RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 FOXP2O15409 715 aa14.66□□□□□ -0.06
SEC23A-201ENST00000307712 UFL1O94874 794 aa14.66□□□□□ -0.06
SEC23A-201ENST00000307712 PLA2G4BP0C869 781 aa14.66□□□□□ -0.06
SEC23A-201ENST00000307712 PSMD2Q13200 908 aa14.66□□□□□ -0.06
SEC23A-201ENST00000307712 ZNF211Q13398 564 aaPredicted RBP14.66□□□□□ -0.06
SEC23A-201ENST00000307712 ERFEQ4G0M1 354 aa14.66□□□□□ -0.06
SEC23A-201ENST00000307712 METTL14Q9HCE5 456 aaKnown RBP14.66□□□□□ -0.06
SEC23A-201ENST00000307712 BARHL2Q9NY43 387 aa14.66□□□□□ -0.06
SEC23A-201ENST00000307712 GCNT4Q9P109 453 aa14.66□□□□□ -0.06
SEC23A-201ENST00000307712 SUFUQ9UMX1 484 aa14.66□□□□□ -0.06
SEC23A-201ENST00000307712 NOC2LQ9Y3T9 749 aaKnown RBP14.66□□□□□ -0.06
SEC23A-201ENST00000307712 CEP83Q9Y592 693 aa14.66□□□□□ -0.06
SEC23A-201ENST00000307712 GRID2IPA4D2P6 1211 aa14.66□□□□□ -0.06
SEC23A-201ENST00000307712 TPH2Q8IWU9 490 aa14.66□□□□□ -0.06
SEC23A-201ENST00000307712 ARHGEF2Q92974 986 aaKnown RBP14.66□□□□□ -0.06
SEC23A-201ENST00000307712 MLXIPLQ9NP71 852 aa14.66□□□□□ -0.06
SEC23A-201ENST00000307712 KDM6AO15550 1401 aaPredicted RBP14.65□□□□□ -0.06
SEC23A-201ENST00000307712 RASGRF2O14827 1237 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 PRPF6O94906 941 aaKnown RBP14.65□□□□□ -0.06
SEC23A-201ENST00000307712 TDP2O95551 362 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 GBP1P32455 592 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 SLC16A2P36021 539 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 PBX1P40424 430 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 ZNF131P52739 623 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 SEC23AQ15436 765 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 TMEM132AQ24JP5 1023 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 CREG2Q8IUH2 290 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 AENQ8WTP8 325 aaKnown RBP14.65□□□□□ -0.06
SEC23A-201ENST00000307712 CASKIN2Q8WXE0 1202 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 RUBCNQ92622 972 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 DNAJC17Q9NVM6 304 aaKnown RBP14.65□□□□□ -0.06
SEC23A-201ENST00000307712 GGT7Q9UJ14 662 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 MYMKA6NI61 221 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 E9PMD0 336 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 FERP16591 822 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 KRT15P19012 456 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 ELF1P32519 619 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 EIF3BP55884 814 aaKnown RBP14.65□□□□□ -0.06
SEC23A-201ENST00000307712 COASYQ13057 564 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 WDR59Q6PJI9 974 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 CCDC13Q8IYE1 715 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 YY1AP1Q9H869 796 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 IKBKGQ9Y6K9 419 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 ZNF804BA4D1E1 1349 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 SSU72P8A0A1W2PR75 194 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 TCRBV5S4A2TA0A5A2 114 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 WNT7AO00755 349 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 FAM153BP0C7A2 387 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 KRT5P13647 590 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 BTDP43251 543 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 CDC37Q16543 378 aaPredicted RBP14.65□□□□□ -0.06
SEC23A-201ENST00000307712 FAM153CQ494X1 144 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 NUGGCQ68CJ6 796 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 DPP8Q6V1X1 898 aaPredicted RBP14.65□□□□□ -0.06
SEC23A-201ENST00000307712 MSL3Q8N5Y2 521 aaKnown RBP14.65□□□□□ -0.06
SEC23A-201ENST00000307712 THOC1Q96FV9 657 aaKnown RBP14.65□□□□□ -0.06
SEC23A-201ENST00000307712 CHMP6Q96FZ7 201 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 SEC16BQ96JE7 1060 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 FAM153AQ9UHL3 310 aa14.65□□□□□ -0.06
SEC23A-201ENST00000307712 BCRP11274 1271 aa14.64□□□□□ -0.07
SEC23A-201ENST00000307712 SLC18A3Q16572 532 aa14.64□□□□□ -0.07
SEC23A-201ENST00000307712 KDM7AQ6ZMT4 941 aa14.64□□□□□ -0.07
SEC23A-201ENST00000307712 CAPN12Q6ZSI9 719 aa14.64□□□□□ -0.07
SEC23A-201ENST00000307712 MTMR8Q96EF0 704 aa14.64□□□□□ -0.07
SEC23A-201ENST00000307712 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.64□□□□□ -0.074e-34■■□□□ 12.6
SEC23A-201ENST00000307712 EIF4E1BA6NMX2 242 aaKnown RBP14.64□□□□□ -0.07
SEC23A-201ENST00000307712 TTI1O43156 1089 aa14.64□□□□□ -0.07
SEC23A-201ENST00000307712 GDAP1Q8TB36 358 aa14.64□□□□□ -0.07
SEC23A-201ENST00000307712 C7orf25Q9BPX7 421 aa14.64□□□□□ -0.07
SEC23A-201ENST00000307712 TBK1Q9UHD2 729 aa14.64□□□□□ -0.07
SEC23A-201ENST00000307712 TMEM94Q12767 1356 aa14.64□□□□□ -0.07
SEC23A-201ENST00000307712 MXRA7P84157 204 aa14.64□□□□□ -0.07
SEC23A-201ENST00000307712 C10orf76Q5T2E6 689 aa14.64□□□□□ -0.07
SEC23A-201ENST00000307712 RAD54LQ92698 747 aa14.64□□□□□ -0.07
SEC23A-201ENST00000307712 TRIM6Q9C030 488 aaPredicted RBP14.64□□□□□ -0.07
SEC23A-201ENST00000307712 A0A1W2PQJ5 194 aa14.64□□□□□ -0.07
SEC23A-201ENST00000307712 ATP2A1O14983 1001 aa14.64□□□□□ -0.07
SEC23A-201ENST00000307712 THAP12O43422 761 aa14.64□□□□□ -0.07
SEC23A-201ENST00000307712 ORC4O43929 436 aa14.64□□□□□ -0.07
SEC23A-201ENST00000307712 CYP19A1P11511 503 aaPredicted RBP14.64□□□□□ -0.07
SEC23A-201ENST00000307712 PPP4R3AQ6IN85 833 aa14.64□□□□□ -0.07
SEC23A-201ENST00000307712 SPATA20Q8TB22 786 aa14.64□□□□□ -0.07
SEC23A-201ENST00000307712 LOC102724428A0A0B4J2F2 783 aa14.63□□□□□ -0.07
SEC23A-201ENST00000307712 ACSL3O95573 720 aa14.63□□□□□ -0.07
SEC23A-201ENST00000307712 LMNB1P20700 586 aa14.63□□□□□ -0.07
SEC23A-201ENST00000307712 KCNQ4P56696 695 aa14.63□□□□□ -0.07
SEC23A-201ENST00000307712 SIK1P57059 783 aa14.63□□□□□ -0.07
SEC23A-201ENST00000307712 SESN3P58005 492 aa14.63□□□□□ -0.07
SEC23A-201ENST00000307712 SNX1Q13596 522 aa14.63□□□□□ -0.07
SEC23A-201ENST00000307712 PROM2Q8N271 834 aa14.63□□□□□ -0.07
SEC23A-201ENST00000307712 MDM1Q8TC05 714 aa14.63□□□□□ -0.07
SEC23A-201ENST00000307712 GAS8O95995 478 aa14.63□□□□□ -0.07
SEC23A-201ENST00000307712 ACTN1P12814 892 aa14.63□□□□□ -0.07
SEC23A-201ENST00000307712 HSD17B3P37058 310 aa14.63□□□□□ -0.07
SEC23A-201ENST00000307712 GRM4Q14833 912 aa14.63□□□□□ -0.07
SEC23A-201ENST00000307712 UAP1Q16222 522 aaPredicted RBP14.63□□□□□ -0.07
SEC23A-201ENST00000307712 NBPF9Q3BBW0 867 aa14.63□□□□□ -0.07
SEC23A-201ENST00000307712 CCDC38Q502W7 563 aa14.63□□□□□ -0.07
SEC23A-201ENST00000307712 C6orf163Q5TEZ5 329 aa14.63□□□□□ -0.07
SEC23A-201ENST00000307712 TMED8Q6PL24 325 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms