RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 EPS15L1Q9UBC2 864 aa13.64□□□□□ -0.23
USP38-201ENST00000307017 SNX24Q9Y343 169 aa13.64□□□□□ -0.23
USP38-201ENST00000307017 KDM5BQ9UGL1 1544 aa13.64□□□□□ -0.23
USP38-201ENST00000307017 ECEL1O95672 775 aa13.64□□□□□ -0.23
USP38-201ENST00000307017 PDE6AP16499 860 aa13.64□□□□□ -0.23
USP38-201ENST00000307017 CACNB2Q08289 660 aaPredicted RBP13.64□□□□□ -0.23
USP38-201ENST00000307017 ZMYND12Q9H0C1 365 aa13.64□□□□□ -0.23
USP38-201ENST00000307017 ECT2Q9H8V3 914 aa13.64□□□□□ -0.23
USP38-201ENST00000307017 PPARGC1AQ9UBK2 798 aaKnown RBP13.64□□□□□ -0.23
USP38-201ENST00000307017 KIF21AQ7Z4S6 1674 aa13.64□□□□□ -0.23
USP38-201ENST00000307017 EVI5O60447 810 aa13.64□□□□□ -0.23
USP38-201ENST00000307017 STX1BP61266 288 aa13.64□□□□□ -0.23
USP38-201ENST00000307017 PPP6R3Q5H9R7 873 aaPredicted RBP13.64□□□□□ -0.23
USP38-201ENST00000307017 DTX3LQ8TDB6 740 aa13.64□□□□□ -0.23
USP38-201ENST00000307017 HOOK2Q96ED9 719 aa13.64□□□□□ -0.23
USP38-201ENST00000307017 RPGRIP1Q96KN7 1286 aa13.64□□□□□ -0.23
USP38-201ENST00000307017 FAM118BQ9BPY3 351 aa13.64□□□□□ -0.23
USP38-201ENST00000307017 DR1Q01658 176 aa13.64□□□□□ -0.23
USP38-201ENST00000307017 FAM26FQ5R3K3 315 aa13.64□□□□□ -0.23
USP38-201ENST00000307017 ZBTB24O43167 697 aaPredicted RBP13.64□□□□□ -0.23
USP38-201ENST00000307017 ATP2B4P23634 1241 aa13.64□□□□□ -0.23
USP38-201ENST00000307017 CACNB3P54284 484 aa13.64□□□□□ -0.23
USP38-201ENST00000307017 RSRC2Q7L4I2 434 aaKnown RBP13.64□□□□□ -0.23
USP38-201ENST00000307017 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.64□□□□□ -0.23
USP38-201ENST00000307017 GABPB2Q8TAK5 448 aaPredicted RBP13.64□□□□□ -0.23
USP38-201ENST00000307017 FAF2Q96CS3 445 aa13.64□□□□□ -0.23
USP38-201ENST00000307017 LSG1Q9H089 658 aaKnown RBP13.64□□□□□ -0.23
USP38-201ENST00000307017 KMT5AQ9NQR1 393 aa13.64□□□□□ -0.23
USP38-201ENST00000307017 DDAH1O94760 285 aa13.63□□□□□ -0.23
USP38-201ENST00000307017 PPP1R2P41236 205 aa13.63□□□□□ -0.23
USP38-201ENST00000307017 SPATS2Q86XZ4 545 aaKnown RBP13.63□□□□□ -0.23
USP38-201ENST00000307017 RPS6KC1Q96S38 1066 aa13.63□□□□□ -0.23
USP38-201ENST00000307017 TTC1Q99614 292 aa13.63□□□□□ -0.23
USP38-201ENST00000307017 PFKFB2O60825 505 aa13.63□□□□□ -0.23
USP38-201ENST00000307017 MMEP08473 750 aa13.63□□□□□ -0.23
USP38-201ENST00000307017 PUS7LQ9H0K6 701 aaKnown RBP13.63□□□□□ -0.23
USP38-201ENST00000307017 HESX1Q9UBX0 185 aa13.63□□□□□ -0.23
USP38-201ENST00000307017 UGGT2Q9NYU1 1516 aa13.63□□□□□ -0.23
USP38-201ENST00000307017 PALM3A6NDB9 673 aaPredicted RBP13.63□□□□□ -0.23
USP38-201ENST00000307017 CMA1P23946 247 aa13.63□□□□□ -0.23
USP38-201ENST00000307017 FBXW4P57775 412 aa13.63□□□□□ -0.23
USP38-201ENST00000307017 GRAMD4Q6IC98 578 aa13.63□□□□□ -0.23
USP38-201ENST00000307017 NFRKBQ6P4R8 1299 aa13.63□□□□□ -0.23
USP38-201ENST00000307017 FBXL13Q8NEE6 735 aa13.63□□□□□ -0.23
USP38-201ENST00000307017 MAIP1Q8WWC4 291 aa13.63□□□□□ -0.23
USP38-201ENST00000307017 POLR3CQ9BUI4 534 aaPredicted RBP13.63□□□□□ -0.23
USP38-201ENST00000307017 GDAQ9Y2T3 454 aa13.63□□□□□ -0.23
USP38-201ENST00000307017 PCDHA1Q9Y5I3 950 aa13.63□□□□□ -0.23
USP38-201ENST00000307017 SYCP2Q9BX26 1530 aa13.63□□□□□ -0.23
USP38-201ENST00000307017 TLR3O15455 904 aaKnown RBP13.63□□□□□ -0.23
USP38-201ENST00000307017 NLRP4Q96MN2 994 aa13.63□□□□□ -0.23
USP38-201ENST00000307017 PALMDQ9NP74 551 aa13.63□□□□□ -0.23
USP38-201ENST00000307017 BCAP29Q9UHQ4 241 aa13.63□□□□□ -0.23
USP38-201ENST00000307017 PRAG1Q86YV5 1406 aa13.63□□□□□ -0.23
USP38-201ENST00000307017 NMT2O60551 498 aa13.63□□□□□ -0.23
USP38-201ENST00000307017 MAP3K21Q5TCX8 1036 aa13.63□□□□□ -0.23
USP38-201ENST00000307017 SMARCAL1Q9NZC9 954 aa13.63□□□□□ -0.23
USP38-201ENST00000307017 V9GYQ6 96 aa13.63□□□□□ -0.23
USP38-201ENST00000307017 IFT140Q96RY7 1462 aa13.63□□□□□ -0.23
USP38-201ENST00000307017 KCNA6P17658 529 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 PLCG1P19174 1290 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 FBXW10Q5XX13 1052 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 EFCAB13Q8IY85 973 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 ENOX1Q8TC92 643 aaKnown RBP13.62□□□□□ -0.23
USP38-201ENST00000307017 NT5C3AQ9H0P0 336 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 YY1AP1Q9H869 796 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 H7C1D1 291 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 TBC1D12O60347 775 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 FGGP02679 453 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 MAGOHP61326 146 aaKnown RBP13.62□□□□□ -0.23
USP38-201ENST00000307017 PSMC5P62195 406 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 FAM186BQ8IYM0 893 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 CDKL2Q92772 493 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 MCF2LO15068 1137 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 CREB3O43889 395 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 PLEKHA8P1O95397 391 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 RAB44Q7Z6P3 723 aaPredicted RBP13.62□□□□□ -0.23
USP38-201ENST00000307017 ZBTB8OSQ8IWT0 167 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 DSCC1Q9BVC3 393 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 GOLPH3LQ9H4A5 285 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 FAM196BA6NMK8 535 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 DKC1O60832 514 aaKnown RBP eCLIP13.62□□□□□ -0.23
USP38-201ENST00000307017 MCF2P10911 925 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 PTK2Q05397 1052 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 POU5F1BQ06416 359 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 SPIRE2Q8WWL2 714 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 MED23Q9ULK4 1368 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 SNAP23O00161 211 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 WBP4O75554 376 aaKnown RBP13.62□□□□□ -0.23
USP38-201ENST00000307017 ICA1Q05084 483 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 CYTH1Q15438 398 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 LARP4BQ92615 738 aaKnown RBP13.62□□□□□ -0.23
USP38-201ENST00000307017 OSBPL1AQ9BXW6 950 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 SLFN14P0C7P3 912 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 LCORLQ8N3X6 602 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 IP6K1Q92551 441 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 SPC25Q9HBM1 224 aa13.62□□□□□ -0.23
USP38-201ENST00000307017 APBA3O96018 575 aa13.61□□□□□ -0.23
USP38-201ENST00000307017 MYBL1P10243 752 aa13.61□□□□□ -0.23
USP38-201ENST00000307017 TCP1P17987 556 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms