDHGC5Q9Y5F6 944 aa12.83□□□□□ -0.36
FOXP4-201ENST00000307972 ACTN1P12814 892 aa12.83□□□□□ -0.36
FOXP4-201ENST00000307972 FXR2P51116 673 aaKnown RBP eCLIP12.83□□□□□ -0.36
FOXP4-201ENST00000307972 KCNQ4P56696 695 aa12.83□□□□□ -0.36
FOXP4-201ENST00000307972 KCNH2Q12809 1159 aa12.83□□□□□ -0.36
FOXP4-201ENST00000307972 MTMR3Q13615 1198 aa12.83□□□□□ -0.36
FOXP4-201ENST00000307972 UBE2SQ16763 222 aa12.83□□□□□ -0.36
FOXP4-201ENST00000307972 SMIM5Q71RC9 77 aa12.83□□□□□ -0.36
FOXP4-201ENST00000307972 LMBR1Q8WVP7 490 aa12.83□□□□□ -0.36
FOXP4-201ENST00000307972 CEP95Q96GE4 821 aa12.83□□□□□ -0.36
FOXP4-201ENST00000307972 CXorf56Q9H5V9 222 aa12.83□□□□□ -0.36
FOXP4-201ENST00000307972 PLCB1Q9NQ66 1216 aa12.83□□□□□ -0.36
FOXP4-201ENST00000307972 AMACRQ9UHK6 382 aa12.83□□□□□ -0.36
FOXP4-201ENST00000307972 E9PMD0 336 aa12.83□□□□□ -0.36
FOXP4-201ENST00000307972 RBAK-RBAKDNI3L0D1 243 aa12.83□□□□□ -0.36
FOXP4-201ENST00000307972 FLOT1O75955 427 aa12.83□□□□□ -0.36
FOXP4-201ENST00000307972 NOL4O94818 638 aa12.83□□□□□ -0.36
FOXP4-201ENST00000307972 NR2F2P24468 414 aa12.83□□□□□ -0.36
FOXP4-201ENST00000307972 ALKBH5Q6P6C2 394 aaKnown RBP12.83□□□□□ -0.36
FOXP4-201ENST00000307972 DAAM2Q86T65 1068 aa12.83□□□□□ -0.36
FOXP4-201ENST00000307972 CEP63Q96MT8 703 aa12.83□□□□□ -0.36
FOXP4-201ENST00000307972 SETDB2Q96T68 719 aa12.83□□□□□ -0.36
FOXP4-201ENST00000307972 VCPKMTQ9H867 229 aa12.83□□□□□ -0.36
FOXP4-201ENST00000307972 EMILIN3Q9NT22 766 aa12.83□□□□□ -0.36
FOXP4-201ENST00000307972 TLDC2A0PJX2 215 aa12.82□□□□□ -0.36
FOXP4-201ENST00000307972 DAPK3O43293 454 aa12.82□□□□□ -0.36
FOXP4-201ENST00000307972 NF2P35240 595 aa12.82□□□□□ -0.36
FOXP4-201ENST00000307972 PTK2Q05397 1052 aa12.82□□□□□ -0.36
FOXP4-201ENST00000307972 ACTN3Q08043 901 aaPredicted RBP12.82□□□□□ -0.36
FOXP4-201ENST00000307972 DHX9Q08211 1270 aaKnown RBP12.82□□□□□ -0.36
FOXP4-201ENST00000307972 ORC2Q13416 577 aaPredicted RBP12.82□□□□□ -0.36
FOXP4-201ENST00000307972 LRRC47Q8N1G4 583 aaKnown RBP12.82□□□□□ -0.36
FOXP4-201ENST00000307972 UTP11Q9Y3A2 253 aaKnown RBP12.82□□□□□ -0.36
FOXP4-201ENST00000307972 NOC2LQ9Y3T9 749 aaKnown RBP12.82□□□□□ -0.36
FOXP4-201ENST00000307972 MAGOHP61326 146 aaKnown RBP12.82□□□□□ -0.36
FOXP4-201ENST00000307972 PPP2R2AP63151 447 aa12.82□□□□□ -0.36
FOXP4-201ENST00000307972 BIRC3Q13489 604 aa12.82□□□□□ -0.36
FOXP4-201ENST00000307972 PDIA5Q14554 519 aa12.82□□□□□ -0.36
FOXP4-201ENST00000307972 GKAP1Q5VSY0 366 aaPredicted RBP12.82□□□□□ -0.36
FOXP4-201ENST00000307972 LRIG3Q6UXM1 1119 aa12.82□□□□□ -0.36
FOXP4-201ENST00000307972 MAGOHBQ96A72 148 aaKnown RBP12.82□□□□□ -0.36
FOXP4-201ENST00000307972 MTMR9Q96QG7 549 aa12.82□□□□□ -0.36
FOXP4-201ENST00000307972 SEPT11Q9NVA2 429 aaKnown RBP12.82□□□□□ -0.36
FOXP4-201ENST00000307972 ARMCX3Q9UH62 379 aaPredicted RBP12.82□□□□□ -0.36
FOXP4-201ENST00000307972 ATXN2Q99700 1313 aaKnown RBP12.82□□□□□ -0.36
FOXP4-201ENST00000307972 NPHP3-ACAD11A0A0J9YXS1 232 aa12.82□□□□□ -0.36
FOXP4-201ENST00000307972 SMIM23A6NLE4 172 aa12.82□□□□□ -0.36
FOXP4-201ENST00000307972 FNTAP49354 379 aa12.82□□□□□ -0.36
FOXP4-201ENST00000307972 NT5C2P49902 561 aa12.82□□□□□ -0.36
FOXP4-201ENST00000307972 CLEC4GQ6UXB4 293 aa12.82□□□□□ -0.36
FOXP4-201ENST00000307972 YTHDF3Q7Z739 585 aaKnown RBP12.82□□□□□ -0.36
FOXP4-201ENST00000307972 NT5C3AQ9H0P0 336 aa12.82□□□□□ -0.36
FOXP4-201ENST00000307972 HDAC9Q9UKV0 1011 aa12.82□□□□□ -0.36
FOXP4-201ENST00000307972 USP11P51784 963 aa12.81□□□□□ -0.36
FOXP4-201ENST00000307972 EXOC3L4Q17RC7 722 aa12.81□□□□□ -0.36
FOXP4-201ENST00000307972 ARHGAP27Q6ZUM4 889 aa12.81□□□□□ -0.36
FOXP4-201ENST00000307972 ADAT2Q7Z6V5 191 aaKnown RBP12.81□□□□□ -0.36
FOXP4-201ENST00000307972 DHX37Q8IY37 1157 aaKnown RBP12.81□□□□□ -0.36
FOXP4-201ENST00000307972 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.81□□□□□ -0.36
FOXP4-201ENST00000307972 SELENOSQ9BQE4 189 aa12.81□□□□□ -0.36
FOXP4-201ENST00000307972 ACTR5Q9H9F9 607 aaPredicted RBP12.81□□□□□ -0.36
FOXP4-201ENST00000307972 SLC40A1Q9NP59 571 aa12.81□□□□□ -0.36
FOXP4-201ENST00000307972 ATP8A1Q9Y2Q0 1164 aa12.81□□□□□ -0.36
FOXP4-201ENST00000307972 ITGB4P16144 1822 aa12.81□□□□□ -0.36
FOXP4-201ENST00000307972 H2AFZP0C0S5 128 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms